Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120443.Seq
         (721 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-P...    31   1.6  
AE013599-545|AAF59166.2|  922|Drosophila melanogaster CG14766-PA...    31   1.6  
AE014296-3423|AAF51643.2| 1959|Drosophila melanogaster CG11451-P...    31   2.1  
AY069226-1|AAL39371.1|  571|Drosophila melanogaster GH27293p pro...    29   8.4  
AE014134-2139|AAF53150.1|  571|Drosophila melanogaster CG6785-PA...    29   8.4  

>AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-PA
           protein.
          Length = 1161

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -2

Query: 231 VALKLPVAPSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPT 88
           +A K PVA STT  VPT+++ SK    S  +   ++      T  +P+
Sbjct: 340 LAKKYPVATSTTTKVPTTLATSKTTSRSSSSSTTTTTMATSTTATSPS 387


>AE013599-545|AAF59166.2|  922|Drosophila melanogaster CG14766-PA
            protein.
          Length = 922

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -3

Query: 443  PASKKRQTAVLTNANLA--ELKESCEMRDKLYSEFYSLLNETFNNNVAPLLSSIYDEVLT 270
            P S+KR+   +T  N +  E K        LYS +  +++ET  N  +PL    Y   L 
Sbjct: 827  PVSEKRELISITKPNQSDCEAKHRSHKDVNLYSRYPKIISETLENLTSPLRFENYTRELL 886

Query: 269  RDF 261
            + +
Sbjct: 887  KAY 889


>AE014296-3423|AAF51643.2| 1959|Drosophila melanogaster CG11451-PA
           protein.
          Length = 1959

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -2

Query: 210 APSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQD 58
           AP  T Y PT  S  +  ++S+  + R S KN+  T A  +L M    T++
Sbjct: 227 APVATLYPPTQQSLMELEEDSIVREMRESTKNQTKTPAQKSLFMDVGETKN 277


>AY069226-1|AAL39371.1|  571|Drosophila melanogaster GH27293p
           protein.
          Length = 571

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -2

Query: 186 PTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQD 58
           P  I G+KK +N  PA   +       TTAAP    VSD  ++
Sbjct: 333 PPRIEGNKKNQNKRPATTTTKATTTTTTTAAPD---VSDEEEE 372


>AE014134-2139|AAF53150.1|  571|Drosophila melanogaster CG6785-PA
           protein.
          Length = 571

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -2

Query: 186 PTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQD 58
           P  I G+KK +N  PA   +       TTAAP    VSD  ++
Sbjct: 333 PPRIEGNKKNQNKRPATTTTKATTTTTTTAAPD---VSDEEEE 372


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,647,834
Number of Sequences: 53049
Number of extensions: 633431
Number of successful extensions: 1855
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1843
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)