Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120439.Seq
(829 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51217| Best HMM Match : TUDOR (HMM E-Value=0) 37 0.023
SB_36998| Best HMM Match : TUDOR (HMM E-Value=0) 37 0.023
SB_35821| Best HMM Match : TUDOR (HMM E-Value=0) 36 0.030
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_27288| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.053
SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28) 35 0.093
SB_42869| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_18985| Best HMM Match : TUDOR (HMM E-Value=8.3e-37) 30 2.0
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_16601| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_20347| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-20) 29 3.5
SB_33380| Best HMM Match : Herpes_capsid (HMM E-Value=3) 29 4.6
SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24) 29 4.6
SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0) 29 6.1
SB_5975| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_41386| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_5423| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_51217| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 652
Score = 36.7 bits (81), Expect = 0.023
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 25 WHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKMLAEFVTDLPAVACQIVIE 195
W+RA + E I T VL+VD+GN +P + LR +L + LP +A ++
Sbjct: 121 WYRAQIQECIFNRDTTTVKVLYVDYGNTEYLPSTRLRHLLEKHAA-LPKMAIHCTLD 176
>SB_36998| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 2538
Score = 36.7 bits (81), Expect = 0.023
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +1
Query: 25 WHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKMLAEFVTDLPA 171
W+RA++ + L G V F+D+GN+ P++ +R++ EF++ LPA
Sbjct: 291 WYRALITKD-LRDASGFIEVKFMDYGNIQRTPLTDVRELKDEFLS-LPA 337
Score = 36.7 bits (81), Expect = 0.023
Identities = 23/79 (29%), Positives = 39/79 (49%)
Frame = +1
Query: 25 WHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKMLAEFVTDLPAVACQIVIEDFP 204
W+RAV+ + P T HV +VD GN +PV L + F+ LP A + + FP
Sbjct: 1546 WYRAVITA-VEDP---TFHVRYVDFGNTECLPVDRLAPISPSFL-QLPTQAVRCSLHGFP 1600
Query: 205 KQATAEMLAKARRFMSGRT 261
+ +++A+ + +T
Sbjct: 1601 ADKSRQIVAQLNEELKDKT 1619
Score = 36.3 bits (80), Expect = 0.030
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +1
Query: 25 WHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKMLAEFVTDLPAVACQIVIEDFP 204
W+RA VLE G GTA V +VD+GN + + L +++ + +LPA A + + P
Sbjct: 2107 WYRAEVLEV----GEGTATVRYVDYGNTESLSTTRL-SPISDSLLELPAQAVRCTLYSIP 2161
Query: 205 KQATAEMLA 231
+++A
Sbjct: 2162 ITKAEQVVA 2170
Score = 35.1 bits (77), Expect = 0.070
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +1
Query: 76 AHVLFVDHGNVAEVPVSSLRKMLAEFVTDLPAVACQIVIEDFP 204
AHV +VD+GN +PV L ++++ + DLPA A + +++ P
Sbjct: 1928 AHVRYVDYGNKEWLPVQRL-SLISDVLLDLPAQAVRCMLQGVP 1969
Score = 34.7 bits (76), Expect = 0.093
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 25 WHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKMLAEFV-TDLPAVAC 180
W+RAVV + G + VL+VD+GN +PVS + + EF + AV C
Sbjct: 1115 WYRAVVTKV----HGNSIEVLYVDYGNAEVIPVSRAKILKPEFAKLPMQAVEC 1163
Score = 32.7 bits (71), Expect = 0.37
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +1
Query: 25 WHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKMLAEFVTDLPAVACQIVIE 195
W+RA ++L G + V F+D+GN V + LR A+F+ +LP A + +E
Sbjct: 79 WYRA----RLLAVKGAQSEVYFIDYGNTEHVSLEFLRNAPAKFL-NLPPQAYECEVE 130
Score = 32.3 bits (70), Expect = 0.49
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +1
Query: 25 WHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKMLAEFVTDLPAVACQIVIEDFP 204
