Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120438.Seq
(792 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q04719 Cluster: Early 53 kDa protein; n=5; Nucleopolyhe... 182 9e-45
UniRef50_O10368 Cluster: Early 53 kDa protein; n=8; Nucleopolyhe... 90 7e-17
UniRef50_Q9GYG1 Cluster: Putative uncharacterized protein; n=2; ... 39 0.12
UniRef50_Q66111 Cluster: Me53; n=2; Granulovirus|Rep: Me53 - Cry... 39 0.17
UniRef50_Q0IL92 Cluster: Me53; n=2; Nucleopolyhedrovirus|Rep: Me... 37 0.50
UniRef50_Q7KT68 Cluster: CG18518-PA; n=1; Drosophila melanogaste... 36 1.5
UniRef50_Q8IQ18 Cluster: CG33196-PB; n=10; Endopterygota|Rep: CG... 35 2.0
UniRef50_UPI00004D77F7 Cluster: nephronectin; n=5; Tetrapoda|Rep... 35 2.7
UniRef50_Q24PY9 Cluster: Sensor protein; n=2; Desulfitobacterium... 35 2.7
UniRef50_Q54Z32 Cluster: Putative uncharacterized protein; n=1; ... 35 2.7
UniRef50_Q4RMT7 Cluster: Chromosome 3 SCAF15018, whole genome sh... 34 3.6
UniRef50_Q9IBR3 Cluster: ORF7 me53; n=3; Nucleopolyhedrovirus|Re... 34 3.6
UniRef50_Q8CDL1 Cluster: Adult male testis cDNA, RIKEN full-leng... 34 3.6
UniRef50_Q04RY4 Cluster: Thymidylate synthase; n=4; Leptospira|R... 34 3.6
UniRef50_A2QZC5 Cluster: Remark: the ORF contains many Prolins; ... 34 3.6
UniRef50_UPI0000E217B1 Cluster: PREDICTED: hypothetical protein;... 34 4.7
UniRef50_A5FKT6 Cluster: Putative uncharacterized protein; n=1; ... 34 4.7
UniRef50_UPI00006CE630 Cluster: hypothetical protein TTHERM_0070... 33 6.2
UniRef50_Q4J1Z5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_Q8LPR4 Cluster: At5g56885; n=9; core eudicotyledons|Rep... 33 6.2
UniRef50_Q5CJR2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_UPI0000F2B253 Cluster: PREDICTED: similar to mKIAA0284 ... 33 8.2
UniRef50_UPI00006A1B98 Cluster: Ubiquitin carboxyl-terminal hydr... 33 8.2
UniRef50_Q30L76 Cluster: Gp69; n=1; Listeria phage P100|Rep: Gp6... 33 8.2
UniRef50_Q1EB74 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
UniRef50_Q5KA98 Cluster: PAB-dependent poly(A)-specific ribonucl... 33 8.2
>UniRef50_Q04719 Cluster: Early 53 kDa protein; n=5;
Nucleopolyhedrovirus|Rep: Early 53 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 449
Score = 182 bits (443), Expect = 9e-45
Identities = 108/182 (59%), Positives = 115/182 (63%), Gaps = 3/182 (1%)
Frame = +3
Query: 255 VSKKPVVNRKDGYFVPPEFGNKLESLPAYSDKLDFKQERDLRMHFMSDLERNIMKATLKF 434
VSKKPVVNRKDGYFVPPEFGNK E LPAYSDKLDFKQERDLRMHFMSDLER+IMKATLKF
Sbjct: 72 VSKKPVVNRKDGYFVPPEFGNKFEGLPAYSDKLDFKQERDLRMHFMSDLERDIMKATLKF 131
Query: 435 STNYIMGYINSKDMRMTGKFASSSVNTKRLRSST*AIRDAPLAIIDSKTTRAHGFCMLWF 614
STNYIMGYINSKDMRMTGKFAS V K+ R TR ++
Sbjct: 132 STNYIMGYINSKDMRMTGKFASRPVKYKKTMEHMSDSRCTTCNYRFKDNTREWFLYVVVH 191
