Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120442.Seq
(766 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 128 2e-28
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 114 2e-24
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 103 6e-21
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 99 1e-19
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 95 2e-18
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 91 2e-17
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 91 4e-17
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 90 5e-17
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 86 1e-15
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 84 3e-15
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 83 6e-15
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 83 6e-15
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 82 1e-14
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 81 3e-14
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 81 3e-14
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 80 7e-14
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 79 2e-13
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 78 2e-13
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 77 5e-13
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 77 5e-13
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 77 6e-13
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 76 1e-12
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 75 1e-12
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 75 1e-12
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 75 2e-12
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 75 2e-12
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 75 2e-12
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 75 3e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 74 3e-12
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 74 3e-12
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 73 8e-12
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 73 1e-11
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 71 3e-11
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 71 4e-11
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 70 6e-11
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 70 6e-11
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 68 3e-10
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 66 1e-09
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 65 2e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 65 2e-09
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 64 3e-09
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 64 3e-09
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 64 5e-09
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 63 6e-09
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 62 1e-08
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 62 1e-08
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 62 1e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 62 1e-08
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 60 4e-08
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 60 4e-08
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 60 6e-08
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 60 6e-08
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 60 8e-08
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 60 8e-08
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 59 1e-07
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 59 1e-07
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 58 2e-07
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 58 3e-07
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 56 7e-07
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 56 1e-06
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 56 1e-06
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 56 1e-06
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 56 1e-06
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 55 2e-06
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 55 2e-06
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 54 5e-06
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 53 7e-06
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 53 7e-06
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 53 9e-06
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 52 1e-05
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 52 1e-05
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 52 1e-05
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 52 1e-05
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 52 2e-05
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 52 2e-05
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 51 3e-05
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 51 4e-05
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 50 5e-05
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 50 6e-05
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 50 6e-05
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 49 1e-04
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 49 1e-04
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 2e-04
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 48 3e-04
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 48 3e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 47 4e-04
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 47 4e-04
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 47 6e-04
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 46 8e-04
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 46 0.001
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 46 0.001
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 46 0.001
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 46 0.001
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 45 0.002
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 44 0.003
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 43 0.007
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 42 0.013
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 41 0.029
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 41 0.039
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 41 0.039
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 40 0.089
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 38 0.21
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 38 0.21
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 36 0.83
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.5
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 35 2.5
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 33 7.8
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 128 bits (308), Expect = 2e-28
Identities = 58/86 (67%), Positives = 65/86 (75%)
Frame = +1
Query: 508 FISTFILIFWTS*SLYFNFTRIWDNFPYYFTRKRKKRNLWLFRNNLCYTSNWVIRIHCLS 687
F+STFILIFWT SLYFNFT IW NF YYF K KK NLW+F +NLCY SNW+I I+CLS
Sbjct: 23 FMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSDNLCYISNWIISIYCLS 82
Query: 688 SSYIHCRYRYDTRAYFTSATIIIAGP 765
SSYI+ Y YFTSAT+IIA P
Sbjct: 83 SSYIYSSNSYWYSTYFTSATMIIAVP 108
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 114 bits (275), Expect = 2e-24
Identities = 74/148 (50%), Positives = 78/148 (52%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
LAIFSLHLAGISS SFDQ+PLFV AVGITAF AG
Sbjct: 142 LAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAG 201
Query: 435 AITILLTDRNLNTSFFDPAGGGDPIYINIXXXXXXXXXXXXXXXQDLG*FPILFHXXXXX 614
AIT+LLTDRNLNTSFFDPAGGGDPI QDL F +LF
Sbjct: 202 AITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMFSFSQDLVSFHMLFPKKVEK 261
Query: 615 XXPLVV*E*FMLY*QLGY*DSLFELIIY 698
LVV FM L Y D LFELI+Y
Sbjct: 262 SKLLVVSVSFMQSWLLVYSDLLFELIMY 289
Score = 88.2 bits (209), Expect = 2e-16
Identities = 44/69 (63%), Positives = 48/69 (69%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N LVPL+LGAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH
Sbjct: 77 NWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHG 136
Query: 241 GRSVDLLFF 267
G SVDL F
Sbjct: 137 GSSVDLAIF 145
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 103 bits (246), Expect = 6e-21
Identities = 47/69 (68%), Positives = 55/69 (79%)
Frame = -3
Query: 254 STDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILFIRGNAISGAPSIR 75
STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LFIRGNA+SGAP++
Sbjct: 91 STDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLFIRGNAMSGAPNMS 150
Query: 74 GTNQFPNPP 48
GTNQFPNPP
Sbjct: 151 GTNQFPNPP 159
Score = 84.6 bits (200), Expect = 2e-15
Identities = 46/83 (55%), Positives = 54/83 (65%)
Frame = -1
Query: 508 IGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNRXX 329
IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I +R
Sbjct: 6 IGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRML 65
Query: 328 XXXXXXXXXXXIDEIPAKCSEKI 260
I+E PAKC+EKI
Sbjct: 66 ITVVMKFTAPKIEETPAKCNEKI 88
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 98.7 bits (235), Expect = 1e-19
Identities = 52/85 (61%), Positives = 55/85 (64%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
LAIFSLHLAGISS SFDQ+PLF+ AVGITA AG
Sbjct: 118 LAIFSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAG 177
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
AIT+LLTDRNLNTSFFDPAGGGDPI
Sbjct: 178 AITMLLTDRNLNTSFFDPAGGGDPI 202
Score = 87.8 bits (208), Expect = 3e-16
Identities = 43/69 (62%), Positives = 48/69 (69%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N L+PL+LGAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH
Sbjct: 53 NWLIPLMLGAPDMAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHG 112
Query: 241 GRSVDLLFF 267
G SVDL F
Sbjct: 113 GSSVDLAIF 121
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILI 562
P LYQHLF FFGHPEVYILI
Sbjct: 201 PILYQHLFWFFGHPEVYILI 220
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 95.1 bits (226), Expect = 2e-18
Identities = 45/72 (62%), Positives = 50/72 (69%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P LYQHLF FFGHPEVYILILPGFGIISH+I E GKKETF FIV
Sbjct: 212 PILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKKETFGMLGMIYAMLTIGFLGFIV 271
Query: 683 *AHHIFTVGIDM 718
AHH+FT+G+D+
Sbjct: 272 WAHHMFTIGMDV 283
Score = 77.8 bits (183), Expect = 3e-13
Identities = 42/85 (49%), Positives = 49/85 (57%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
L IFSLHLAG SS + D++ LF +V ITA AG
Sbjct: 129 LGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAG 188
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
AIT+LLTDRN+NTSFFDP+GGGDPI
Sbjct: 189 AITMLLTDRNMNTSFFDPSGGGDPI 213
Score = 66.5 bits (155), Expect = 7e-10
Identities = 32/69 (46%), Positives = 41/69 (59%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N L+PL+LG+PD++FPR+NN+ F + G GTG TVYPPLS + H
Sbjct: 64 NWLIPLMLGSPDMSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHG 123
Query: 241 GRSVDLLFF 267
G SVDL F
Sbjct: 124 GMSVDLGIF 132
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 91.5 bits (217), Expect = 2e-17
Identities = 43/72 (59%), Positives = 49/72 (68%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P LYQHLF FFGHPEVYILILPGFGIISH+++ GKKE F FIV
Sbjct: 228 PILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIV 287
Query: 683 *AHHIFTVGIDM 718
AHH+FTVG+D+
Sbjct: 288 WAHHMFTVGMDV 299
Score = 78.6 bits (185), Expect = 2e-13
Identities = 44/85 (51%), Positives = 48/85 (56%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
L IFSLHLAG+SS S Q PLFV AV +TA A
Sbjct: 145 LTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSLPVLAA 204
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
IT+LLTDRNLNT+FFDPAGGGDPI
Sbjct: 205 GITMLLTDRNLNTTFFDPAGGGDPI 229
Score = 77.8 bits (183), Expect = 3e-13
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHA 139
Query: 241 GRSVDLLFF 267
G SVDL F
Sbjct: 140 GASVDLTIF 148
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 90.6 bits (215), Expect = 4e-17
Identities = 43/72 (59%), Positives = 49/72 (68%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P LYQHLF FFGHPEVYILILPGFG+ISHI++ GKKE F FIV
Sbjct: 228 PILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIV 287
Query: 683 *AHHIFTVGIDM 718
AHH+FTVG+D+
Sbjct: 288 WAHHMFTVGMDV 299
Score = 77.0 bits (181), Expect = 5e-13
Identities = 37/69 (53%), Positives = 45/69 (65%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N LVPL++GAPD+AFPR+NN+ F +VE GAGTG TVYPPL+ N +H
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHP 139
Query: 241 GRSVDLLFF 267
G SVDL F
Sbjct: 140 GASVDLTIF 148
Score = 76.6 bits (180), Expect = 6e-13
Identities = 43/85 (50%), Positives = 48/85 (56%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
L IFSLHLAG+SS + Q PLFV +V ITA A
Sbjct: 145 LTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAA 204
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
IT+LLTDRNLNT+FFDPAGGGDPI
Sbjct: 205 GITMLLTDRNLNTTFFDPAGGGDPI 229
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 90.2 bits (214), Expect = 5e-17
Identities = 42/72 (58%), Positives = 49/72 (68%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P LYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F FIV
Sbjct: 228 PILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIV 287
Query: 683 *AHHIFTVGIDM 718
AHH+FTVG+D+
Sbjct: 288 WAHHMFTVGMDV 299
Score = 77.8 bits (183), Expect = 3e-13
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHA 139
Query: 241 GRSVDLLFF 267
G SVDL F
Sbjct: 140 GASVDLTIF 148
Score = 76.2 bits (179), Expect = 8e-13
Identities = 42/85 (49%), Positives = 48/85 (56%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
L IFSLHLAG+SS + Q PLFV +V +TA A
Sbjct: 145 LTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSLPVLAA 204
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
IT+LLTDRNLNT+FFDPAGGGDPI
Sbjct: 205 GITMLLTDRNLNTTFFDPAGGGDPI 229
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 85.8 bits (203), Expect = 1e-15
Identities = 39/70 (55%), Positives = 48/70 (68%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
L+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E F F+V A
Sbjct: 207 LFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGMVYAMIAIGVLGFLVWA 266
Query: 689 HHIFTVGIDM 718
HH+FTVG+D+
Sbjct: 267 HHMFTVGMDV 276
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 84.2 bits (199), Expect = 3e-15
Identities = 44/85 (51%), Positives = 52/85 (61%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
LAIFSLHL+G+SS + +LPLFV +V +TAF AG
Sbjct: 148 LAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAG 207
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
AIT+LLTDRN NT+FFDPAGGGDPI
Sbjct: 208 AITMLLTDRNFNTTFFDPAGGGDPI 232
Score = 83.8 bits (198), Expect = 4e-15
Identities = 42/72 (58%), Positives = 47/72 (65%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P LYQHLF FFGHPEVYILILPGFGIISHI+S G K F F+V
Sbjct: 231 PILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSG-KPVFGYLGMVYAMISIGVLGFLV 289
Query: 683 *AHHIFTVGIDM 718
AHH+FTVG+D+
Sbjct: 290 WAHHMFTVGLDV 301
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/69 (49%), Positives = 43/69 (62%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N VP+++GAPD+AFPR+NNI F +VE G+GTG TVYPPLS +H
Sbjct: 83 NWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHS 142
Query: 241 GRSVDLLFF 267
G +VDL F
Sbjct: 143 GGAVDLAIF 151
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 83.4 bits (197), Expect = 6e-15
Identities = 44/85 (51%), Positives = 51/85 (60%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
LAIFSLHL+GISS + +LPLFV A+ +TA AG
Sbjct: 145 LAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAG 204
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
AIT+LLTDRN NTSF+DPAGGGDPI
Sbjct: 205 AITMLLTDRNFNTSFYDPAGGGDPI 229
Score = 77.0 bits (181), Expect = 5e-13
Identities = 36/72 (50%), Positives = 46/72 (63%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P LYQHLF FFGHPEVYILI+PGFG++SHI+S G K F F+V
Sbjct: 228 PILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSG-KPVFGYLGMVYAMFSIGILGFLV 286
Query: 683 *AHHIFTVGIDM 718
+HH++ VG+D+
Sbjct: 287 WSHHMYAVGLDV 298
Score = 74.5 bits (175), Expect = 3e-12
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139
Query: 241 GRSVDLLFF 267
G SVDL F
Sbjct: 140 GGSVDLAIF 148
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 83.4 bits (197), Expect = 6e-15
Identities = 44/85 (51%), Positives = 51/85 (60%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
LAIFSLHL+GISS + +LPLFV A+ +TA AG
Sbjct: 145 LAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAG 204
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
AIT+LLTDRN NTSF+DPAGGGDPI
Sbjct: 205 AITMLLTDRNFNTSFYDPAGGGDPI 229
Score = 74.5 bits (175), Expect = 3e-12
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139
Query: 241 GRSVDLLFF 267
G SVDL F
Sbjct: 140 GGSVDLAIF 148
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 82.2 bits (194), Expect = 1e-14
Identities = 44/85 (51%), Positives = 51/85 (60%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
AIT+LLTDRN+NTSFFDPAGGGDPI
Sbjct: 124 AITMLLTDRNINTSFFDPAGGGDPI 148
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/64 (56%), Positives = 38/64 (59%)
Frame = +1
Query: 76 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 255
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 256 LLFF 267
L F
Sbjct: 64 LAIF 67
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 81.0 bits (191), Expect = 3e-14
Identities = 40/69 (57%), Positives = 45/69 (65%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N LVPL+LGAPD+AFPR+NN+ F VE+GAGTG TVYPPLS N AH
