Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120442.Seq
         (766 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1187 + 24667044-24667091,24667196-24667274,24667520-246676...    29   4.1  
09_06_0309 - 22206812-22206884,22207008-22207103,22207531-222076...    28   7.1  

>07_03_1187 +
           24667044-24667091,24667196-24667274,24667520-24667695,
           24668216-24668766,24669080-24669941
          Length = 571

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +1

Query: 616 RNLWLFRNNLCYTSNWV--IRIHCLSSSYIHC 705
           + LWL+R+   +  +WV   RI C  S+  HC
Sbjct: 24  QRLWLYRSRFGFYYSWVWGYRISCFRSTQSHC 55


>09_06_0309 -
           22206812-22206884,22207008-22207103,22207531-22207619,
           22207738-22207820,22207932-22208048,22208132-22208319,
           22208430-22208500,22208570-22208782,22210022-22210081,
           22210186-22210476,22210590-22211894
          Length = 861

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 475 HFLILLEEETQFISTFILIFWT 540
           H L+L      F STF+L+FWT
Sbjct: 570 HSLLLSSRIGMFFSTFLLLFWT 591


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,946,434
Number of Sequences: 37544
Number of extensions: 265097
Number of successful extensions: 471
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)