Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120445.Seq
(784 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_02_0031 + 8874025-8874180,8882152-8882550,8882651-8882987,888... 77 1e-14
07_01_1177 + 11125945-11126242,11126465-11128303,11128342-11128358 75 5e-14
12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749 75 6e-14
01_05_0320 - 20874691-20875230,20879337-20879590,20880014-208810... 70 2e-12
05_03_0207 + 10103831-10104451 65 5e-11
05_03_0260 - 11200887-11200907,11200979-11201961,11212201-11212390 60 2e-09
09_02_0336 - 7397745-7398308,7398813-7400723 48 8e-06
10_05_0068 + 8774712-8774787,8774812-8774852,8774895-8775743,877... 45 6e-05
02_05_0338 - 28084169-28084366,28084414-28085225,28085565-280855... 41 0.001
01_05_0175 - 18936752-18937621,18938855-18941641 31 1.4
06_03_0493 + 21402536-21404599 29 3.2
06_03_0785 - 24563310-24565004,24565302-24565384,24565484-245660... 29 5.5
02_05_0739 + 31401372-31402371,31402667-31402719 29 5.5
>04_02_0031 +
8874025-8874180,8882152-8882550,8882651-8882987,
8883234-8884060
Length = 572
Score = 77.4 bits (182), Expect = 1e-14
Identities = 49/165 (29%), Positives = 80/165 (48%)
Frame = +2
Query: 5 NCIESKMTNVPFKNNRTKTNEILELIHTDLNGPHSTTGYGGEKYFFDLY**L**MYKNFL 184
+C+ KMT PF + +E+L L+HTD+ GP S+T GG YF +L
Sbjct: 404 SCLLGKMTKAPFTGQSERASELLGLVHTDICGPMSSTAKGGFGYFITFTDDFSRYGYVYL 463
Query: 185 Y*K*SRNCKLFYRIC*FSRK*I**RVKKLQCDNGKEYLNRDIYDFIGHKGIELLPCPPYV 364
S + + F + + + K L+ D G EYL+ + + + GI PP
Sbjct: 464 MRHKSESFEKFKKFQNEVQNHLGKTTKYLRSDCGGEYLSLEFGNHLKKCGIAPQFTPPGT 523
Query: 365 HELNGVAERYNRSAMDIGRCLMREAKIHRRYWPEVIKTAAYLKNR 499
+ NGV+ER NR+ +D+ R +M + + +W ++TA + NR
Sbjct: 524 PQWNGVSERRNRTLLDMVRSMMSQTDLSLSFWSYALETAVFTLNR 568
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +3
Query: 138 FLTFIDDYSKCTRIFCIKSKAETASCFIEFVNLVENKFNK 257
F+TF DD+S+ ++ ++ K+E+ F +F N V+N K
Sbjct: 448 FITFTDDFSRYGYVYLMRHKSESFEKFKKFQNEVQNHLGK 487
>07_01_1177 + 11125945-11126242,11126465-11128303,11128342-11128358
Length = 717
Score = 75.4 bits (177), Expect = 5e-14
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Frame = +2
Query: 5 NCIESKMTNVPFKNNRTKTNEILELIHTDLNGPHSTTGYGGEKYFFDLY**L**-MYKNF 181
+C+ K V F + +T IL+ +H DL GP GG +Y + ++ F
Sbjct: 389 HCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYF 448
Query: 182 LY*K*SRNCKLFYRIC*FSRK*I**RVKKLQCDNGKEYLNRDIYDFIGHKGIELLPCPPY 361
L K F + VK L+ DNG E+ + D+ +GI PY
Sbjct: 449 LKHK-DDTFAAFKEWKVMIERQTEKEVKVLRTDNGGEFCSDAFDDYCRKEGIVRHHTIPY 507
Query: 362 VHELNGVAERYNRSAMDIGRCLMREAKIHRRYWPEVIKTAAYLKNRTIAI 511
+ NGVAER NR+ + C++ A++++R+W E TA YL NR+ +I
Sbjct: 508 TPQQNGVAERMNRTIISKAHCMLSNARMNKRFWAEAANTACYLINRSPSI 557
Score = 32.7 bits (71), Expect = 0.34
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 141 LTFIDDYSKCTRIFCIKSKAETASCFIEFVNLVENKFNKELR 266