Query: 615 TSKSRWTILTA*TYAVKNAIYITTFQRPRTKY-ILPSI--WSTSAI*PERGFYQYIFPVS 785
K K +Y P+T Y I PSI S + ER FYQYIFPVS
Sbjct: 192 IEKPLDDPDRIDICCQKCYLYHNV---PKTSYEIYPSINLVDLSYLARERFFYQYIFPVS 248
Query: 786 LE 791
LE
Sbjct: 249 LE 250
Score = 180 bits (438), Expect = 4e-44
Identities = 81/92 (88%), Positives = 83/92 (90%)
Frame = +2
Query: 485 GQICKQFCKYKKTTEQHMSDSRCTTCNYRFKDNTRAWFLYVVVHIEKPLDDSDRIDICCQ 664
G+ + KYKKT E HMSDSRCTTCNYRFKDNTR WFLYVVVHIEKPLDD DRIDICCQ
Sbjct: 149 GKFASRPVKYKKTME-HMSDSRCTTCNYRFKDNTREWFLYVVVHIEKPLDDPDRIDICCQ 207
Query: 665 KCYLYHNVPKTSYEIYPSINLVDLSYLARERF 760
KCYLYHNVPKTSYEIYPSINLVDLSYLARERF
Sbjct: 208 KCYLYHNVPKTSYEIYPSINLVDLSYLARERF 239
Score = 109 bits (261), Expect = 1e-22
Identities = 53/69 (76%), Positives = 55/69 (79%), Gaps = 3/69 (4%)
Frame = +1
Query: 43 MNRFFRENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR---T 213
MNRFFRENNIFDAP+TGGKGR KSLP P ANSP SPVR PPKSNIKPPTRIS P + T
Sbjct: 1 MNRFFRENNIFDAPRTGGKGRAKSLPAPAANSPPSPVRPPPKSNIKPPTRISPPKQPMCT 60
Query: 214 FSANPLERS 240
A PLE S
Sbjct: 61 SPAKPLEHS 69
>UniRef50_O10368 Cluster: Early 53 kDa protein; n=8;
Nucleopolyhedrovirus|Rep: Early 53 kDa protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 455
Score = 89.8 bits (213), Expect = 7e-17
Identities = 40/75 (53%), Positives = 54/75 (72%)
Frame = +3
Query: 273 VNRKDGYFVPPEFGNKLESLPAYSDKLDFKQERDLRMHFMSDLERNIMKATLKFSTNYIM 452
+N FVPPE+G + + +PA S KL++ ERDLR HF+SD ER MK+ L+F+TNY++
Sbjct: 65 LNEISASFVPPEYGFRFDEVPACSHKLEYACERDLREHFLSDNEREAMKSLLRFATNYVL 124
Query: 453 GYINSKDMRMTGKFA 497
GYINSKDM G+ A
Sbjct: 125 GYINSKDMLTFGRAA 139
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 13/103 (12%)
Frame = +2
Query: 518 KTTEQHMSDSRCTTCNYRFKDNTRAWFLYVVVH------------IEKPLDDSDRIDICC 661
K +++ +S CT C Y+FKDNTR W LYV+V + P + D + C
Sbjct: 144 KNELEYVQESECTMCGYKFKDNTRVWMLYVIVRHPPRAASADEEFVPSP-NTPDCFEFAC 202
Query: 662 QKCYLYHNVPKTSYEIYPSINLVDLSYLARERFLPIH-FPCKF 787
C + S+++YP IN + L F + FP ++
Sbjct: 203 CDCADNYPDQLNSHQVYPGINSLHAQRLVEAGFFYQYVFPLEY 245
>UniRef50_Q9GYG1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 687
Score = 39.1 bits (87), Expect = 0.12
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +1
Query: 58 RENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSN---IKPPTRISLPTRTFSA-N 225
+E + PK + S+P P SP P+ PP ++ + PP LPTR SA N
Sbjct: 518 KEETEEEQPKEENNSTLPSIPIPSIFSPYEPIVPPPATSPDPMNPPIASLLPTRILSATN 577
Query: 226 PLERSISSSM*VKNQSSTEK 285
LE + ++ + +S E+
Sbjct: 578 VLENKYNENVSSRRSTSRER 597
>UniRef50_Q66111 Cluster: Me53; n=2; Granulovirus|Rep: Me53 -
Cryptophlebia leucotreta granulosis virus (ClGV)
(Cryptophlebialeucotreta granulovirus)
Length = 303
Score = 38.7 bits (86), Expect = 0.17
