Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120437.Seq
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006633-5|AAO21429.1| 506|Caenorhabditis elegans Prion-like-(q... 30 1.9
AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans Prion-like-(q... 30 1.9
Z68161-10|CAN86582.1| 705|Caenorhabditis elegans Hypothetical p... 29 3.2
Z68161-8|CAH60763.1| 625|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z68161-5|CAA92299.2| 764|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z68161-4|CAD89735.1| 781|Caenorhabditis elegans Hypothetical pr... 29 3.2
AY185494-1|AAO26317.1| 764|Caenorhabditis elegans poly ADP-ribo... 29 3.2
AY185493-1|AAO26316.1| 781|Caenorhabditis elegans poly ADP-ribo... 29 3.2
AF016678-2|AAB66153.1| 432|Caenorhabditis elegans Hypothetical ... 29 3.2
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 29 4.3
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 29 4.3
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 29 4.3
Z34801-4|CAA84328.1| 236|Caenorhabditis elegans Hypothetical pr... 28 5.7
AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical... 28 5.7
U88311-5|AAB42343.1| 531|Caenorhabditis elegans Udp-glucuronosy... 28 7.5
U53340-1|AAA96206.1| 658|Caenorhabditis elegans Hypothetical pr... 28 7.5
U41992-5|AAA83356.1| 549|Caenorhabditis elegans Hypothetical pr... 27 9.9
AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical ... 27 9.9
>AC006633-5|AAO21429.1| 506|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 34,
isoform b protein.
Length = 506
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 198 PGTPTPLKSATRGSSPINFMGRSPL*EWRPNPSAL*HPNMTRNMTRLYFRPP 353
P TP P+++ G SP F+ S + + R +A RN R+Y PP
Sbjct: 291 PVTPEPVETPRIGPSPRRFVPASAIPDLRAANAAARSSMHNRNRPRMYNPPP 342
>AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 34,
isoform a protein.
Length = 1128
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 198 PGTPTPLKSATRGSSPINFMGRSPL*EWRPNPSAL*HPNMTRNMTRLYFRPP 353
P TP P+++ G SP F+ S + + R +A RN R+Y PP
Sbjct: 291 PVTPEPVETPRIGPSPRRFVPASAIPDLRAANAAARSSMHNRNRPRMYNPPP 342
>Z68161-10|CAN86582.1| 705|Caenorhabditis elegans Hypothetical
protein F20C5.1d protein.
Length = 705
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 559 IQANANRSDPD--WRYTAVRIFSKTQHKINEGSIFGP 663
+Q + N+ DPD +RY + F +Q K+ E + +GP
Sbjct: 284 LQPDLNKVDPDRNYRYCTIPNFPASQGKLREDNRYGP 320
>Z68161-8|CAH60763.1| 625|Caenorhabditis elegans Hypothetical
protein F20C5.1c protein.
Length = 625
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 559 IQANANRSDPD--WRYTAVRIFSKTQHKINEGSIFGP 663
+Q + N+ DPD +RY + F +Q K+ E + +GP
Sbjct: 128 LQPDLNKVDPDRNYRYCTIPNFPASQGKLREDNRYGP 164
>Z68161-5|CAA92299.2| 764|Caenorhabditis elegans Hypothetical
protein F20C5.1b protein.
Length = 764
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 559 IQANANRSDPD--WRYTAVRIFSKTQHKINEGSIFGP 663
+Q + N+ DPD +RY + F +Q K+ E + +GP
Sbjct: 267 LQPDLNKVDPDRNYRYCTIPNFPASQGKLREDNRYGP 303
>Z68161-4|CAD89735.1| 781|Caenorhabditis elegans Hypothetical
protein F20C5.1a protein.
Length = 781
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 559 IQANANRSDPD--WRYTAVRIFSKTQHKINEGSIFGP 663
+Q + N+ DPD +RY + F +Q K+ E + +GP
Sbjct: 284 LQPDLNKVDPDRNYRYCTIPNFPASQGKLREDNRYGP 320
>AY185494-1|AAO26317.1| 764|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-3 short form protein.
Length = 764
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 559 IQANANRSDPD--WRYTAVRIFSKTQHKINEGSIFGP 663
+Q + N+ DPD +RY + F +Q K+ E + +GP
Sbjct: 267 LQPDLNKVDPDRNYRYCTIPNFPASQGKLREDNRYGP 303
>AY185493-1|AAO26316.1| 781|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-3 long form protein.