Sbjct: 63 NWLVPLMLGAPDMAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHA 122
Query: 241 GRSVDLLFF 267
G SVDL F
Sbjct: 123 GPSVDLAIF 131
Score = 80.6 bits (190), Expect = 4e-14
Identities = 44/85 (51%), Positives = 49/85 (57%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
LAIFSLHLAG+SS + + LFV +V ITA AG
Sbjct: 128 LAIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAG 187
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
AIT+LLTDRN NTSFFDPAGGGDPI
Sbjct: 188 AITMLLTDRNFNTSFFDPAGGGDPI 212
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 81.0 bits (191), Expect = 3e-14
Identities = 40/72 (55%), Positives = 47/72 (65%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P LYQHLF FFGHPEVYILILPGFG+ISHI+S +K F FIV
Sbjct: 236 PILYQHLFWFFGHPEVYILILPGFGMISHIVS-TFSRKPVFGYIGMVYAMVSIGVLGFIV 294
Query: 683 *AHHIFTVGIDM 718
AHH++TVG+D+
Sbjct: 295 WAHHMYTVGLDV 306
Score = 77.8 bits (183), Expect = 3e-13
Identities = 41/85 (48%), Positives = 50/85 (58%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
LAIFSLH++G SS S ++PLFV ++ +TAF AG
Sbjct: 153 LAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAG 212
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
AIT+LLTDRN NTSFFD +GGGDPI
Sbjct: 213 AITMLLTDRNFNTSFFDASGGGDPI 237
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/69 (50%), Positives = 44/69 (63%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N LVP+++G+PD+AFPR+NNI F +VE G GTG TVYPPLSS +H
Sbjct: 88 NWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHS 147
Query: 241 GRSVDLLFF 267
G +VDL F
Sbjct: 148 GGAVDLAIF 156
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 79.8 bits (188), Expect = 7e-14
Identities = 46/85 (54%), Positives = 49/85 (57%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
LAIFSLHLAGISS S Q PLFV +V ITA A
Sbjct: 146 LAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAA 205
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
IT+LLTDRNLNT+FFDPAGGGDPI
Sbjct: 206 GITMLLTDRNLNTTFFDPAGGGDPI 230
Score = 79.0 bits (186), Expect = 1e-13
Identities = 39/69 (56%), Positives = 46/69 (66%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH
Sbjct: 81 NWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHA 140
Query: 241 GRSVDLLFF 267
G SVDL F
Sbjct: 141 GASVDLAIF 149
Score = 72.5 bits (170), Expect = 1e-11
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 625
P LYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F
Sbjct: 229 PILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPF 269
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 78.6 bits (185), Expect = 2e-13
Identities = 42/85 (49%), Positives = 50/85 (58%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
+AIFSLHLAG+SS + ++PLFV +V ITA AG
Sbjct: 146 MAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVLAG 205
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
AIT+LLTDR NT+FFDPAGGGDPI
Sbjct: 206 AITMLLTDRYFNTTFFDPAGGGDPI 230
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/69 (53%), Positives = 44/69 (63%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N VPL++GAPD+AFPR+NNI F +VE GAGTG TVYPPL+S AH
Sbjct: 81 NWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHS 140
Query: 241 GRSVDLLFF 267
G SVD+ F
Sbjct: 141 GGSVDMAIF 149
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/69 (56%), Positives = 44/69 (63%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
LYQHLF FFGHPEVYILILPGFG++SHII+ KK F FIV A
Sbjct: 234 LYQHLFWFFGHPEVYILILPGFGLVSHIIA-TFSKKRVFGHVPMIAAMLMIGLIGFIVWA 292
Query: 689 HHIFTVGID 715
HH++T GID
Sbjct: 293 HHMYTSGID 301
Score = 70.1 bits (164), Expect = 6e-11
Identities = 33/71 (46%), Positives = 42/71 (59%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N VP+++GAPD++FPR+NN F E G GTG TVYPPLSS +H
Sbjct: 84 NYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHS 143
Query: 241 GRSVDLLFFHY 273
G SVDL+ F +
Sbjct: 144 GASVDLMIFSF 154
Score = 66.1 bits (154), Expect = 9e-10
Identities = 36/85 (42%), Positives = 42/85 (49%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
L IFS HL GI S LPLFV +V +T+F A
Sbjct: 149 LMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAIPVLAA 208
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
AIT+LL DRN NTSF+DP GGGD +
Sbjct: 209 AITLLLFDRNFNTSFYDPVGGGDVV 233
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 77.0 bits (181), Expect = 5e-13
Identities = 36/69 (52%), Positives = 45/69 (65%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPPL+ N+AH
Sbjct: 69 NWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHA 128
Query: 241 GRSVDLLFF 267
G SVDL F
Sbjct: 129 GASVDLTIF 137
Score = 63.7 bits (148), Expect = 5e-09
Identities = 39/78 (50%), Positives = 41/78 (52%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
L IFSLHLAGISS S Q PLFV AV ITA A
Sbjct: 134 LTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSLPVLAA 193
Query: 435 AITILLTDRNLNTSFFDP 488
IT+LLTDRNLNT+FFDP
Sbjct: 194 GITMLLTDRNLNTTFFDP 211
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 77.0 bits (181), Expect = 5e-13
Identities = 36/63 (57%), Positives = 42/63 (66%)
Frame = +2
Query: 530 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 709
FFGHPEVYILILPGFG+ISHI++ GKKE F FIV AHH+FTVG
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVG 61
Query: 710 IDM 718
+D+
Sbjct: 62 MDV 64
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 76.6 bits (180), Expect = 6e-13
Identities = 36/71 (50%), Positives = 45/71 (63%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P LY+HLF FFGHPEVYILI+PGFGIISH++S KK F F+V
Sbjct: 229 PILYEHLFWFFGHPEVYILIIPGFGIISHVVS-TYSKKPVFGEISMVYAMASIGLLGFLV 287
Query: 683 *AHHIFTVGID 715
+HH++ VG+D
Sbjct: 288 WSHHMYIVGLD 298
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/69 (56%), Positives = 44/69 (63%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N L+PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH
Sbjct: 81 NYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140
Query: 241 GRSVDLLFF 267
G SVDL F
Sbjct: 141 GPSVDLAIF 149
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/85 (43%), Positives = 46/85 (54%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
LAIF+LHL ISS + +LPLFV ++ ITAF +
Sbjct: 146 LAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSA 205
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
IT+LL DRN NTSFF+ +GGGDPI
Sbjct: 206 GITMLLLDRNFNTSFFEVSGGGDPI 230
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/72 (51%), Positives = 44/72 (61%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P LYQHLF FFGHPEVYI+ILPGFGIIS I+S +K F F+V
Sbjct: 271 PELYQHLFWFFGHPEVYIMILPGFGIISQIVS-TFSRKPVFGYLGMAYAMVAIGVVGFVV 329
Query: 683 *AHHIFTVGIDM 718
AHH+FT G+ +
Sbjct: 330 WAHHMFTTGMSV 341
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/84 (42%), Positives = 46/84 (54%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
+AI SLH+AG SS + ++PLFV +V +TAF A
Sbjct: 188 MAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAA 247
Query: 435 AITILLTDRNLNTSFFDPAGGGDP 506
AIT+LLTDRN T+F+D AGGGDP
Sbjct: 248 AITMLLTDRNFGTTFYDAAGGGDP 271
Score = 53.6 bits (123), Expect = 5e-06
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSN 228
N VP+++GAPD+AFPR+NNI F V NGAGTG TVY PLS++
Sbjct: 120 NWFVPIMIGAPDMAFPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS 179
Query: 229 IAHRGRSVDL 258
G +VD+
Sbjct: 180 -GSAGPAVDM 188
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/70 (52%), Positives = 44/70 (62%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
LYQHLF FFGHPEVYILI+PGFGIIS +IS K F FIV +
Sbjct: 257 LYQHLFWFFGHPEVYILIIPGFGIISTVIS-ANSNKNVFGYLGMVYAMMSIGLLGFIVWS 315
Query: 689 HHIFTVGIDM 718
HH++TVG+D+
Sbjct: 316 HHMYTVGLDV 325
Score = 66.9 bits (156), Expect = 5e-10
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N L+P+++G PD+AFPR+NN+ + I+ENG GTG T+YPPLS +H
Sbjct: 107 NFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHS 166
Query: 241 GRSVDLLFF 267
VDL F
Sbjct: 167 SMGVDLGIF 175
Score = 64.5 bits (150), Expect = 3e-09
Identities = 39/85 (45%), Positives = 44/85 (51%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
L IF LHL+GISS +L LF AV ITA A
Sbjct: 172 LGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAA 231
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
AIT+LLTDRNLNTSF++ AGGGD I
Sbjct: 232 AITMLLTDRNLNTSFYELAGGGDAI 256
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/69 (56%), Positives = 44/69 (63%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N L+PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH
Sbjct: 81 NYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140
Query: 241 GRSVDLLFF 267
G SVDL F
Sbjct: 141 GPSVDLAIF 149
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/85 (43%), Positives = 46/85 (54%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
LAIF+LHL ISS + +LPLFV ++ ITAF +
Sbjct: 146 LAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSA 205
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