LT IDDYS+ + +K K +T + F E+ ++E + KE++
Sbjct: 434 LTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIERQTEKEVK 475
>12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749
Length = 587
Score = 74.9 bits (176), Expect = 6e-14
Identities = 47/164 (28%), Positives = 77/164 (46%)
Frame = +2
Query: 8 CIESKMTNVPFKNNRTKTNEILELIHTDLNGPHSTTGYGGEKYFFDLY**L**MYKNFLY 187
C++SK P K + + LEL+H+DL +S GG+KYF L +L
Sbjct: 185 CVQSKQPRKPHKASEARNLAPLELVHSDLCEMNSVLTKGGKKYFMTLTDDCTRFCYVYLL 244
Query: 188 *K*SRNCKLFYRIC*FSRK*I**RVKKLQCDNGKEYLNRDIYDFIGHKGIELLPCPPYVH 367
+ F + ++K+L+ D G+EY + + F GI PPY+
Sbjct: 245 KRKDEALHYFKIYKAEVENQLERKIKRLRSDRGREYFSNEFASFCEEFGIIHERTPPYLP 304
Query: 368 ELNGVAERYNRSAMDIGRCLMREAKIHRRYWPEVIKTAAYLKNR 499
+ NGVAER NR+ +I ++ + + +W E + TA Y+ N+
Sbjct: 305 QSNGVAERKNRTLAEIVNAMLDTTGLCKEWWGEAVLTACYVLNK 348
>01_05_0320 -
20874691-20875230,20879337-20879590,20880014-20881087,
20881259-20881511,20881548-20882369
Length = 980
Score = 69.7 bits (163), Expect = 2e-12
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 1/165 (0%)
Frame = +2
Query: 8 CIESKMTNVPFKNNRTKTNEILELIHTDLNGPHSTTGYGGEKYFFDLY**L**MYKNFLY 187
C++SK P K + + LEL+H+DL + GG+KYF L +L
Sbjct: 365 CVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLL 424
Query: 188 *K*SRNCKLFYRIC*FS-RK*I**RVKKLQCDNGKEYLNRDIYDFIGHKGIELLPCPPYV 364
K +++I + ++K+L+ D G EY + + F GI PPY
Sbjct: 425 -KTKDEALHYFKIYRAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMTPPYS 483
Query: 365 HELNGVAERYNRSAMDIGRCLMREAKIHRRYWPEVIKTAAYLKNR 499
+ NGVAER NR+ ++ ++ A + + +W E + TA ++ N+
Sbjct: 484 PQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVLTACHVLNK 528
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 129 KNIFLTFIDDYSKCTRIFCIKSKAETASCFIEFVNLVENKFNKELR 266
K F+T IDD ++ ++ +K+K E F + VEN+ ++++
Sbjct: 405 KKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYRAEVENQLERKIK 450
>05_03_0207 + 10103831-10104451
Length = 206
Score = 65.3 bits (152), Expect = 5e-11
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 3/162 (1%)
Frame = +2
Query: 23 MTNVPFKNNRTKTNEILELIHTDLNGPHSTTGYGGEKYFFDLY**L**MYKNFLY*K*SR 202
MT PF + +E+L L+HTD+ GP S+T G YF +L S
Sbjct: 1 MTKAPFTGQSERASELLGLVHTDVCGPMSSTARCGFGYFITFTDDFSRYGYIYLMRHKSE 60
Query: 203 NCKLFYRIC*FSRK*I**RVKKLQCDNGKEYLNRDIYDFIGH-KGIELLP--CPPYVHEL 373
+ + F + + +K L+ D EYL+ +F H K E++P PP +
Sbjct: 61 SFEKFKEFQNEVQNHLGKTIKYLRSDLSGEYLS---LEFCNHLKECEIVPQLTPPGTPQW 117
Query: 374 NGVAERYNRSAMDIGRCLMREAKIHRRYWPEVIKTAAYLKNR 499
NGV+ER NR+ +D+ R +M + + +W + TAA+ NR
Sbjct: 118 NGVSERRNRTLLDMVRSMMSQTDLPLSFWDYALGTAAFTLNR 159
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +3
Query: 138 FLTFIDDYSKCTRIFCIKSKAETASCFIEFVNLVENKFNKELR 266
F+TF DD+S+ I+ ++ K+E+ F EF N V+N K ++
Sbjct: 39 FITFTDDFSRYGYIYLMRHKSESFEKFKEFQNEVQNHLGKTIK 81
