Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120439.Seq
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53338-2|AAA96190.2| 558|Caenorhabditis elegans Ammonium transp... 31 1.0
U43283-3|AAC69024.2| 880|Caenorhabditis elegans Hypothetical pr... 30 2.3
U41274-6|AAA82462.1| 601|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z70203-4|CAA94107.1| 322|Caenorhabditis elegans Hypothetical pr... 29 3.1
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 29 3.1
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 29 3.1
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 29 3.1
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 29 3.1
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 29 3.1
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 3.1
U53338-3|AAA96191.1| 534|Caenorhabditis elegans Ammonium transp... 29 4.1
AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde dehy... 29 4.1
AC024748-2|AAF60412.1| 236|Caenorhabditis elegans Hypothetical ... 29 4.1
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z36282-2|CAA85288.3| 240|Caenorhabditis elegans Hypothetical pr... 29 5.4
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 5.4
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 28 7.1
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 28 7.1
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 28 7.1
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 28 9.4
>U53338-2|AAA96190.2| 558|Caenorhabditis elegans Ammonium
transporter homolog protein4 protein.
Length = 558
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 404 IYMATSETSSAGCVLRKCVFYNVYLY*GVKVTFIF*LMVRFIWY 535
++ ATS T +G V +C F N Y V T ++ ++ + W+
Sbjct: 101 VFAATSATIVSGAVAERCEFANYITYCSVISTLVYPILTHWGWH 144
>U43283-3|AAC69024.2| 880|Caenorhabditis elegans Hypothetical
protein T25G12.6 protein.
Length = 880
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = -3
Query: 233 FASISAVACFGKSSMTIWQATAGRSVTNSASIFRSEETGTSATLPWSTNSTCAVPPPGP 57
FA ISA ++ T+ Q T RSV++S I S +GT+ T+P + CA P GP
Sbjct: 176 FAMISAT---DQTPPTLSQMTC-RSVSDSTLITTSGPSGTTVTVP---TTPCASVPTGP 227
>U41274-6|AAA82462.1| 601|Caenorhabditis elegans Hypothetical
protein T04G9.6 protein.
Length = 601
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 14 PPPNGTERWCWNRFWGPAAAPRTCCSWTTA 103
P NG CW + P TC SW TA
Sbjct: 467 PDTNGIYTNCWETEYEQPLPPHTCVSWKTA 496
>Z70203-4|CAA94107.1| 322|Caenorhabditis elegans Hypothetical
protein C05G5.4 protein.
Length = 322
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 103 NVAEVPVSSLRKMLAEFV-TDLPAVACQIVIEDFPKQATAEMLAKARRFMSGRTRLAPPS 279
+V VP S+ + E + ++P V C + E P+ + K+R +TRL P+
Sbjct: 94 SVIYVPASAAGSAIEEAMDAEIPLVVC--ITEGIPQHDMVRV--KSRLLKQNKTRLVGPN 149
Query: 280 CP 285
CP
Sbjct: 150 CP 151
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 29.5 bits (63), Expect = 3.1
Identities = 27/96 (28%), Positives = 40/96 (41%)
Frame = +2
Query: 62 PAAAPRTCCSWTTATLPRCRSPRCGRCWRSSSPTCRPSPARSSLKISRNKQRPRCLRRRV 241
PA+ T S T L + ++P + S PT P +SS S +K R LR+R+
Sbjct: 80 PASTAPTSASATAPDLKKEKAP----AEKPSKPTAPPGVQKSSSSPSASKAESRPLRKRI 135
Query: 242 GS*AAGQGSRRPAARPGLRQAGRRHLRDPRPGAPRS 349
+ + +R R+ R RD R A S
Sbjct: 136 SPPPSENREKEKQSRDKERRRSRSP-RDRRGRATTS 170
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 62 PAAAPRTCCSWTTATLPRCRSPRCGRCWRSSSPTCRPSPARSSLKISRNKQRPRCLR 232
P+ + T S +++ RCR + + +P +PA S+ SR RP CLR
Sbjct: 498 PSGSQSTPASASSSAASRCRMKGFFKVFSKKAPASTSTPASSTPGTSR-AARPECLR 553
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 62 PAAAPRTCCSWTTATLPRCRSPRCGRCWRSSSPTCRPSPARSSLKISRNKQRPRCLR 232
P+ + T S +++ RCR + + +P +PA S+ SR RP CLR
Sbjct: 549 PSGSQSTPASASSSAASRCRMKGFFKVFSKKAPASTSTPASSTPGTSR-AARPECLR 604
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.1
Identities = 26/70 (37%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Frame = +2
Query: 149 SSSPTCRPSPARSSLKISRNKQRPRCLRRRVGS*AAGQGSRRPAARPGLRQAGRRHLRD- 325
SSS S +RSS S + R R RRR A G R R G G R RD
Sbjct: 24 SSSSGSSSSGSRSSSSSSSGRSRSRSPRRRDTRPPARGGRSRSPIRRGSPPRGARADRDR 83
Query: 326 ---PRPGAPR 346
P P PR
Sbjct: 84 PMRPSPSPPR 93
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 62 PAAAPRTCCSWTTATLPRCRSPRCGRCWRSSSPTCRPSPARSSLKISRNKQRPRCLR 232
P+ + T S +++ RCR + + +P +PA S+ SR RP CLR
Sbjct: 549 PSGSQSTPASASSSAASRCRMKGFFKVFSKKAPASTSTPASSTPGTSR-AARPECLR 604
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 143 WRSSSPTCRPSPARSSLKISRNKQRPRCLRRRVGS*AAG--QGSRRPAARPGLR-QAG 307
W++ PT RPS + SS + RNK++ C G + G G P +PG R +AG
Sbjct: 54 WQAMIPTTRPS-SGSSFLLGRNKRQAEC---NCGEQSRGCPAGPPGPPGQPGARGEAG 107
>U53338-3|AAA96191.1| 534|Caenorhabditis elegans Ammonium
transporter homolog protein1 protein.