IT+LL DRN NTSFF+ +GGGDPI
Sbjct: 206 GITMLLLDRNFNTSFFEVSGGGDPI 230
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/72 (47%), Positives = 42/72 (58%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P L+QHLF FFGHPEVYILILP FG+ISHI+ + K F F+V
Sbjct: 231 PILWQHLFWFFGHPEVYILILPAFGVISHILCRSSAKLHVFGKIGMSWASMGIAWMGFLV 290
Query: 683 *AHHIFTVGIDM 718
HH+F G+D+
Sbjct: 291 WGHHMFVAGLDI 302
Score = 51.2 bits (117), Expect = 3e-05
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITAFXXXXXXXXXA 431
LA+FSLH+AG+SS F L P+ + + T+ A
Sbjct: 147 LAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVTSVPVLA 206
Query: 432 GAITILLTDRNLNTSFFDPAGGGDPI 509
+T+LL DR+ +TSF+ P GGGDPI
Sbjct: 207 AGLTLLLLDRHFSTSFYYPEGGGDPI 232
Score = 42.7 bits (96), Expect = 0.010
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N +PL++ D++ PR+NN+ + G G G T+YPPLS++
Sbjct: 82 NWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMD 141
Query: 241 GRSVDLLFF 267
G +DL F
Sbjct: 142 GLPIDLAVF 150
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/64 (56%), Positives = 42/64 (65%)
Frame = +1
Query: 76 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 255
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 256 LLFF 267
L +
Sbjct: 61 LAIY 64
Score = 40.7 bits (91), Expect = 0.039
Identities = 20/44 (45%), Positives = 22/44 (50%)
Frame = +2
Query: 374 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRP 505
CM C +Y TCFS S+Y IIN K KY IF W P
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSP 140
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/72 (51%), Positives = 44/72 (61%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P LYQHLF FFGHPEVYILI+PGFGIIS IS K F F+V
Sbjct: 229 PILYQHLFWFFGHPEVYILIIPGFGIISTTIS-ANSNKSVFGYLGMVYAMCSIGILGFVV 287
Query: 683 *AHHIFTVGIDM 718
+HH++TVG+D+
Sbjct: 288 WSHHMYTVGLDV 299
Score = 68.9 bits (161), Expect = 1e-10
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
LAIF LHL+GISS +L LF AV ITA AG
Sbjct: 146 LAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSLPVLAG 205
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
IT++LTDRN NTSFF+ AGGGDPI
Sbjct: 206 GITMVLTDRNFNTSFFEVAGGGDPI 230
Score = 66.5 bits (155), Expect = 7e-10
Identities = 33/69 (47%), Positives = 40/69 (57%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N L+PL LG PD+ FPR+NNI + +ENG GTG T+YPPLS +H
Sbjct: 81 NFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHS 140
Query: 241 GRSVDLLFF 267
G SVDL F
Sbjct: 141 GPSVDLAIF 149
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 74.5 bits (175), Expect = 3e-12
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139
Query: 241 GRSVDLLFF 267
G SVDL F
Sbjct: 140 GGSVDLAIF 148
Score = 35.1 bits (77), Expect = 1.9
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
LAIFSLHL+GISS + +LPLFV A+ +TA AG
Sbjct: 145 LAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 74.1 bits (174), Expect = 3e-12
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = +1
Query: 517 TFILIFWTS*SLYFNFTRIWDNFPYYFTRKRKKRNLWLFRNNLCYTSNWVIRIHCLS 687
+ ++IFW+S SLYFN IW NFPYY+T K K LW F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/71 (49%), Positives = 43/71 (60%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P YQH F FFGHPEVYILI+PGFGI+SHI+S KK F F+V
Sbjct: 229 PIFYQHAFWFFGHPEVYILIIPGFGIVSHIVS-TYSKKPVFGEISMVYAMASIGLLGFLV 287
Query: 683 *AHHIFTVGID 715
+HH++ VG+D
Sbjct: 288 WSHHMYIVGLD 298
Score = 73.3 bits (172), Expect = 6e-12
Identities = 40/86 (46%), Positives = 47/86 (54%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
LAIFSLHL ISS S ++PLFV A+ ITAF +
Sbjct: 146 LAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVLSA 205
Query: 435 AITILLTDRNLNTSFFDPAGGGDPIY 512
IT+LL DRN NTSFF+ AGGGDPI+
Sbjct: 206 GITMLLMDRNFNTSFFEVAGGGDPIF 231
Score = 71.7 bits (168), Expect = 2e-11
Identities = 36/69 (52%), Positives = 45/69 (65%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N ++PL++GA D++FPRIN+I F +VE+GAGTG TVYPPLSS AH
Sbjct: 81 NYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140
Query: 241 GRSVDLLFF 267
G SVDL F
Sbjct: 141 GPSVDLAIF 149
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 72.9 bits (171), Expect = 8e-12
Identities = 37/69 (53%), Positives = 44/69 (63%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N ++PL++GA D AFPRINNI F +VE+GAGTG TVYPPL+S AH
Sbjct: 81 NYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHS 140
Query: 241 GRSVDLLFF 267
G SVDL F
Sbjct: 141 GPSVDLAIF 149
Score = 66.1 bits (154), Expect = 9e-10
Identities = 36/85 (42%), Positives = 45/85 (52%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
LAIF+LH+ ISS + +LPLFV A+ ITA +
Sbjct: 146 LAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLPVLSA 205
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
+T+LL DRN NTSFF+ AGGGDPI
Sbjct: 206 GVTMLLLDRNFNTSFFEVAGGGDPI 230
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 72.5 bits (170), Expect = 1e-11
Identities = 34/75 (45%), Positives = 46/75 (61%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P L+QH+F FFGHPEVYI+ILP FG+ISHI++ KK F F+V
Sbjct: 334 PILFQHIFWFFGHPEVYIVILPAFGVISHIVA-TFSKKPIFGYLPMVYALVAIGGLGFVV 392
Query: 683 *AHHIFTVGIDMIHE 727
AHH++TVG+ + +
Sbjct: 393 WAHHMYTVGMTLTQQ 407
Score = 70.5 bits (165), Expect = 4e-11
Identities = 36/84 (42%), Positives = 48/84 (57%)
Frame = +3
Query: 258 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 437
AIF++H++G SS + ++PLF +V +TA+ AGA
Sbjct: 252 AIFAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGA 311
Query: 438 ITILLTDRNLNTSFFDPAGGGDPI 509
IT+LLTDRN T+FFDPAGGGDPI
Sbjct: 312 ITMLLTDRNFGTTFFDPAGGGDPI 335
Score = 59.7 bits (138), Expect = 8e-08
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N +PL++GAPD+AFPR+NN+ + +++ GAG G T YPP+S+
Sbjct: 186 NYFMPLMIGAPDMAFPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVET 245
Query: 241 GRSVDLLFF 267
R+VD F
Sbjct: 246 SRAVDFAIF 254
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/73 (45%), Positives = 40/73 (54%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P L+QHLF FFGHPEVY+LILPGFGI+SHI +F +V
Sbjct: 318 PILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLSNNDSSFGYYGLICAMASIVCLGSVV 377
Query: 683 *AHHIFTVGIDMI 721
HH+F VG D +
Sbjct: 378 WGHHMFMVGFDSL 390
Score = 48.8 bits (111), Expect = 1e-04
Identities = 31/83 (37%), Positives = 39/83 (46%)
Frame = +3
Query: 261 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 440
+FSLHLAG+SS S + V A T+ A I
Sbjct: 242 MFSLHLAGVSSLIGSVNFISTIFSRLSFNCS-----IIVWAYLFTSVLLLLSLPVLASGI 296
Query: 441 TILLTDRNLNTSFFDPAGGGDPI 509
T+LL DRN T+FF+P+GGGDPI
Sbjct: 297 TMLLFDRNFGTAFFEPSGGGDPI 319
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 70.5 bits (165), Expect = 4e-11
Identities = 34/58 (58%), Positives = 39/58 (67%)
Frame = +2
Query: 545 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDM 718
EVYILILPGFG+ISHIISQE GKKE F F+V AHH+FTVG+D+
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDV 212
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 70.1 bits (164), Expect = 6e-11
Identities = 34/71 (47%), Positives = 43/71 (60%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F F V
Sbjct: 246 PLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCV 304
Query: 683 *AHHIFTVGID 715
+HH+FTVG+D
Sbjct: 305 WSHHMFTVGLD 315
Score = 65.3 bits (152), Expect = 2e-09
Identities = 35/85 (41%), Positives = 46/85 (54%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
+AIF+LHL+G+SS + +LPLFV +V ITA A
Sbjct: 163 MAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAA 222
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
+T+LL DRN NTSFF +GGGDP+
Sbjct: 223 GLTMLLMDRNFNTSFFVVSGGGDPL 247
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 241 GRSVDLLFF 267
G S+D+ F
Sbjct: 158 GSSIDMAIF 166
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 70.1 bits (164), Expect = 6e-11
Identities = 34/71 (47%), Positives = 43/71 (60%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F F V
Sbjct: 246 PLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCV 304
Query: 683 *AHHIFTVGID 715
+HH+FTVG+D
Sbjct: 305 WSHHMFTVGLD 315
Score = 65.3 bits (152), Expect = 2e-09
Identities = 35/85 (41%), Positives = 46/85 (54%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
+AIF+LHL+G+SS + +LPLFV +V ITA A
Sbjct: 163 MAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAA 222
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
+T+LL DRN NTSFF +GGGDP+
Sbjct: 223 GLTMLLMDRNFNTSFFVVSGGGDPL 247
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 241 GRSVDLLFF 267
G S+D+ F
Sbjct: 158 GSSIDMAIF 166
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 67.7 bits (158), Expect = 3e-10
Identities = 33/72 (45%), Positives = 42/72 (58%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P LYQHLF FFGHPEVYILILP FG+ISH+IS + F +V
Sbjct: 234 PILYQHLFWFFGHPEVYILILPAFGVISHVISTNY-CRNLFGNQSMILAMGCIAVLGSLV 292
Query: 683 *AHHIFTVGIDM 718
HH++T G+++
