Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120444.Seq
         (819 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.              32   2.9  
Z34281-1|CAA84035.1|   62|Homo sapiens mucin protein.                  31   6.6  
U89335-1|AAC63097.1| 1999|Homo sapiens notch4 protein.                 31   6.6  
AL662830-9|CAI17543.1| 2005|Homo sapiens Notch homolog 4 (Drosop...    31   6.6  
AJ619019-1|CAF02096.1|   99|Homo sapiens transforming growth fac...    31   6.6  
AB023961-1|BAB20317.1|  502|Homo sapiens notch4 protein.               31   6.6  
AY518542-1|AAR99331.1|  772|Homo sapiens ADAM-15 precursor protein.    30   8.8  
AL691442-13|CAI15327.1|  814|Homo sapiens ADAM metallopeptidase ...    30   8.8  
AL451085-36|CAI13274.1|  814|Homo sapiens ADAM metallopeptidase ...    30   8.8  

>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
          Length = 1349

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = -2

Query: 494 SSLSLPQRSINSSPTSHCCLIPHMSKSSLPTVSVFMDSSTRVLGSSEPP 348
           S+ S PQ SI+S+PTS     P  S  S PT S    +S     ++ PP
Sbjct: 822 STTSTPQTSISSAPTSSTTSAPTASTISAPTTST---TSFHTTSTTSPP 867


>Z34281-1|CAA84035.1|   62|Homo sapiens mucin protein.
          Length = 62

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -2

Query: 494 SSLSLPQRSINSSPTSHCCLIPHMSKSSLPTVS 396
           S+ S PQ SI+S+PTS     P  S  S PT S
Sbjct: 30  STTSTPQTSISSAPTSSTTSAPTASTISAPTTS 62


>U89335-1|AAC63097.1| 1999|Homo sapiens notch4 protein.
          Length = 1999

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
 Frame = +3

Query: 558 NNNHFAYHTCNKSWRC--GVST-----SKMYSRLECHDDTDECQVYILDAEGQPH*RDRG 716
           N ++   H C     C  G+ T      + ++  +C +D DEC+     A+G PH R+ G
Sbjct: 275 NPDNCVSHQCQNGGTCQDGLDTYTCLCPETWTGWDCSEDVDECE-----AQGPPHCRNGG 329

Query: 717 HCASS 731
            C +S
Sbjct: 330 TCQNS 334


>AL662830-9|CAI17543.1| 2005|Homo sapiens Notch homolog 4
           (Drosophila) protein.
          Length = 2005

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
 Frame = +3

Query: 558 NNNHFAYHTCNKSWRC--GVST-----SKMYSRLECHDDTDECQVYILDAEGQPH*RDRG 716
           N ++   H C     C  G+ T      + ++  +C +D DEC+     A+G PH R+ G
Sbjct: 278 NPDNCVSHQCQNGGTCQDGLDTYTCLCPETWTGWDCSEDVDECE-----AQGPPHCRNGG 332

Query: 717 HCASS 731
            C +S
Sbjct: 333 TCQNS 337


>AJ619019-1|CAF02096.1|   99|Homo sapiens transforming growth factor
           receptor beta 1 protein.
          Length = 99

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = -2

Query: 509 VSRKHSSLSLPQRSINSSPTSHCCLIPHMSKSSLPTVSVFMDSSTRVLGSSE 354
           + R    +  P     S  T++CC   H +K  LPT   F   S+  LG  E
Sbjct: 18  IPRDRPFVCAPSSKTGSVTTTYCCNQDHCNKIELPTTGPFSVKSSPGLGPVE 69


>AB023961-1|BAB20317.1|  502|Homo sapiens notch4 protein.
          Length = 502

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
 Frame = +3

Query: 558 NNNHFAYHTCNKSWRC--GVST-----SKMYSRLECHDDTDECQVYILDAEGQPH*RDRG 716
           N ++   H C     C  G+ T      + ++  +C +D DEC+     A+G PH R+ G
Sbjct: 275 NPDNCVSHQCQNGGTCQDGLDTYTCLCPETWTGWDCSEDVDECE-----AQGPPHCRNGG 329

Query: 717 HCASS 731
            C +S
Sbjct: 330 TCQNS 334


>AY518542-1|AAR99331.1|  772|Homo sapiens ADAM-15 precursor protein.
          Length = 772

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 498 FSRHEGRGQWVKGKELVKRQNNNHFAYHTCNKSWRCGVSTSK 623
           ++  +G G  ++G  ++ R  + H   HTC  SWR  V T K
Sbjct: 151 YTLEQGPGD-LQGPPIISRIQDLHLPGHTCALSWRESVHTQK 191


>AL691442-13|CAI15327.1|  814|Homo sapiens ADAM metallopeptidase
           domain 15 protein.
          Length = 814

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 498 FSRHEGRGQWVKGKELVKRQNNNHFAYHTCNKSWRCGVSTSK 623
           ++  +G G  ++G  ++ R  + H   HTC  SWR  V T K
Sbjct: 151 YTLEQGPGD-LQGPPIISRIQDLHLPGHTCALSWRESVHTQK 191


>AL451085-36|CAI13274.1|  814|Homo sapiens ADAM metallopeptidase
           domain 15 protein.
          Length = 814

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 498 FSRHEGRGQWVKGKELVKRQNNNHFAYHTCNKSWRCGVSTSK 623
           ++  +G G  ++G  ++ R  + H   HTC  SWR  V T K
Sbjct: 151 YTLEQGPGD-LQGPPIISRIQDLHLPGHTCALSWRESVHTQK 191


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,541,525
Number of Sequences: 237096
Number of extensions: 2474914
Number of successful extensions: 10538
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10527
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)