Length = 781
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 559 IQANANRSDPD--WRYTAVRIFSKTQHKINEGSIFGP 663
+Q + N+ DPD +RY + F +Q K+ E + +GP
Sbjct: 284 LQPDLNKVDPDRNYRYCTIPNFPASQGKLREDNRYGP 320
>AF016678-2|AAB66153.1| 432|Caenorhabditis elegans Hypothetical
protein K07E8.7 protein.
Length = 432
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -3
Query: 512 ILQRKGRAEKELYDWDVVYRLDIEMKTKMCQGLRQKEKVCK 390
+L R RA + + Y D+E KT + QG KE +CK
Sbjct: 194 VLHRLDRATSGVLLFAKNYETDLEFKTTLKQGEWSKEYICK 234
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 92 LPTKVDISSVEPTDTAIEPVYP 157
LPT++D + PTD A PVYP
Sbjct: 2525 LPTEIDAAQSLPTDDAGMPVYP 2546
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 92 LPTKVDISSVEPTDTAIEPVYP 157
LPT++D + PTD A PVYP
Sbjct: 2588 LPTEIDAAQSLPTDDAGMPVYP 2609
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 92 LPTKVDISSVEPTDTAIEPVYP 157
LPT++D + PTD A PVYP
Sbjct: 2588 LPTEIDAAQSLPTDDAGMPVYP 2609
>Z34801-4|CAA84328.1| 236|Caenorhabditis elegans Hypothetical
protein F59A2.3 protein.
Length = 236
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 357 PKDSVSDPPSFLTDFLL-LTKSLAHFCFHLYVEPINDIP 470
P +V+ P + F + +TK CFHL + P++D P
Sbjct: 112 PSQAVAPVPVAMPPFTVEITKGDQRLCFHLELVPVDDQP 150
>AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical
protein Y57A10A.31 protein.
Length = 1048
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 455 RLDIEMKTKMCQGLRQKEKVCKE--GRRVGNGVFWQWRPKVKSGHISSHVW 309
+LD +++ C +Q++ + + + +F +W P KSG I H W
Sbjct: 583 QLDAKLRATFCMLTKQEDPIMMQDDAQYYVVRIFEEWTPNSKSGVIGVHGW 633
>U88311-5|AAB42343.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein25 protein.
Length = 531
Score = 27.9 bits (59), Expect = 7.5
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 3/118 (2%)
Frame = +2
Query: 293 ISVIAPKHDSKYDPTLLSASIAKRLRFRPSFLPYRLSPSDEVLGTFLFSSLCRAYKRHPN 472
++ I D Y P +S S K F YRLS + + + YK+H
Sbjct: 175 VAAIGEPIDFSYVPGSMSKSGEKMSLFE-KLENYRLSMASSRMQYGQWDKETEIYKKHLG 233
Query: 473 HKVPFQPDLFVEVSISMSTHSFPTRLKLSSKRTQIVRIPTGGTLLSAYF---QKLSIK 637
+ +P DL S++ T+S P + TQ +P GG + QKLSI+
Sbjct: 234 NDIPHWRDLMPSSSVAF-TNSIP-YVDFPRSITQ-KTVPIGGISVDMEMIKSQKLSIE 288
>U53340-1|AAA96206.1| 658|Caenorhabditis elegans Hypothetical
protein F02E8.4 protein.
Length = 658
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +3
Query: 375 DPPSFLTDFLLLTKSLAHFCFHLYVEPINDIPIIKFLFSPTFSLKYQSQ*VLTAFQ-QDS 551
D +F T FL ++ F Y ++DIP K +P +SL+Y S+ + +
Sbjct: 123 DRANFFTQFL--EAKAEYYEFTSYDNRVSDIPNNKLRPTPLYSLQYDSRTTYSGTPGYSN 180
Query: 552 SCHPSERKSFGSRLAV 599
S S + +RLAV
Sbjct: 181 SSEKSGESTSRARLAV 196
>U41992-5|AAA83356.1| 549|Caenorhabditis elegans Hypothetical
protein F32E10.5 protein.
Length = 549
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -3
Query: 92 ERKEYRN-GEDDGFLEDDECQVSGW 21
ER +Y + G D FLED+E + +GW
Sbjct: 277 ERNDYDDSGADSDFLEDEEEEDAGW 301
>AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical
protein Y37H2A.6 protein.
Length = 410
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 405 LLTKSLAHFCFHLYVEPIN-DIPIIKFLFSPTFS 503
+L +S+ CFH YVE D+ I LF P++S
Sbjct: 323 VLLQSVNFQCFHFYVEKAGFDVVEIVRLFDPSYS 356
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,944,442
Number of Sequences: 27780
Number of extensions: 434248
Number of successful extensions: 1197
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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