Sbjct: 293 WVHHMYTTGLEV 304
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N +P++ G+P++A+PRIN+I E G GTG T+YPPLS+++
Sbjct: 85 NYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSL 144
Query: 241 GR-SVDLLFF 267
+VD++ F
Sbjct: 145 SPVAVDVIIF 154
Score = 35.1 bits (77), Expect = 1.9
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 432 GAITILLTDRNLNTSFFDPAGGGDPI 509
G + +LL+D + NT FFDP GDPI
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPI 235
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P LYQHLF FFGHPEVY++ILP FG+ S I++ K+ F + V
Sbjct: 238 PVLYQHLFWFFGHPEVYVIILPVFGLTSLILTSII-HKDIFGREGMMYCIISIGVVGYFV 296
Query: 683 *AHHIFTVGIDM 718
AHH+FTVG+D+
Sbjct: 297 WAHHMFTVGLDI 308
Score = 36.7 bits (81), Expect = 0.63
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI-VENGAGTG*TVYPPLSSNIAH 237
N L+P+++G +++ PR+N I F + + +G T+YPPLS+ A
Sbjct: 90 NYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDAD 149
Query: 238 R-GRSVDL 258
G ++DL
Sbjct: 150 NIGVNIDL 157
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 65.3 bits (152), Expect = 2e-09
Identities = 35/85 (41%), Positives = 46/85 (54%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
+AIF+LHL+G+SS + +LPLFV +V ITA A
Sbjct: 163 MAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAA 222
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
+T+LL DRN NTSFF +GGGDP+
Sbjct: 223 GLTMLLMDRNFNTSFFVVSGGGDPL 247
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 241 GRSVDLLFF 267
G S+D+ F
Sbjct: 158 GSSIDMAIF 166
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 65.3 bits (152), Expect = 2e-09
Identities = 35/85 (41%), Positives = 46/85 (54%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
+AIF+LHL+G+SS + +LPLFV +V ITA A
Sbjct: 163 MAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAA 222
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
+T+LL DRN NTSFF +GGGDP+
Sbjct: 223 GLTMLLMDRNFNTSFFVVSGGGDPL 247
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 241 GRSVDLLFF 267
G S+D+ F
Sbjct: 158 GSSIDMAIF 166
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 64.5 bits (150), Expect = 3e-09
Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSN 228
N L+PL++G PD+AFPR+NNI F I+E G GTG T+ YPPLS
Sbjct: 109 NFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGL 168
Query: 229 IAHRGRSVDLLFF 267
+H G SVDL F
Sbjct: 169 QSHSGPSVDLAIF 181
Score = 60.1 bits (139), Expect = 6e-08
Identities = 27/37 (72%), Positives = 29/37 (78%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 613
P L+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 254 PILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 50.0 bits (114), Expect = 6e-05
Identities = 33/85 (38%), Positives = 41/85 (48%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
LAIF+LHL+G+SS +L LF A +
Sbjct: 178 LAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALFGWATWSSRSRYFL------- 230
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
IT++LTDRN NTSFF+ AGGGDPI
Sbjct: 231 GITMVLTDRNFNTSFFEVAGGGDPI 255
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 64.5 bits (150), Expect = 3e-09
Identities = 33/71 (46%), Positives = 41/71 (57%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P +QHLF FFGHPEVY+L+LP GI+S I+ + G+K F F V
Sbjct: 282 PIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGRK-LFGFKFVVYSTLAIGVLSFGV 340
Query: 683 *AHHIFTVGID 715
AHH+FT GID
Sbjct: 341 WAHHMFTTGID 351
Score = 34.7 bits (76), Expect = 2.5
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNIA 234
N +PL++ A D+AFPRIN I F ++ A T T+Y PLS ++
Sbjct: 135 NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS 194
Query: 235 HRGRSVDLLFFH 270
+ +L H
Sbjct: 195 SPAVDMMMLGLH 206
Score = 33.1 bits (72), Expect = 7.8
Identities = 22/86 (25%), Positives = 34/86 (39%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
+ + LHL G+S+ + L +F + +
Sbjct: 200 MMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIFSWTMLTQSGLILFAFPLFGS 259
Query: 435 AITILLTDRNLNTSFFDPAGGGDPIY 512
A+ +LL DRN T+FF A GGDPI+
Sbjct: 260 ALIMLLLDRNFGTTFFTVA-GGDPIF 284
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 63.7 bits (148), Expect = 5e-09
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P L+QHLF FFGHPEVYI+ LP FGI+S +IS +K F F+V
Sbjct: 268 PLLFQHLFWFFGHPEVYIVALPAFGIVSDLIS-THARKNIFGYRMMVWAIVAIGALSFVV 326
Query: 683 *AHHIFTVGI 712
AHH++ G+
Sbjct: 327 WAHHMYVSGM 336
Score = 35.5 bits (78), Expect = 1.5
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP 216
N L+PL++GA D+ FP +N + + V G G G T+YPP
Sbjct: 107 NYLIPLMVGARDMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPP 159
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 63.3 bits (147), Expect = 6e-09
Identities = 49/138 (35%), Positives = 58/138 (42%)
Frame = +3
Query: 48 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI* 227
W IWKL P NK YKILT PL Y N+ NS P
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPI----------NKRNSSPLASSI 77
Query: 228 YRT*RKIRRLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 407
+ +AIFSLHLAG+SS + D++PLF+ AV IT
Sbjct: 78 AHAGASVD-MAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFITTVLL 136
Query: 408 XXXXXXXAGAITILLTDR 461
AGAIT+LLTDR
Sbjct: 137 LLSLPVLAGAITMLLTDR 154
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/72 (43%), Positives = 38/72 (52%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P LYQHLF FFGHPEVY++ILP FGIIS + K F V
Sbjct: 238 PLLYQHLFWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLFGQTSMTFASIWIAVLGTSV 297
Query: 683 *AHHIFTVGIDM 718
HH++T G+D+
Sbjct: 298 WGHHMYTAGLDI 309
Score = 50.4 bits (115), Expect = 5e-05
Identities = 27/83 (32%), Positives = 37/83 (44%)
Frame = +3
Query: 261 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 440
I LH GI S + DQ+ +FV +T+F AG++
Sbjct: 157 ILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSL 216
Query: 441 TILLTDRNLNTSFFDPAGGGDPI 509
LL DRN NTSF+D GG+P+
Sbjct: 217 LFLLLDRNFNTSFYDTKKGGNPL 239
Score = 46.4 bits (105), Expect = 8e-04
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 222
N ++PL+LGAP++AFPR+N + F + G G+ T YPPLS
Sbjct: 91 NWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLS 144
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
L+QHLF FFGHPEVYI++LP GIIS+I+ + G++ F F V A
Sbjct: 315 LWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGRR-LFGFKFVVYSTLAIGVLSFGVWA 373
Query: 689 HHIFTVGID 715
HH+F G+D
Sbjct: 374 HHMFATGLD 382
Score = 36.7 bits (81), Expect = 0.63
Identities = 31/78 (39%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRF--XXXXXXXXXXXXXXIVE-NGAGTG*TVYPPLS--- 222
N L+PL++GA D+AFPRIN I F I E A TG T+Y PLS
Sbjct: 161 NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGE 220
Query: 223 --SNIAHRGRSVDLLFFH 270
N A+ G + LL H
Sbjct: 221 GMGNQANAGVDLMLLGLH 238
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/68 (47%), Positives = 39/68 (57%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
L+QHLF FFGHPEVYILILP GIIS ++ +K F F+V A
Sbjct: 248 LWQHLFWFFGHPEVYILILPTMGIISEVL-PTFSRKPIFGYAFVAYSGVAIGFLGFLVWA 306
Query: 689 HHIFTVGI 712
HH+F VG+
Sbjct: 307 HHMFAVGL 314
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/69 (47%), Positives = 41/69 (59%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N L+PL+LGA D+AF R+NNI F +VE GAGTG TVY PL+ +H
Sbjct: 86 NYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHS 145
Query: 241 GRSVDLLFF 267
G +VDL F
Sbjct: 146 GPAVDLAIF 154
Score = 59.7 bits (138), Expect = 8e-08
Identities = 33/85 (38%), Positives = 42/85 (49%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
LAIFSLHL+G SS ++ +PLF AV TA A
Sbjct: 151 LAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAA 210
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
+T+ + DRN NTSFF+ AGGGD +
Sbjct: 211 GLTMGIFDRNFNTSFFEYAGGGDAV 235
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/67 (47%), Positives = 37/67 (55%)
Frame = +2
Query: 512 YQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AH 691
YQHLF FGHPEVYILILP GIIS +I +K F F V +H
Sbjct: 251 YQHLFWTFGHPEVYILILPAMGIISEVI-PVHARKMLFGYSVMVFSTALIGFMGFTVWSH 309
Query: 692 HIFTVGI 712
H+FTVG+
Sbjct: 310 HMFTVGM 316
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/67 (40%), Positives = 37/67 (55%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P L+QH+F FFGHPEVYIL+LP G++S +I Q ++ + F V
Sbjct: 238 PRLFQHIFWFFGHPEVYILVLPAMGLVSEVI-QRMARRRAYGYTAIAISSVAIASISFAV 296
Query: 683 *AHHIFT 703
HH+FT
Sbjct: 297 WMHHMFT 303
Score = 40.3 bits (90), Expect = 0.051
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 237
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 238 RGRSVDLLFFHYI 276
+ VDL+ I
Sbjct: 144 KSIGVDLILLGII 156
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 60.1 bits (139), Expect = 6e-08
Identities = 29/54 (53%), Positives = 35/54 (64%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 222
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 81 NWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 60.1 bits (139), Expect = 6e-08