W+RA +IL +AHV +VD+GN + + LR + E + +LPA A + + D
Sbjct: 2298 WYRA----EILTTKDNSAHVRYVDYGNEEVLSMDRLRAIKCEQL-ELPAQAVKCRLADLA 2352
Query: 205 KQATAEMLAKARRFMSGRT 261
L + + +T
Sbjct: 2353 AGQAEHFLTRLNEVCAEKT 2371
Score = 31.9 bits (69), Expect = 0.65
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 82 VLFVDHGNVAEVPVSSLRKMLAEFVT-DLPAVACQIVIEDFPK--QATAEMLAK 234
V FVD+GN +P S LR M EF++ A++C++ F K T E++ K
Sbjct: 750 VQFVDYGNSEIMPPSQLRAMRPEFMSLSAQAISCELEHLGFNKSHHFTKELIEK 803
Score = 31.5 bits (68), Expect = 0.86
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 25 WHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKMLAEFVTDLP 168
W+RA+V E G V F+D+GN +P ++K++ F +DLP
Sbjct: 525 WYRAIVTEVQESKKVG---VQFIDYGNCESLPPKRIKKLVPRF-SDLP 568
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 25 WHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKMLAEFV-TDLPAVACQI 186
W+RA++ + I G G V F D+GN E+ + ++++ EF+ L AV C +
Sbjct: 1354 WYRAII-QSIQGAKG---IVQFSDYGNSQEIQMKDVKEIAPEFLELPLQAVPCSL 1404
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1
Query: 25 WHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKMLAEFVTDLP 168
W+RA +LE T V ++D+GN +P + L KMLA +LP
Sbjct: 933 WYRARILEV----SRNTVTVQYIDYGNSETLPNNRL-KMLASKFAELP 975
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 22 EWHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVS 126
+W+RA +IL +V FVD+GN VPVS
Sbjct: 2507 QWYRA----EILSTSEDGVYVRFVDYGNERTVPVS 2537
>SB_35821| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 754
Score = 36.3 bits (80), Expect = 0.030
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +1
Query: 16 SSEWHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKMLAEFVTDLP--AVACQI 186
S++W R V + + P TA V FVD GN AEVP+S LR + F + LP A+ C +
Sbjct: 415 STDWFRGFV--ESVTPNC-TARVYFVDFGNTAEVPISQLRPIDDRF-SALPYCALKCSL 469
>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 36.3 bits (80), Expect = 0.030
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +1
Query: 16 SSEWHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKMLAEFVTDLP--AVACQI 186
S++W R V + + P TA V FVD GN AEVP+S LR + F + LP A+ C +
Sbjct: 1696 STDWFRGFV--ESVTPNC-TARVYFVDFGNTAEVPISQLRPIDDRF-SALPYCALKCSL 1750
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 25 WHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKMLAEFVT 159
W R +V E ++ G A V FVD+GN V + +L+ + +F T
Sbjct: 1256 WSRCIV-ENVMP--GRAAKVFFVDYGNTEMVGLPALQPLAEQFTT 1297
>SB_27288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 35.5 bits (78), Expect = 0.053
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 10 PPSSEWHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKMLAEFVTDLP--AVACQ 183
P W+RA V + GT V +VD+G+V VP +RK L E T LP AV C
Sbjct: 327 PQDESWYRAKVTKD---NNDGTVEVFYVDYGDVGTVPKYRMRK-LREEQTWLPFQAVECY 382
Query: 184 I 186
+
Sbjct: 383 L 383
>SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28)
Length = 1282
Score = 34.7 bits (76), Expect = 0.093
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +1
Query: 22 EWHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKMLAEFVTDLPAVA 177
+W+RA +IL +V FVD+GN VPVS ++++ EF+ LP A
Sbjct: 107 QWYRA----EILSTSEDGVYVRFVDYGNEETVPVSKVKEIKEEFLA-LPCQA 153
>SB_42869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +1
Query: 25 WHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKMLAEFVTDLP--AVACQI 186
W+R+ VL P V ++D+G + + SSLR++ ++F++ LP AV C +
Sbjct: 358 WYRSQVLGPTASPD--EVEVKYLDYGGYSRIAASSLRQLRSDFLSCLPFQAVECYL 411
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +2
Query: 146 RSSSPTC-RPSPARSSLKISRNKQRPRCLRRRVGS*AAGQGSRRPAARPGLRQAGRRHLR 322
RS SP R S +RS + R ++R R RRR S + R +R R RRH R
