Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120443.Seq
(721 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC060861-1|AAH60861.1| 580|Homo sapiens chromosome 3 open readi... 31 3.1
AK092147-1|BAC03816.1| 580|Homo sapiens protein ( Homo sapiens ... 31 3.1
DQ181928-1|ABA19229.1| 540|Homo sapiens CARDIF protein. 30 7.3
DQ174270-1|AAZ80417.1| 540|Homo sapiens mitochondrial anti-vira... 30 7.3
DQ167126-1|ABA54890.1| 540|Homo sapiens virus-induced signaling... 30 7.3
BC044952-1|AAH44952.1| 540|Homo sapiens virus-induced signaling... 30 7.3
BC016048-1|AAH16048.1| 317|Homo sapiens LRRC38 protein protein. 30 7.3
AL603749-2|CAH70436.1| 294|Homo sapiens leucine rich repeat con... 30 7.3
AL354712-1|CAI21926.1| 294|Homo sapiens leucine rich repeat con... 30 7.3
AL353194-3|CAI11041.1| 540|Homo sapiens novel protein protein. 30 7.3
AL109804-18|CAI18851.1| 540|Homo sapiens novel protein protein. 30 7.3
AB232371-1|BAE79738.1| 540|Homo sapiens Ips-1 protein. 30 7.3
AB097003-1|BAC77356.1| 540|Homo sapiens putative NFkB activatin... 30 7.3
AB033097-1|BAA86585.1| 542|Homo sapiens KIAA1271 protein protein. 30 7.3
AY191222-1|AAP20104.1| 82|Homo sapiens transformation-related ... 30 9.6
>BC060861-1|AAH60861.1| 580|Homo sapiens chromosome 3 open reading
frame 39 protein.
Length = 580
Score = 31.5 bits (68), Expect = 3.1
Identities = 26/90 (28%), Positives = 38/90 (42%)
Frame = +2
Query: 290 CYSAEAQHCY*MSRLTSCKTPNKAYRAFRSSLLILPNLRW*APQSVFFCSLELLRCRLKT 469
CYS EA+ TS PN R F+ +LL L + + +F +EL L+
Sbjct: 85 CYSNEAEEFIFFHGNTSVMLPNLGSRRFQPALLDLSTVE--DHNTQYFNFVELPAAALR- 141
Query: 470 TMSIGRPFFYPSFSVIKNEHKICQFGRVFH 559
+ +P F P ++I N VFH
Sbjct: 142 --FMPKPVFVPDVALIANRFNPDNLMHVFH 169
>AK092147-1|BAC03816.1| 580|Homo sapiens protein ( Homo sapiens
cDNA FLJ34828 fis, clone NT2NE2009295. ).
Length = 580
Score = 31.5 bits (68), Expect = 3.1
Identities = 26/90 (28%), Positives = 38/90 (42%)
Frame = +2
Query: 290 CYSAEAQHCY*MSRLTSCKTPNKAYRAFRSSLLILPNLRW*APQSVFFCSLELLRCRLKT 469
CYS EA+ TS PN R F+ +LL L + + +F +EL L+
Sbjct: 85 CYSNEAEEFIFFHGNTSVMLPNLGSRRFQPALLDLSTVE--DHNTQYFNFVELPAAALR- 141
Query: 470 TMSIGRPFFYPSFSVIKNEHKICQFGRVFH 559
+ +P F P ++I N VFH
Sbjct: 142 --FMPKPVFVPDVALIANRFNPDNLMHVFH 169
>DQ181928-1|ABA19229.1| 540|Homo sapiens CARDIF protein.
Length = 540
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 234 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 139
TVALK+P P++ VP+ + S K +VP+
Sbjct: 307 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 338
>DQ174270-1|AAZ80417.1| 540|Homo sapiens mitochondrial anti-viral
signaling protein protein.
Length = 540
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 234 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 139
TVALK+P P++ VP+ + S K +VP+
Sbjct: 307 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 338
>DQ167126-1|ABA54890.1| 540|Homo sapiens virus-induced signaling
adapter protein.
Length = 540
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 234 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 139
TVALK+P P++ VP+ + S K +VP+
Sbjct: 307 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 338
>BC044952-1|AAH44952.1| 540|Homo sapiens virus-induced signaling
adapter protein.
Length = 540
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 234 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 139
TVALK+P P++ VP+ + S K +VP+
Sbjct: 307 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 338
>BC016048-1|AAH16048.1| 317|Homo sapiens LRRC38 protein protein.
Length = 317
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 358 SLSRISQLSFNSAKFALVSTAVCLFLLAGIA 450
SL +S+ SF+ +F+L T +C+ + +G+A
Sbjct: 250 SLRELSEASFSECRFSLSLTDLCIIIFSGVA 280
>AL603749-2|CAH70436.1| 294|Homo sapiens leucine rich repeat
containing 38 protein.
Length = 294
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 358 SLSRISQLSFNSAKFALVSTAVCLFLLAGIA 450
SL +S+ SF+ +F+L T +C+ + +G+A
Sbjct: 227 SLRELSEASFSECRFSLSLTDLCIIIFSGVA 257
>AL354712-1|CAI21926.1| 294|Homo sapiens leucine rich repeat
containing 38 protein.
Length = 294
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 358 SLSRISQLSFNSAKFALVSTAVCLFLLAGIA 450
SL +S+ SF+ +F+L T +C+ + +G+A
Sbjct: 227 SLRELSEASFSECRFSLSLTDLCIIIFSGVA 257
>AL353194-3|CAI11041.1| 540|Homo sapiens novel protein protein.
Length = 540
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 234 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 139
TVALK+P P++ VP+ + S K +VP+
Sbjct: 307 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 338
>AL109804-18|CAI18851.1| 540|Homo sapiens novel protein protein.
Length = 540
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 234 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 139
TVALK+P P++ VP+ + S K +VP+
Sbjct: 307 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 338
>AB232371-1|BAE79738.1| 540|Homo sapiens Ips-1 protein.
Length = 540
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 234 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 139
TVALK+P P++ VP+ + S K +VP+
Sbjct: 307 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 338
>AB097003-1|BAC77356.1| 540|Homo sapiens putative NFkB activating
protein protein.
Length = 540
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 234 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 139
TVALK+P P++ VP+ + S K +VP+
Sbjct: 307 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 338
>AB033097-1|BAA86585.1| 542|Homo sapiens KIAA1271 protein protein.
Length = 542
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 234 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 139
TVALK+P P++ VP+ + S K +VP+
Sbjct: 309 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 340
>AY191222-1|AAP20104.1| 82|Homo sapiens transformation-related
gene 6 protein.
Length = 82
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -3
Query: 278 VLTRDFITKIWL--NLRR*RSSCPLHRLLQNTCPLRLAA 168
VL+ FI + W L R S+C H LL TCPL LAA
Sbjct: 30 VLSVSFILRTWRLPYLGRHPSTCEGHLLLILTCPLALAA 68
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,428,042
Number of Sequences: 237096
Number of extensions: 2019786
Number of successful extensions: 8705
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8703
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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