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIIS 598
P LYQHLF FFGHPEVYI+ILPGFGIIS ++S
Sbjct: 234 PVLYQHLFWFFGHPEVYIMILPGFGIISLLLS 265
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N L P++LG D+ +PR+N +E G+GTG T+YPPLS+++++
Sbjct: 88 NYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNV 147
Query: 241 GRSVDLLFF 267
G +D + F
Sbjct: 148 G--IDFIIF 154
Score = 33.5 bits (73), Expect = 5.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 658 NWVIRIHCLSSSYIHCRYRYDTRAYFTSATIIIAGP 765
N +R+ L +SY+H R+ YFT+ TI+IA P
Sbjct: 285 NSFVRLFGLGTSYVHIRFGSRYSRYFTTVTILIALP 320
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 59.7 bits (138), Expect = 8e-08
Identities = 29/71 (40%), Positives = 39/71 (54%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P L+QHLF F GHPEVYI+++P GI S +I+ +K F FIV
Sbjct: 290 PVLFQHLFWFLGHPEVYIVLIPALGITSEVIA-TNARKPIFGYKAMIGSILGIAVLSFIV 348
Query: 683 *AHHIFTVGID 715
AHH+F G++
Sbjct: 349 WAHHMFVTGMN 359
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 59.7 bits (138), Expect = 8e-08
Identities = 30/70 (42%), Positives = 41/70 (58%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
L+QH+F FFGHPEVYI++LP FG+IS I+ + G + F V A
Sbjct: 233 LFQHIFWFFGHPEVYIILLPVFGLISTIV-EVIGFRCVFSTVAMIYSMILIAILGMFVWA 291
Query: 689 HHIFTVGIDM 718
HH+F VG+D+
Sbjct: 292 HHMFVVGMDV 301
Score = 56.4 bits (130), Expect = 7e-07
Identities = 32/83 (38%), Positives = 40/83 (48%)
Frame = +3
Query: 261 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 440
+F++HL GISS SF LF+ A ITA AG +
Sbjct: 150 MFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGV 209
Query: 441 TILLTDRNLNTSFFDPAGGGDPI 509
T++L DRN NTSF+D GGGD I
Sbjct: 210 TLILCDRNFNTSFYDVVGGGDLI 232
Score = 46.4 bits (105), Expect = 8e-04
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N +P++ G PD+ FPR+NN+ F + E G G G T+YP L H
Sbjct: 83 NYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHS 142
Query: 241 GRSVDLLFF 267
+ D + F
Sbjct: 143 SLACDFVMF 151
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/70 (44%), Positives = 39/70 (55%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
L+QH F FGHPEVYILILPGFG+IS +I +K + + V A
Sbjct: 249 LWQHYFWIFGHPEVYILILPGFGMISEVI-PVFSRKPIYGYTFVAASSVAIVLLGYGVWA 307
Query: 689 HHIFTVGIDM 718
HH+F VG+ M
Sbjct: 308 HHMFAVGLGM 317
Score = 37.1 bits (82), Expect = 0.48
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N VPL++GA D+AFPR+N+ F + + G Y PLSS
Sbjct: 99 NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSS 158
Query: 241 GRSVD 255
+ VD
Sbjct: 159 LQGVD 163
Score = 35.1 bits (77), Expect = 1.9
Identities = 23/83 (27%), Positives = 33/83 (39%)
Frame = +3
Query: 261 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 440
I L + GI S S ++PLFV + + A A+
Sbjct: 166 IIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILALPALNSAL 225
Query: 441 TILLTDRNLNTSFFDPAGGGDPI 509
+LL DR L ++FFDP GG +
Sbjct: 226 AMLLIDRWLGSAFFDPTRGGSAV 248
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/71 (42%), Positives = 38/71 (53%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
+++HLF FGHPEVYILILP FGI S +I +K F F+V
Sbjct: 239 IWEHLFWIFGHPEVYILILPAFGIFSEVI-PVFARKRLFGYSSMVFAIVLIGFLGFMVWV 297
Query: 689 HHIFTVGIDMI 721
HH+FT G+ I
Sbjct: 298 HHMFTTGLGPI 308
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/69 (43%), Positives = 37/69 (53%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P +YQHLF F+ HP VYI+ILP FG+IS +I +K F IV
Sbjct: 239 PVVYQHLFWFYSHPAVYIMILPFFGVISEVI-PVHARKPIFGYRAIAYSSLAISFLGLIV 297
Query: 683 *AHHIFTVG 709
AHH+FT G
Sbjct: 298 WAHHMFTSG 306
Score = 40.3 bits (90), Expect = 0.051
Identities = 27/85 (31%), Positives = 34/85 (40%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
L I SL L G SS +PLF A+ T+ A
Sbjct: 156 LWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLSTPVLAS 215
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
A+ +L D TSFF+P GGGDP+
Sbjct: 216 ALILLSFDLIAGTSFFNPVGGGDPV 240
Score = 36.3 bits (80), Expect = 0.83
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 222
N L+PL++G D+AFPR+N + F V G T YPPLS
Sbjct: 94 NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLS 146
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/69 (43%), Positives = 38/69 (55%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P L+ +LF +GHPEVYI+ILP FGI S IIS +K+ F F+V
Sbjct: 268 PMLWANLFWIWGHPEVYIVILPAFGIFSEIIS-SFARKQLFGYKAMVGSIIAISVLSFLV 326
Query: 683 *AHHIFTVG 709
HH FT+G
Sbjct: 327 WTHHFFTMG 335
Score = 40.7 bits (91), Expect = 0.039
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 228
N +VPL +GA D+AFP +NN+ F ++ G T Y PL+SN
Sbjct: 120 NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASN 175
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 56.4 bits (130), Expect = 7e-07
Identities = 27/69 (39%), Positives = 37/69 (53%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
L+QHLF FFGHPEVYI ILP GI+SHI+ ++ ++V
Sbjct: 278 LWQHLFWFFGHPEVYIAILPAMGIVSHILINSM-RRPLLSHRVVIGSMISIGFLSYVVWG 336
Query: 689 HHIFTVGID 715
HH+F G++
Sbjct: 337 HHMFVSGMN 345
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 56.0 bits (129), Expect = 1e-06
Identities = 30/72 (41%), Positives = 38/72 (52%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P LYQHLF FFGHPEVY++ILP FG+ S I Q +V
Sbjct: 212 PLLYQHLFWFFGHPEVYVVILPVFGLFSSSI-QLSSLHRIPGELSLVLAMASIALIGSVV 270
Query: 683 *AHHIFTVGIDM 718
AHH++T G+D+
Sbjct: 271 WAHHMYTAGLDI 282
Score = 43.2 bits (97), Expect = 0.007
Identities = 26/84 (30%), Positives = 40/84 (47%)
Frame = +3
Query: 258 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 437
++FSLHLAGI+S + L LF ++ + + A
Sbjct: 132 SVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLLVLSLPVLAVG 189
Query: 438 ITILLTDRNLNTSFFDPAGGGDPI 509
IT++LTD++L T F+D GGDP+
Sbjct: 190 ITLILTDKHLGTCFYDATMGGDPL 213
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 56.0 bits (129), Expect = 1e-06
Identities = 30/67 (44%), Positives = 35/67 (52%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
L+QHLF FFGHPEVY+L LP FGI+S II +K F V A
Sbjct: 255 LWQHLFWFFGHPEVYVLALPFFGIVSEII-PVFSRKPMFGYVGLIFATLSIGALSMAVWA 313
Query: 689 HHIFTVG 709
HH+F G
Sbjct: 314 HHMFVTG 320
Score = 41.5 bits (93), Expect = 0.022
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAH 237
N ++PL +GAPD+AFPR+N F + GA G T+Y PLS I
Sbjct: 105 NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHS 164
Query: 238 RGRSVDL 258
G D+
Sbjct: 165 PGLGSDM 171
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/67 (41%), Positives = 37/67 (55%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
+Y +LF +GHPEVYIL+LP FGI S ++S GK+ F F+V
Sbjct: 275 MYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAGKR-LFGHKSMIYASGAISVLGFMVWL 333
Query: 689 HHIFTVG 709
HH FT+G
Sbjct: 334 HHFFTMG 340
Score = 39.1 bits (87), Expect = 0.12
Identities = 27/72 (37%), Positives = 35/72 (48%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N +VPL +GA D+AFP +N++ F V N A TG YPPL A
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPL----AEL 180
Query: 241 GRSVDLLFFHYI 276
G S D+ +YI
Sbjct: 181 GFSPDVGVDYYI 192
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P L QHLF FFGHPEVY+LI+P FG I+ I+ ++ ++V
Sbjct: 389 PILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTRR-VASKHHMIWAIYVMAYMGYLV 447
Query: 683 *AHHIFTVGID 715
HH++ VG+D
Sbjct: 448 WGHHMYLVGLD 458
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 55.2 bits (127), Expect = 2e-06
Identities = 27/63 (42%), Positives = 32/63 (50%)
Frame = +2
Query: 530 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 709
FFGHPEVY+LILP FGI+SHI F +V AHH+F VG
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVG 60
Query: 710 IDM 718
D+
Sbjct: 61 YDV 63
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 55.2 bits (127), Expect = 2e-06
Identities = 29/69 (42%), Positives = 36/69 (52%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P +Y +LF +GHPEVYILILP FG+ S + S GK+ F F V
Sbjct: 272 PMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGKR-LFGHHSMIYASGAIAVLGFAV 330
Query: 683 *AHHIFTVG 709
HH FT+G
Sbjct: 331 WLHHFFTMG 339
Score = 36.3 bits (80), Expect = 0.83
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 241 GRSVD 255
G VD
Sbjct: 184 GVGVD 188
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 53.6 bits (123), Expect = 5e-06
Identities = 27/73 (36%), Positives = 38/73 (52%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P L+QHLF FFGHPEVYI+ +P G++S II ++ F F +
Sbjct: 250 PILWQHLFWFFGHPEVYIIFIPALGMVSSIIITFT-QRPIFGYIPIVLSIVAIGFIGFGL 308
Query: 683 *AHHIFTVGIDMI 721
HH+FT G+ +
Sbjct: 309 WVHHMFTAGLPQL 321
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 53.2 bits (122), Expect = 7e-06
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P L+QHLF F+ HP VYI++LP FG++S +++ +K F F
Sbjct: 254 PVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA-TYSRKNIFGYRAVAYSSLGIAFVGFFA 312