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 551 CTTCNYRFKD-NTRAWFLYVVVHIEKPLDDSD-RIDICCQKCYLYHNVPKTSYEIYPSIN 724
C CN +FK N F+++VV L++SD + CC KC+ E+YP++
Sbjct: 36 CFVCNLQFKQVNNNNPFIFIVV--TNYLNESDDTLKFCCLKCWQNSRGHMDIVELYPTLK 93
Query: 725 LVDLSYL 745
L D+ L
Sbjct: 94 LYDVKKL 100
>UniRef50_Q0IL92 Cluster: Me53; n=2; Nucleopolyhedrovirus|Rep: Me53
- Leucania separata nuclear polyhedrosis virus (LsNPV)
Length = 305
Score = 37.1 bits (82), Expect = 0.50
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +2
Query: 548 RCTTCNYRFKDNTRAWFLYVVVHIEKPLDDSDRIDICCQKCYLYHNVPKTSY---EIYPS 718
RC C RFK W LY +V +P DR + C C+ + + Y E+YP
Sbjct: 39 RCDLCRRRFKPIISRW-LYCLVSKVRP----DRFYLVCLNCWETEGIRDSEYHYFELYPR 93
Query: 719 INLVDLSYLAR 751
+ L D+ L R
Sbjct: 94 LRLTDVWQLCR 104
>UniRef50_Q7KT68 Cluster: CG18518-PA; n=1; Drosophila
melanogaster|Rep: CG18518-PA - Drosophila melanogaster
(Fruit fly)
Length = 332
Score = 35.5 bits (78), Expect = 1.5
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 31 PTVTMNRFFRENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISL-PT 207
P + F N+ A K+ K +K TP SP+ P+ P +S +K P ++S+ PT
Sbjct: 151 PNKSPKTFSMMQNV-PAKKSPIKSLIKKPKTPAVKSPIEPIILPTESQLKSPIKLSISPT 209
Query: 208 RT 213
++
Sbjct: 210 KS 211
>UniRef50_Q8IQ18 Cluster: CG33196-PB; n=10; Endopterygota|Rep:
CG33196-PB - Drosophila melanogaster (Fruit fly)
Length = 23015
Score = 35.1 bits (77), Expect = 2.0
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 82 PKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISL 201
P+ G + S PTPVA +P SP+ P + KP TR S+
Sbjct: 19131 PQQPGVLNIPSYPTPVAPTPQSPIYIPSQEQPKPTTRPSV 19170
>UniRef50_UPI00004D77F7 Cluster: nephronectin; n=5; Tetrapoda|Rep:
nephronectin - Xenopus tropicalis
Length = 622
Score = 34.7 bits (76), Expect = 2.7
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 79 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPP-TRISLPTRTFSANPLERSISSSM 255
APKT K + LP PV PV PP + +PP ++ P P R S+S
Sbjct: 361 APKTTAKPTTRPLPKPVTRPAPKPV--PPPATTRPPQPAVTRPPPPVVTRPAPRP-STSP 417
Query: 256 *VKNQSSTEKMD 291
+K +ST +D
Sbjct: 418 AIKTTTSTVPVD 429
>UniRef50_Q24PY9 Cluster: Sensor protein; n=2; Desulfitobacterium
hafniense|Rep: Sensor protein - Desulfitobacterium
hafniense (strain Y51)
Length = 638
Score = 34.7 bits (76), Expect = 2.7
Identities = 25/97 (25%), Positives = 46/97 (47%)
Frame = -2
Query: 341 VRGQTFQFVTKLGRHKISIFSVDDWFFTYMLLLMLRSNGLAEKVRVGKEMRVGGLMLDFG 162
V + + +TK G + ++FS + + L+L S + EK R+ KEM L+
Sbjct: 366 VLNREVELITKSGIKRTALFSAEKIMIGKEMCLLLVSQDITEKKRLEKEM----ARLE-- 419
Query: 161 G*RTGDSGELATGVGKDLTRPLPPVFGASKMLFSRKK 51
R G++A G+G ++ P+ V G + + + K
Sbjct: 420 --RLDLIGQMAAGIGHEIRNPMTTVRGYLQYISKKDK 454
>UniRef50_Q54Z32 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 250
Score = 34.7 bits (76), Expect = 2.7