Sbjct: 212 RSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSRSRSPRRRHSR 271
Query: 323 DPRPGAPRSDDR 358
P R R
Sbjct: 272 SRSPTHRRHRSR 283
>SB_18985| Best HMM Match : TUDOR (HMM E-Value=8.3e-37)
Length = 1219
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 25 WHRAVVLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKML 144
W+RA V+ G +AHV ++D+GN +P +SL K L
Sbjct: 727 WYRAQVISVESG-NPLSAHVRYIDYGNDEVLPPASLTKKL 765
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 30.3 bits (65), Expect = 2.0
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +2
Query: 47 NRFWGPAAAPRTCCSWTTATLPRCRSPRCGRCWRSSSPTCRPSPARSSLKISR-NKQRPR 223
+R P+A RT S + + RSP R R S+ R S + S ++++ +K+RPR
Sbjct: 987 SRSVSPSAVKRTKGSKRSESRSVSRSPERDRKGRDSAKKERQSHSESPQRVTKSSKERPR 1046
Query: 224 CLRRRVGS*AAGQGSRRPAARPGLRQAGRRHLRDPR 331
R RRP++ P R +R PR
Sbjct: 1047 KRPRHQSR------ERRPSSSPPRRSRPQRTSPSPR 1076
>SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/37 (35%), Positives = 26/37 (70%)
Frame = +1
Query: 82 VLFVDHGNVAEVPVSSLRKMLAEFVTDLPAVACQIVI 192
V+F+D GNV+ V ++SL+K+ + + LP A ++++
Sbjct: 664 VMFLDFGNVSRVKLTSLKKITPQLL-QLPFQAFEVML 699
>SB_16601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 67 GGTAHVLFVDHGNVAEVPVSSLRKMLAEF 153
G + VL+VD+GN +PVS + + EF
Sbjct: 31 GNSIEVLYVDYGNAEVIPVSRAKILKPEF 59
>SB_20347| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-20)
Length = 1074
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +3
Query: 159 RPAGRRLPDRH*RFPETSNGRDACEGASVHERPDKARAAQL 281
RP R P R +++ R AC SVH R RAA L
Sbjct: 1020 RPVQRLYPIEEVRCADSTVNRSACADRSVHTRARSTRAAAL 1060
>SB_33380| Best HMM Match : Herpes_capsid (HMM E-Value=3)
Length = 474
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Frame = -3
Query: 170 AGRSVTNSASIFRSEETGTSATL---PWSTNSTCAVPP----PGPRICSSTTALCHSEE 15
A S+T SA+ S + S +L P ST+ST + P P I S+ C+S+E
Sbjct: 135 ASTSLTTSAAFTSSTSSAASTSLTTSPVSTSSTSSAASTSLTPAPNILSAAATECYSDE 193
>SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24)
Length = 565
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 82 VLFVDHGNVAEVPVSSLRKMLAEFVTDLPAVACQIVI 192
V VD+GN A VP L++ML +F+ LP A + ++
Sbjct: 53 VSLVDYGNTAWVPEKCLKRMLPQFL-HLPFQAIECLL 88
>SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 709
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 206 NKQRPRCLRRRVGS*AAGQGSRRPAARPGLRQAGRRHLRDPRP-GAPRSDD-RVTRD 370
++ +PR RR G + + +P +RP R + R + R P P +PR DD + RD
Sbjct: 466 SRLKPRASRRPPGE--STLVTSQPNSRPSSRPSSRPNSRSPSPTPSPRLDDSEIARD 520
>SB_5975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 229
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 40 VLEQILGPGGGTAHVLFVDHGNVAEVPVSSLRKMLAEFVTDLPAVACQIVIEDFPKQ 210
++ ++ G G V+++ H +SSL K EF+T P++ C E P Q
Sbjct: 112 LMHKLRKAGIGKRPVIWITHSMGGSEFLSSLHKRFLEFLTTHPSLDCVSFGETVPMQ 168
>SB_41386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 28.3 bits (60), Expect = 8.0
Identities = 23/64 (35%), Positives = 27/64 (42%)
Frame = +2
Query: 179 ARSSLKISRNKQRPRCLRRRVGS*AAGQGSRRPAARPGLRQAGRRHLRDPRPGAPRSDDR 358
++ S K R RPR R + A G R P A R+A R P PG S R
Sbjct: 132 SKESSKAKRPTSRPRPPSRLLTKRAWTPGRRTPFA---CRRAPTPGRRTPTPGRRASSRR 188
Query: 359 VTRD 370
TRD
Sbjct: 189 KTRD 192
>SB_5423| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 512 LMVRFIWYQHQQFDVFKIQLSLLESNNLYFFQIF 613
+M+ F+W Q F + I L E N+ YFF F
Sbjct: 158 VMIVFVWIQATVFAIAPIGLGWYEFNSHYFFCTF 191
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,011,713
Number of Sequences: 59808
Number of extensions: 531129
Number of successful extensions: 1531
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2323539746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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