Query: 683 *AHHIFTVG 709
HH+F G
Sbjct: 313 WGHHMFVSG 321
Score = 35.5 bits (78), Expect = 1.5
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 228
N ++PL+LGA D+AFPR+N + ++ G TG T Y P S++
Sbjct: 110 NFMLPLMLGAKDVAFPRLNLLSL-YIYLAGAVLALWGMLNGGLDTGWTFYTPYSAH 164
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 53.2 bits (122), Expect = 7e-06
Identities = 27/72 (37%), Positives = 39/72 (54%)
Frame = +2
Query: 500 RPNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 679
+P L+QHLF F+ HP VYI+ILP G++S I++ +K F FI
Sbjct: 276 QPLLWQHLFWFYSHPAVYIMILPAMGMVSDILAC-FSRKPIFGYKPMVYSICGIAGLGFI 334
Query: 680 V*AHHIFTVGID 715
V HH+F G++
Sbjct: 335 VWGHHMFVSGMN 346
Score = 38.7 bits (86), Expect = 0.16
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVE-NGAGTG*TVYPPLS 222
N L+PL++GA D+AFP +N + + + +GA G T YPPLS
Sbjct: 114 NFLIPLMIGADDMAFPTLNMLSYWFMWPAFFFFGGAFFCDGHGAAAGWTSYPPLS 168
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 52.8 bits (121), Expect = 9e-06
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = +2
Query: 512 YQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AH 691
+ ++F FGHPEVYILILP FG+ S I S G K F F+V H
Sbjct: 295 FLNMFWLFGHPEVYILILPAFGVYSEIFSTFSG-KVLFGYKSLVWATISIAFLSFLVWLH 353
Query: 692 HIFTVG 709
H FT+G
Sbjct: 354 HFFTMG 359
Score = 33.5 bits (73), Expect = 5.9
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 240
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 241 GRSVD 255
G VD
Sbjct: 204 GIGVD 208
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/73 (35%), Positives = 38/73 (52%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
L+QHLF FFGHPEVYI+ LP G++S I++ ++ F F +
Sbjct: 246 LWQHLFWFFGHPEVYIIFLPAVGMVSSIVATFT-QRPVFGYLAMVMALIATGVLAFGLWV 304
Query: 689 HHIFTVGIDMIHE 727
HH+F G+ + E
Sbjct: 305 HHMFVAGLPRLGE 317
Score = 41.1 bits (92), Expect = 0.029
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +3
Query: 351 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGD 503
S D++PLFV ++ +T+F A T L+ DR + T FF+PA GGD
Sbjct: 193 SLDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGD 243
Score = 35.1 bits (77), Expect = 1.9
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +1
Query: 67 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 246
LVPL++G IAFPR+N + V+ G G Y PLS G+
Sbjct: 98 LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGK 157
Query: 247 SVDL 258
D+
Sbjct: 158 RADI 161
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/72 (37%), Positives = 40/72 (55%)
Frame = +2
Query: 500 RPNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 679
+P L+QHLF F+ HP VYI++LP G++S ++S +K F FI
Sbjct: 279 QPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASLGFI 337
Query: 680 V*AHHIFTVGID 715
V HH+FT G++
Sbjct: 338 VWGHHMFTSGMN 349
Score = 34.7 bits (76), Expect = 2.5
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 222
N L+PL++GA D+AFP++N + + G G T YP L+
Sbjct: 118 NFLIPLMIGADDMAFPKLNMLSYWFMWPAIACFGMSFKYAGGPAAGWTSYPVLA 171
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/70 (37%), Positives = 36/70 (51%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
L+ HLF FFGHPEVYIL+ P G ++ +IS G K + F+V
Sbjct: 238 LWDHLFWFFGHPEVYILLFPALGAMADVISTFSG-KPIYAKRYILTAFLIATIISFVVWM 296
Query: 689 HHIFTVGIDM 718
HH+F G ++
Sbjct: 297 HHMFITGTNI 306
Score = 42.7 bits (96), Expect = 0.010
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAH 237
N +VPL +GA D+AFPR+N + + E+GA G T+Y PL++ I
Sbjct: 88 NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYT 147
Query: 238 RGRSVDL 258
G +DL
Sbjct: 148 PGIGLDL 154
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/57 (49%), Positives = 33/57 (57%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 231
N LVP+++GAPD+AFPR+NNI F VE GAGTG TV LS I
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/73 (36%), Positives = 36/73 (49%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P L+QHLF FFGHPEVYI+ LP G++S I+ + F +
Sbjct: 313 PLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV-PTMARTPLVGYRFVVLALVGTAFLSFGL 371
Query: 683 *AHHIFTVGIDMI 721
HH+FT GI +
Sbjct: 372 WVHHMFTTGIPQL 384
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/70 (38%), Positives = 35/70 (50%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P L+QHLF FFGHPEVYI+ LP G++S I+ + F +
Sbjct: 254 PLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV-PTMARHPLVGYRLIVVALIGTGFFSFGL 312
Query: 683 *AHHIFTVGI 712
HH+FT GI
Sbjct: 313 WVHHMFTTGI 322
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/77 (36%), Positives = 35/77 (45%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P L+QH F F+ HP VY+L+LP FGI S + +K F IV
Sbjct: 254 PVLFQHFFWFYSHPAVYVLVLPVFGIFSELF-PVYARKPLFGYRFVAIASFGITFLSLIV 312
Query: 683 *AHHIFTVGIDMIHEHI 733
AHH+F G HI
Sbjct: 313 WAHHMFYTGTPNWMRHI 329
Score = 40.3 bits (90), Expect = 0.051
Identities = 25/85 (29%), Positives = 34/85 (40%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
L I ++ L+GISS F ++P+FV G
Sbjct: 171 LWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTG 230
Query: 435 AITILLTDRNLNTSFFDPAGGGDPI 509
+LL D + TSFF P GGGDP+
Sbjct: 231 GAVMLLFDLSFGTSFFRPEGGGDPV 255
Score = 36.7 bits (81), Expect = 0.63
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS 222
N L+P ++GAPD+AFP++N F G A +G YPP+S
Sbjct: 103 NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMS 157
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/67 (44%), Positives = 34/67 (50%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
LY +L +GHPEVYILILP FGI S IIS K F F+V
Sbjct: 269 LYINLIWAWGHPEVYILILPSFGIFSEIISY-ICVKSVFSYISLIYATISITVLSFLVWL 327
Query: 689 HHIFTVG 709
HH FT+G
Sbjct: 328 HHFFTMG 334
Score = 37.1 bits (82), Expect = 0.48
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 222
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLS 172
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 50.4 bits (115), Expect = 5e-05
Identities = 26/73 (35%), Positives = 38/73 (52%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P L+QHLF FGHPEVYI+ LP G+++ ++ G K F F +
Sbjct: 270 PLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVG-KPLFGYGFAVAAVVTMSFLSFGL 328
Query: 683 *AHHIFTVGIDMI 721
AHH+F G+ ++
Sbjct: 329 WAHHMFATGLPIL 341
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 50.0 bits (114), Expect = 6e-05
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIIS 598
P L+QHLF FGHPEVYI+ILP +GI+ ++S
Sbjct: 266 PILWQHLFWIFGHPEVYIMILPAWGILGDVLS 297
Score = 43.6 bits (98), Expect = 0.005
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAH 237
N L+PL++GA D+AFPR+N F G AG G T Y PLS+N+
Sbjct: 112 NLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVGM 171
Query: 238 RGRSVDLL 261
G L+
Sbjct: 172 PGMGQTLV 179
Score = 33.5 bits (73), Expect = 5.9
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
L + ++ + G+SS ++ +LPL + + +TA
Sbjct: 178 LVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRLPLTIWGLWLTAILNALFVPVLGS 237
Query: 435 AITILLTDRNLNTSFFDPA-----GGGDPI 509
A +LL DR+ T FF GGGDPI
Sbjct: 238 AALLLLLDRSFGTEFFVAGASAVRGGGDPI 267
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 625
P L+Q LF FFGHPEVYILILP G++S ++ + ++E F
Sbjct: 226 PVLWQQLFWFFGHPEVYILILPAMGLVSELL-PKMARREIF 265
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/68 (39%), Positives = 33/68 (48%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
L+QHLF FGHPEVYI+ LP G IS I+ + E F +
Sbjct: 246 LWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTELIGYRWVVAAAISLAVLSFGLWV 304
Query: 689 HHIFTVGI 712
HH+FT GI
Sbjct: 305 HHMFTTGI 312
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P L+QH F F+ HP VYI++LP +IS ++ +K F F
Sbjct: 247 PVLFQHFFWFYSHPAVYIMVLPAMAVISEVVC-AFSRKNIFGYKAVAYSSLGIAFVGFFT 305
Query: 683 *AHHIFTVG 709
HH+FT G
Sbjct: 306 WGHHMFTSG 314
Score = 39.5 bits (88), Expect = 0.089
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 225
N L+P+++GA D+AFP++N + F +V+ GA TG T Y P S+
Sbjct: 103 NFLLPIMIGAKDVAFPKLNLLSF-YVYLAGAVVALFGMVQGGADTGWTFYTPYST 156
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/67 (40%), Positives = 34/67 (50%)
Frame = +1
Query: 67 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 246
L PL +GAP +A PR+ N+ F + G G VYPP SS +AH
Sbjct: 72 LXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSG 131
Query: 247 SVDLLFF 267
+VDL F
Sbjct: 132 AVDLGIF 138
Score = 35.9 bits (79), Expect = 1.1
Identities = 30/84 (35%), Positives = 33/84 (39%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
L IF LHLAGISS ++ LF A
Sbjct: 135 LGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPVLAA 194
Query: 435 AITILLTDRNLNTSFFDPAGGGDP 506
AIT+L R N SFF P G P
Sbjct: 195 AITMLXXXRXXNXSFFXPXXXGXP 218
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 48.0 bits (109), Expect = 3e-04
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +3
Query: 246 IRRLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 425
+ L +F +HL G SS +F + LFV +