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +1
Query: 520 NKTPYEIFFGIKPNVEHLKIYGSKVYVR 603
+KT YEI+ G +P++ LKI+G +VYV+
Sbjct: 166 DKTLYEIWTGKRPSLSFLKIWGCEVYVK 193
>05_03_0260 - 11200887-11200907,11200979-11201961,11212201-11212390
Length = 397
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/80 (32%), Positives = 46/80 (57%)
Frame = +2
Query: 260 VKKLQCDNGKEYLNRDIYDFIGHKGIELLPCPPYVHELNGVAERYNRSAMDIGRCLMREA 439
+K+++ DNG+E+ N + +F+ +GI+ PY NG+ ER NR+ ++ R ++ E
Sbjct: 83 IKRVRSDNGEEFKNTQVEEFLDEEGIKHEFSAPYDPPQNGIVERKNRTLIEAARAMLDEY 142
Query: 440 KIHRRYWPEVIKTAAYLKNR 499
K +W E + TA + NR
Sbjct: 143 KTSDVFWVEAVSTACHAINR 162
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +1
Query: 508 YTVENKTPYEIFFGIKPNVEHLKIYGSKVYVRVPEVLRKSKWDDKAQLGVLVGYTEN--G 681
+ + KT YE+ G KPNV + ++GSK ++ + + R SK+ K G L+GY N
Sbjct: 166 HKILKKTSYELLSGKKPNVSYFHVFGSKCFI-LSKRPRSSKFSPKVDEGFLLGYESNAHA 224
Query: 682 YRVY 693
YRV+
Sbjct: 225 YRVF 228
>09_02_0336 - 7397745-7398308,7398813-7400723
Length = 824
Score = 48.0 bits (109), Expect = 8e-06
Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 12/176 (6%)
Frame = +2
Query: 8 CIESKMTNVPFKNNRTKTNEILELIHTDLNGPH---STTGYGGEKYFFDLY**L**MYKN 178
CI+ K K ++ ILE+IHTD+ GP S GY F D Y +Y
Sbjct: 202 CIKGKFVK-SIKKGAKRSAGILEIIHTDICGPFPVKSVDGYDSFITFTDDYSRYGYIYPI 260
Query: 179 FLY*K*SRNCKLFYRIC*FSRK*I**RVKKLQCDNGKEYLNRDI-YD--------FIGHK 331
+ K+F ++ I ++K ++ D G EY R Y F+
Sbjct: 261 KERLEALDKFKIFKAEV-ENQHDI--KIKVVRSDRGGEYYGRHTPYGQVPGPFARFLLEN 317
Query: 332 GIELLPCPPYVHELNGVAERYNRSAMDIGRCLMREAKIHRRYWPEVIKTAAYLKNR 499
GI P + NGVAER NR+ MD+ R +M + + W E +KTA ++ NR
Sbjct: 318 GIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNR 373
Score = 35.9 bits (79), Expect = 0.036
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 523 KTPYEIFFGIKPNVEHLKIYGSKVYVRVPEVLRKSKWDDKAQLGVLVGYTE--NGYRVY 693
KTPYE++ G P++ HL+++GS +V K D K + Y E GYR Y
Sbjct: 381 KTPYELWTGRVPSLTHLRVWGSPTEAKVFN-SNIGKLDPKTVSCHFISYPERSKGYRFY 438
Score = 31.9 bits (69), Expect = 0.59
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 138 FLTFIDDYSKCTRIFCIKSKAETASCFIEFVNLVENKFNKELR 266
F+TF DDYS+ I+ IK + E F F VEN+ + +++
Sbjct: 244 FITFTDDYSRYGYIYPIKERLEALDKFKIFKAEVENQHDIKIK 286
>10_05_0068 +
8774712-8774787,8774812-8774852,8774895-8775743,
8776210-8776582,8776814-8777484
Length = 669
Score = 45.2 bits (102), Expect = 6e-05
Identities = 36/137 (26%), Positives = 58/137 (42%)
Frame = +2
Query: 5 NCIESKMTNVPFKNNRTKTNEILELIHTDLNGPHSTTGYGGEKYFFDLY**L**MYKNFL 184
+C++SK P K + + LEL+H+DL + GG++YF L +L
Sbjct: 186 SCVQSKQPRKPHKAAKERNLAPLELLHSDLCEMNGVFTKGGKRYFMTLIDDATRFCSVYL 245
Query: 185 Y*K*SRNCKLFYRIC*FSRK*I**RVKKLQCDNGKEYLNRDIYDFIGHKGIELLPCPPYV 364
F + ++K+L+ D G E+ + + F GI Y
Sbjct: 246 LKSKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTSLYS 305
Query: 365 HELNGVAERYNRSAMDI 415
E NG+AER NR+ D+
Sbjct: 306 PESNGIAERKNRTLTDL 322
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 129 KNIFLTFIDDYSKCTRIFCIKSKAETASCFIEFVNLVENKFNKELR 266
K F+T IDD ++ ++ +KSK E F + VEN+ +++++
Sbjct: 227 KRYFMTLIDDATRFCSVYLLKSKDEALDYFKIYKAEVENQLDRKIK 272
>02_05_0338 -
28084169-28084366,28084414-28085225,28085565-28085595,
28085638-28086214,28086439-28087145,28087188-28087228,
28087253-28087366,28087517-28088108
Length = 1023
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +1
Query: 517 ENKTPYEIFFGIKPNVEHLKIYGSKVYVRVPEVLRKSKWDDKAQLGVLVGYTEN 678
++KTPYEI+ G KP++ +L+ +G V VP + +K K K V +GY +
Sbjct: 491 KDKTPYEIWIGRKPSLSYLRTWGCLAKVNVP-ITKKRKLGPKTVDCVFLGYAHH 543
Score = 34.7 bits (76), Expect = 0.084
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 5 NCIESKMTNVPFKNNRTKTNEILELIHTDLNGPHSTTGYGGEKYFFDL 148
+C++SK P K + LEL+H+DL + GG++YF L
Sbjct: 396 SCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTL 443
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +3
Query: 129 KNIFLTFIDDYSKCTRIFCIKSKAETASCFIEFVNLVENKFNKELR 266
K F+T IDD ++ ++ +K+K E F + VEN+ +++++
Sbjct: 437 KRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 482
>01_05_0175 - 18936752-18937621,18938855-18941641
Length = 1218
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 413 IGRCLMREAKIHRRYWPEVIKTAAYLKNRTIAI 511
IGRC + R+WP++ + Y++ R +AI
Sbjct: 282 IGRCGVYRISFSARFWPKMDRALDYMRERRVAI 314
>06_03_0493 + 21402536-21404599
Length = 687
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = -1
Query: 721 CLALIILLFNKLYNHSQCTLPTLLVGLYRPIYFSLKLLEPLHR 593
CLA +L ++LY HS+ L + LV L RP + + L++ LHR
Sbjct: 69 CLAAHLLARDRLYAHSRRVL-SRLVALRRP-HLAASLVDLLHR 109
>06_03_0785 -
24563310-24565004,24565302-24565384,24565484-24566039,
24566397-24566513,24566565-24567131,24568632-24568702,
24569833-24569903,24570270-24570441,24571229-24572212,
24573128-24574808
Length = 1998
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 481 SIFKKSNNCYTVENKTPYEIFFGIKPNVEHLKIYGSKV 594
++ + CY VE P EIF P V+HL I +V
Sbjct: 522 AVHVSNGKCYRVEANEPQEIF----PEVQHLSILAERV 555
>02_05_0739 + 31401372-31402371,31402667-31402719
Length = 350
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 263 KKLQCDNGKEYLNRDIYDFIGHKGIELLPCPPYVHELNGVAERYNRSAMD-IGRCLMREA 439
K++ CDNGK++ + D +++ + NG ER N M+ I + L A
Sbjct: 133 KEIVCDNGKQFESGKFQDMCKGLNLQINFASVGHPQTNGAVERANGKIMEAIKKRLEGSA 192
Query: 440 KIHRRYWPEVIKTAAYLKNRTI 505
K WPE + + + T+
Sbjct: 193 K---GKWPEDLLSVLWALRTTV 211
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,980,978
Number of Sequences: 37544
Number of extensions: 275464
Number of successful extensions: 633
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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