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 82 PKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKP-PTRISLPTRTFSANPLERSISSSM* 258
P+T RV + +++SPLSP P +++ P+ +SLP+ ++P S S S
Sbjct: 133 PQTRKSPRVSRSNSSLSSSPLSPSSSPSLLSLQSSPSSLSLPSSPTPSSPSSPSSSPSSP 192
Query: 259 VKNQSSTEKMDILCRPSL 312
SS L PSL
Sbjct: 193 SSPSSSPSSPSSLSSPSL 210
>UniRef50_Q4RMT7 Cluster: Chromosome 3 SCAF15018, whole genome shotgun
sequence; n=3; Euteleostomi|Rep: Chromosome 3 SCAF15018,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 2966
Score = 34.3 bits (75), Expect = 3.6
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 91 GGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANP 228
GG+G ++ PTP A P S V P S+ PPT++ P + +P
Sbjct: 942 GGRGSQRATPTPAA--PASSVTPTPPSSPGPPTKVLAPEGPWVLSP 985
>UniRef50_Q9IBR3 Cluster: ORF7 me53; n=3; Nucleopolyhedrovirus|Rep:
ORF7 me53 - Spodoptera exigua MNPV
Length = 390
Score = 34.3 bits (75), Expect = 3.6
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 354 DFKQERDLRMHFMSDLERNIMKATLKFSTNYIMGYINSKDMR 479
D + +DLR F+S+ +MK L+F+TNY+ G D++
Sbjct: 29 DDSKFKDLRGRFLSNQNFQLMKYVLRFATNYVQGTYLVNDLK 70
>UniRef50_Q8CDL1 Cluster: Adult male testis cDNA, RIKEN full-length
enriched library, clone:4931436F15 product:hypothetical
protein, full insert sequence; n=1; Mus musculus|Rep:
Adult male testis cDNA, RIKEN full-length enriched
library, clone:4931436F15 product:hypothetical protein,
full insert sequence - Mus musculus (Mouse)
Length = 233
Score = 34.3 bits (75), Expect = 3.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 76 DAPKTGGKGRVKSLP-TPVANSPLSPVRQPPKSNIKPPTRISLP 204
DA ++GG+ + + P P P P R PP+S ++PP S P
Sbjct: 78 DAGESGGRRQPERPPQVPAPACPPQPARAPPRSELRPPCTSSRP 121
>UniRef50_Q04RY4 Cluster: Thymidylate synthase; n=4; Leptospira|Rep:
Thymidylate synthase - Leptospira borgpetersenii serovar
Hardjo-bovis (strain JB197)
Length = 524
Score = 34.3 bits (75), Expect = 3.6
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 240 HQQQHVSKKPVVNRKDGYFVPPEFGNKLESLPAYSDKLDFKQE 368
+ + VS++ V +K+ Y+VPPE KL L Y D +DF +
Sbjct: 93 YNSEQVSQRYVEVKKENYYVPPELNGKL--LELYLDAVDFASQ 133
>UniRef50_A2QZC5 Cluster: Remark: the ORF contains many Prolins;
n=7; Trichocomaceae|Rep: Remark: the ORF contains many
Prolins - Aspergillus niger
Length = 333
Score = 34.3 bits (75), Expect = 3.6
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +1
Query: 136 SPLSPVRQPPKSNIKPPTRISLPTRTFSANPLERSISSSM*VKNQSSTEKMDILCRPSLV 315
SPL +R + N PPTR +LPT+ PL S + + +N+ + + D + V
Sbjct: 263 SPLRAIRAARRQN-PPPTRYNLPTKRGPKTPLSASDVTPI-TRNEWNMLRTDFPLGKTTV 320
Query: 316 TNWKVCP 336
T W P
Sbjct: 321 TKWTPSP 327
>UniRef50_UPI0000E217B1 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 149
Score = 33.9 bits (74), Expect = 4.7