Sbjct: 98 VTALYVFVMHLLGASSIATAVNFLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPS 157
Query: 426 XAGAITILLTDRNLNTSFFDPAGGGDP-IYINI 521
AGA+T+L D+ L T+FF+PA GGDP IY NI
Sbjct: 158 LAGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNI 190
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P +YQ++F F+ HP VY+ +LP FG S II ++ F F +
Sbjct: 184 PLIYQNIFWFYSHPVVYVQVLPVFGFYSEII-PVFARRPLFGYTSMVFAVWAITAVSFFL 242
Query: 683 *AHHIFTVGI 712
HH+F G+
Sbjct: 243 WIHHMFVSGV 252
Score = 37.9 bits (84), Expect = 0.27
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 228
N L+PL++GA D+AFPR+N + + I N T T YPP S N
Sbjct: 38 NFLLPLMIGAKDVAFPRLNALSWWAFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN 93
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
L+ HLF FFGHPEVYI+ P G+++ G++ F+V
Sbjct: 252 LWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLVALQSFVVWM 310
Query: 689 HHIFTVGIDM 718
HH+F GI++
Sbjct: 311 HHMFLTGINL 320
Score = 33.1 bits (72), Expect = 7.8
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 225
N LVPL +GA D+AFPR+N + + G T+Y PL++
Sbjct: 89 NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNT 143
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +2
Query: 377 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 481
M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P L+Q F F+ HP VY+++LP GI++ + S +K F +V
Sbjct: 238 PVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS-TFARKPLFGYRQMVWAQMGIVVLGTMV 296
Query: 683 *AHHIFTVG 709
AHH+FTVG
Sbjct: 297 WAHHMFTVG 305
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 46.8 bits (106), Expect = 6e-04
Identities = 26/67 (38%), Positives = 33/67 (49%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
LY +LF +GHPEVY ++LP FG IS II +K F + V
Sbjct: 293 LYTNLFWIWGHPEVYFVVLPAFGFISEII-PTFAEKPLFGYATMVIATFAIGGISWGVWL 351
Query: 689 HHIFTVG 709
HH FT+G
Sbjct: 352 HHFFTMG 358
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 46.4 bits (105), Expect = 8e-04
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 231
N L+PL+LGA D+AF R+NNI F +VE GAGTG TV SS +
Sbjct: 86 NYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/70 (35%), Positives = 33/70 (47%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P LYQ F F+ HP VY+++LP GI + + S +K F IV
Sbjct: 246 PVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS-TMARKPLFGYRVMVYSMLAIVLVSCIV 304
Query: 683 *AHHIFTVGI 712
HH+F VGI
Sbjct: 305 WLHHMFAVGI 314
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/68 (38%), Positives = 32/68 (47%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
L+QHLF FGHPEVYI+ LP G IS I+ + F +
Sbjct: 246 LWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTGLLGYGWIVAAAVALGVLSFGLWV 304
Query: 689 HHIFTVGI 712
HH+FT GI
Sbjct: 305 HHMFTTGI 312
Score = 33.5 bits (73), Expect = 5.9
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 67 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 246
L+P +LG+ D+AFPR+ F + +G +YPPLSS + G
Sbjct: 98 LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGI 157
Query: 247 SVD 255
+ D
Sbjct: 158 NSD 160
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +1
Query: 517 TFILIFWTS*SLYFNFTRIWDNFPYYFTRKRKKRNLWLFRNNLCYTSNWVIRIHCLSSSY 696
T ILI W S+Y F IW++F T W+ N L + SNW I C+S +
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPH 60
Query: 697 IHCR 708
+H R
Sbjct: 61 VHSR 64
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 207
N VP+++G+PD+AFPR+NNI F +VE G G+G TV
Sbjct: 84 NWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 207
N L+PL++GA D++F R+NNI F +VE+GAGTG TV
Sbjct: 81 NYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/71 (33%), Positives = 33/71 (46%)
Frame = +2
Query: 500 RPNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 679
RP L+QHLF F HP VY+++LP GI+S + ++ F
Sbjct: 263 RPLLWQHLFWMFAHPWVYVVVLPAMGIVSDAL-PTFCRRPLVAYEAVAVSTVATMLIGFE 321
Query: 680 V*AHHIFTVGI 712
V HH+F GI
Sbjct: 322 VWVHHMFATGI 332
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 43.2 bits (97), Expect = 0.007
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P L+QHLF FGHPEVYI+ LP + + I+ ++ F +
Sbjct: 270 PLLWQHLFWIFGHPEVYIIFLPLIALAAMIV-PTAARQPIVGYSWIVLSAVGTGFLSFGL 328
Query: 683 *AHHIFTVGI 712
HH+FT G+
Sbjct: 329 WVHHMFTTGL 338
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 42.3 bits (95), Expect = 0.013
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +2
Query: 503 PNLYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 682
P Y HLF F HPEVY+L++P G++ ++ + +K + F
Sbjct: 230 PIAYAHLFWFTFHPEVYVLVIPAIGMMYEMVPR-FSRKPIYSYNSGLFAFVLLTIVGFSS 288
Query: 683 *AHHIFTVGIDMIHEHI 733
AHH+F G+ + +
Sbjct: 289 WAHHMFATGMSFTEKTV 305
Score = 40.7 bits (91), Expect = 0.039
Identities = 27/83 (32%), Positives = 36/83 (43%)
Frame = +3
Query: 261 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 440
IF L + GISS S Q+PL + ++ A A+
Sbjct: 149 IFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYLSSSLIVLVALPTFAAAL 208
Query: 441 TILLTDRNLNTSFFDPAGGGDPI 509
+LLTDR + FF+PA GGDPI
Sbjct: 209 LMLLTDRLGVSGFFNPAVGGDPI 231
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 41.1 bits (92), Expect = 0.029
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 688
++++LF +FGHPEVY+L+LPG G + +S + + +V
Sbjct: 259 MWENLFWYFGHPEVYLLLLPGTGAMFDYLS-NLNHRPPYLKKWMIAAMGAISVDSVMVFL 317
Query: 689 HHIFTVGI 712
HH F GI
Sbjct: 318 HHTFMTGI 325
Score = 33.5 bits (73), Expect = 5.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 67 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSS 225
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSS 164
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 40.7 bits (91), Expect = 0.039
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +1
Query: 61 N*LVPLILGAPDIAFPRINNIRF 129
N LVPL+LGAPD+AFPR+NN+ F
Sbjct: 64 NWLVPLMLGAPDMAFPRMNNMSF 86
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 40.7 bits (91), Expect = 0.039
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 172 IVENGAGTG*TVYPPLSSNIAHRGRSVDLLFF 267
+VE G G G TVYPPL+S + H G SVD F
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIF 43
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 39.5 bits (88), Expect = 0.089
Identities = 22/51 (43%), Positives = 27/51 (52%)
Frame = +3
Query: 357 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPI 509
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PI
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPI 62
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 38.3 bits (85), Expect = 0.21
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 548 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDM 718
VY++ILP FG++SH + G + + V AHH+FTVG+D+
Sbjct: 1 VYVIILPVFGLVSHSL-HRGGLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTVGLDV 56
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 38.3 bits (85), Expect = 0.21
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = +3
Query: 105 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT 236
P NK +KIL TPL Y N C K C + +NSLP Y T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLT 122
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 36.3 bits (80), Expect = 0.83
Identities = 26/73 (35%), Positives = 34/73 (46%)
Frame = +3
Query: 255 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 434
L IFSL + S + D++ L ++ ITA AG
Sbjct: 129 LXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSLPVLAG 188
Query: 435 AITILLTDRNLNT 473
AIT+LLTDRN+NT
Sbjct: 189 AITMLLTDRNMNT 201
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.5
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 542 PEVYILILPGFGIISHIISQERGKK 616
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 34.7 bits (76), Expect = 2.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 512 YQHLF*FFGHPEVYILILPGFGIISHIIS 598
YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 231 YQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
Score = 33.5 bits (73), Expect = 5.9
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +3
Query: 264 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG-AI 440
FS+ L G +S +++L +FV A + AF G A+
Sbjct: 148 FSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LAAFVLQLIFVPVLGTAV 206
Query: 441 TILLTDRNLNTSFFDPAGGGDPI-YINI 521
T+L D+ + T FFD A GGD + Y N+
Sbjct: 207 TMLTFDKYIGTHFFDAAAGGDALTYQNL 234
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.1 bits (72), Expect = 7.8
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 509 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 613
L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 225 LWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,731,823
Number of Sequences: 1657284
Number of extensions: 9913414
Number of successful extensions: 22506
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 20615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22285
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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