Length = 534
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 404 IYMATSETSSAGCVLRKCVFYNVYLY*GVKVTFIF*LMVRFIWYQH 541
++ AT+ T +G V +C F Y V TFI+ ++ + W ++
Sbjct: 120 VFSATAATIVSGAVAERCEFITYVTYCTVISTFIYPVLTHWGWTEN 165
>AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde
dehydrogenase protein 5 protein.
Length = 437
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 79 HVLFVDHGNVAEVPVSSLRKMLAEFVTDLPAVACQIVIEDFPK-QATAEMLAKARRFMSG 255
H+++ VA++ +++ K L +L C +V+ED + +A+ +A+ + G
Sbjct: 183 HIIYTGCPPVAKIIMAAAAKHLTPVTLELGG-KCPVVVEDDADIEISAQRIARGKWLNCG 241
Query: 256 RTRLAP 273
+T LAP
Sbjct: 242 QTCLAP 247
>AC024748-2|AAF60412.1| 236|Caenorhabditis elegans Hypothetical
protein Y110A2AR.3a protein.
Length = 236
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 140 IFRSEETGTSATLPWSTNSTCAVPPPGPRICSSTTA 33
I S + T+ T S +S A PPP P +STTA
Sbjct: 193 IRNSRPSTTTTTASSSLSSAFAAPPPAPSSSTSTTA 228
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/71 (33%), Positives = 28/71 (39%)
Frame = +2
Query: 146 RSSSPTCRPSPARSSLKISRNKQRPRCLRRRVGS*AAGQGSRRPAARPGLRQAGRRHLRD 325
R SP+ SP SR+K P RRR S + RR + QA RR R
Sbjct: 411 RRRSPSASKSPPAPKRAKSRSKSPPAPRRRRSPSQSKSPAPRRRRSPSKSPQAPRRR-RS 469
Query: 326 PRPGAPRSDDR 358
P RS R
Sbjct: 470 PSGSKSRSPRR 480
>Z36282-2|CAA85288.3| 240|Caenorhabditis elegans Hypothetical
protein K10G9.2 protein.
Length = 240
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 159 RPAGRRLPDRH*RFPETSNGRDAC--EGASVHERPDKARAAQLPVRGCDKQDVGI 317
RP RL D H R +T D C E +S RPD+ A+ + C + VGI
Sbjct: 16 RPDENRLTDLHHR--DTIAALDLCQLEPSSPAPRPDEISASTMNACSCSSEIVGI 68
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Frame = -3
Query: 290 PDGQLGGASLVRPLMNRRAFAS--ISAVACFGKSSMTIWQATAGRSVTNSA-SIFRSEET 120
P+G G S RP+ ++ FA+ + V+ ++ T T S T + S + T
Sbjct: 553 PEGFQVGQSQYRPIEKKQGFATLPLRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTT 612
Query: 119 GTSATLPWSTNSTCAVPPPGPRICSSTTA 33
T+ T P T ST +STTA
Sbjct: 613 TTTTTTPKPTTSTSTSTSTTTTTTTSTTA 641
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Frame = -3
Query: 290 PDGQLGGASLVRPLMNRRAFAS--ISAVACFGKSSMTIWQATAGRSVTNSA-SIFRSEET 120
P+G G S RP+ ++ FA+ + V+ ++ T T S T + S + T
Sbjct: 553 PEGFQVGQSQYRPIEKKQGFATLPLRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTT 612
Query: 119 GTSATLPWSTNSTCAVPPPGPRICSSTTA 33
T+ T P T ST +STTA
Sbjct: 613 TTTTTTPKPTTSTSTSTSTTTTTTTSTTA 641
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 95 TTATLPRCRSPRCGRCWRSSSPTCRPSPARSSLKISRNKQRPRCLRRRV 241
+TA+ R S R P+C S ++ KIS NK+ P LR+R+
Sbjct: 1346 STASRVRILSDSSDESNREEGPSC--SNSKKLTKISGNKKNPAILRKRL 1392
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 95 TTATLPRCRSPRCGRCWRSSSPTCRPSPARSSLKISRNKQRPRCLRRRV 241
+TA+ R S R P+C S ++ KIS NK+ P LR+R+
Sbjct: 1346 STASRVRILSDSSDESNREEGPSC--SNSKKLTKISGNKKNPAILRKRL 1392
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 143 WRSSSPTCRPSPARSSLKISRNKQRPRC 226
W++ PT RPS + SS + RNK++ +C
Sbjct: 54 WQAMIPTTRPS-SGSSFLLGRNKRQAQC 80
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -1
Query: 535 IPNKTDH*LKDKCHFHPSI*---IYIIKNAFPQYTSRT*SLRRRHINYVVF 392
+P H L + ++ PS+ ++I N Q+ S++RRH+ YV+F
Sbjct: 607 LPEALMHILSNAEYYSPSLFHQSAHLITNFVYQFPEELSSIQRRHVPYVIF 657
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -3
Query: 770 ISYCFLQCPQDEIE-YYSRSTRIAENTYIYTSR 675
++ C L+ PQ ++ YYS S AE T++ TSR
Sbjct: 354 VALCKLRYPQPFMQPYYSLSFNPAEGTFLLTSR 386
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,447,780
Number of Sequences: 27780
Number of extensions: 398511
Number of successful extensions: 1341
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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