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 61 ENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANPLER 237
EN F+ KT GR +SLP P ++PL + +P K + P+ S A P+ R
Sbjct: 92 ENLAFE--KTAEAGRSRSLPPPQCSTPLKQIIKPRKDFLTVPSSRSYDPHVRGALPIPR 148
>UniRef50_A5FKT6 Cluster: Putative uncharacterized protein; n=1;
Flavobacterium johnsoniae UW101|Rep: Putative
uncharacterized protein - Flavobacterium johnsoniae
UW101
Length = 566
Score = 33.9 bits (74), Expect = 4.7
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 309 FGNKLESLPAYSDKLDFKQERDLRMHFMSDLERNIMKATLKFSTNYIMGYIN 464
F N +ES+ +S K + + RD ++ + DL+R+I AT Y YI+
Sbjct: 368 FSNLIESIGGHSIKKNVSESRDSKLGSIQDLDRDIRLATKSQKNLYKQDYID 419
>UniRef50_UPI00006CE630 Cluster: hypothetical protein
TTHERM_00707470; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00707470 - Tetrahymena
thermophila SB210
Length = 1888
Score = 33.5 bits (73), Expect = 6.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -2
Query: 713 DIFRTRSLERCDIDSIFDSICLCGQNRPTAFRCEPQHTKTMRAC 582
DI +T+ L++CDI FDS C + + C+ +T ++C
Sbjct: 776 DINKTQCLQQCDIGQFFDSQMQCQLCQNSCATCDSSNTSFCKSC 819
>UniRef50_Q4J1Z5 Cluster: Putative uncharacterized protein; n=1;
Azotobacter vinelandii AvOP|Rep: Putative
uncharacterized protein - Azotobacter vinelandii AvOP
Length = 213
Score = 33.5 bits (73), Expect = 6.2
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 79 APKTGGKGRVKSLPTPVANSPL-SPVRQPPKSNIKPPT 189
AP GKG +++P P AN+P+ SP P S +P T
Sbjct: 114 APTGSGKGSAQTVPPPYANAPIGSPSGVVPSSRCQPAT 151
>UniRef50_Q8LPR4 Cluster: At5g56885; n=9; core eudicotyledons|Rep:
At5g56885 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1113
Score = 33.5 bits (73), Expect = 6.2
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +1
Query: 76 DAPKTGG-KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSAN----PLERS 240
DAPK GRV P PV+ SP+S + P + PPT ++P R S N P+E+S
Sbjct: 138 DAPKEPPFSGRVT--PAPVS-SPVSDIPPIPSVALPPPTPSNVPPRNASNNHKPPPIEKS 194
Query: 241 IS 246
I+
Sbjct: 195 IA 196
>UniRef50_Q5CJR2 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium hominis|Rep: Putative uncharacterized
protein - Cryptosporidium hominis
Length = 198
Score = 33.5 bits (73), Expect = 6.2
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 82 PKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISL 201
P G+G P P++ SP SP PP S + PP +SL
Sbjct: 94 PSLPGRGSFVLPPVPLSASPPSPPPPPPLSPLPPPAFLSL 133
>UniRef50_UPI0000F2B253 Cluster: PREDICTED: similar to mKIAA0284
protein; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to mKIAA0284 protein - Monodelphis domestica
Length = 1710
Score = 33.1 bits (72), Expect = 8.2
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +1
