Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120444.Seq
         (819 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   3.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.9  
AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    24   6.5  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +3

Query: 336 VCVQRRLAGSQHTRRRIHENADCGQRRFAH-VGYQAAVRGGRRVNRP 473
           +C++  L G  H  R     A C     AH +G+    R  +R +RP
Sbjct: 530 LCIRCGLTG--HKARSCQNEAKCALCGGAHHIGHSECARSAQRCSRP 574


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 194 ARCSAPPQRQNAPPPKARIK 135
           AR S PP  + AP P+A +K
Sbjct: 104 ARPSQPPTTRFAPEPRAEVK 123


>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 706 VTVDTALHRDGVSMILKQKLRSHAP 780
           +T + A+  D +  +LK+ LR H P
Sbjct: 285 LTYEAAMEMDYLECVLKECLRKHPP 309


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 844,726
Number of Sequences: 2352
Number of extensions: 16728
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)