Query: 124 PVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANPLERSISSSM*VKNQSSTEKMDI 294
P S LSP PP+++ KP T+ S P R S++P RS S T KM I
Sbjct: 852 PSFPSKLSPSPSPPRAHKKPVTQESSPLRPVSSSPSLRSREKEENGTYISMTGKMTI 908
>UniRef50_UPI00006A1B98 Cluster: Ubiquitin carboxyl-terminal
hydrolase 21 (EC 3.1.2.15) (Ubiquitin thioesterase 21)
(Ubiquitin-specific-processing protease 21)
(Deubiquitinating enzyme 21) (NEDD8-specific protease).;
n=1; Xenopus tropicalis|Rep: Ubiquitin carboxyl-terminal
hydrolase 21 (EC 3.1.2.15) (Ubiquitin thioesterase 21)
(Ubiquitin-specific-processing protease 21)
(Deubiquitinating enzyme 21) (NEDD8-specific protease).
- Xenopus tropicalis
Length = 530
Score = 33.1 bits (72), Expect = 8.2
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +1
Query: 79 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANPLERSISSSM* 258
AP GG+ S V++ LS R+ P+ K R+SL R SA+ + + +
Sbjct: 113 APPPGGRAGSLSRSKSVSHGDLSATREKPEEVAKSLARVSLRER--SASSTRKPLLDTSL 170
Query: 259 VKNQSSTEKMDIL 297
+K SS +++ +L
Sbjct: 171 LKRSSSLKRLHVL 183
>UniRef50_Q30L76 Cluster: Gp69; n=1; Listeria phage P100|Rep: Gp69 -
Listeria phage P100
Length = 702
Score = 33.1 bits (72), Expect = 8.2
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +3
Query: 399 LERNIMKATLKFSTNYIMGYINSKDMRMTGKFASSSVNTKRLRSST*AIRDAPLAIIDSK 578
LE +++K T ++ +I++KD R+ G F ++ T RL S+ ++ P D K
Sbjct: 326 LEHSLVKTRKNNFTAKLLNFISNKDGRVHGSFNATGTETTRLSSNNPNMQQLPAKTSDPK 385
>UniRef50_Q1EB74 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 783
Score = 33.1 bits (72), Expect = 8.2
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +1
Query: 46 NRFFRENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 210
NR F + +P +GG +KS +P++ SP SP+RQP +S P I P R
Sbjct: 84 NRPFLRLLVPTSPTSGG---IKSA-SPLSFSPKSPMRQPQRSQTSPLPNIPSPER 134
>UniRef50_Q5KA98 Cluster: PAB-dependent poly(A)-specific
ribonuclease subunit PAN3 (PAB1P- dependent
poly(A)-nuclease); n=1; Filobasidiella neoformans|Rep:
PAB-dependent poly(A)-specific ribonuclease subunit PAN3
(PAB1P- dependent poly(A)-nuclease) - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 684
Score = 33.1 bits (72), Expect = 8.2
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 118 PTPVANSPLSPV-RQPPKSNIKPPTRISLPTRTFSANPLERSISSSM*VKNQSSTE 282
P P SP S + QPPK PP RI T AN L+ SS + V+N +++
Sbjct: 390 PNPPEPSPASALANQPPKRRSSPPERILWSYVTQIANALKAIHSSGLAVRNLDASK 445
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,433,910
Number of Sequences: 1657284
Number of extensions: 16583168
Number of successful extensions: 55868
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 50791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55527
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67496806780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -