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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120433.Seq
         (767 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces p...    30   0.42 
SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom...    28   1.7  
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ...    27   2.2  
SPBC365.02c |cox10||protoheme IX farnesyltransferase|Schizosacch...    26   6.8  
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb...    26   6.8  
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ...    26   6.8  
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||...    25   9.0  
SPAC144.16 |||DUF59 family protein|Schizosaccharomyces pombe|chr...    25   9.0  
SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1 |Schizosa...    25   9.0  
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces...    25   9.0  

>SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 728

 Score = 29.9 bits (64), Expect = 0.42
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +3

Query: 237 LYLTPTTVLITKSGVIQLIMKSKLPYAIELQEWLL 341
           +Y   T  L+ K GV+ L+ K KLP+++  ++ ++
Sbjct: 534 IYEVQTRDLLVKDGVVHLVDKVKLPFSVSQKDMII 568


>SPBC354.13 |rga6||GTPase activating protein
           Rga6|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 733

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -3

Query: 582 GQLRRFAARVFAILPSRFSVASSHNISLANKMSDRLLPPNLRWPPSIFASDRQF 421
           G L R +  + ++     +   S ++S  N++S       L++PPS F S RQF
Sbjct: 182 GPLGRSSLNLSSLSHELQTSQDSPSLSATNQLSSSDTLEPLQYPPSSFGSQRQF 235


>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1147

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +3

Query: 408 DVIAKIDDLTQKLTVANAD 464
           D  +KID LT+KL VANA+
Sbjct: 618 DSASKIDSLTEKLKVANAE 636


>SPBC365.02c |cox10||protoheme IX
           farnesyltransferase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 387

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 623 GLAITSCAMSAMRLASCAVSRRAFSQSCRAVSASRRATT 507
           GL+  + A   M  A C++S  AF+QS   +   + A T
Sbjct: 114 GLSFNTLAWLTMGTALCSISANAFNQSMEPMLDCQMART 152


>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 262

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 124 IVNGQYVSTSTASTNRRLSMPTKSSTMLQIAWQSRAT 234
           I  G Y STS +ST+   + P+ SST    +  S +T
Sbjct: 129 ISGGIYSSTSASSTSSSTATPSSSSTTSSSSSSSSST 165


>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
           type |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 827

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +1

Query: 553 NARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGTTSLRFCAAKT 702
           N   + AQ A R+  + Q++   P+ P+L  +L        +L +CA  T
Sbjct: 514 NFALKCAQSAERVVFLLQELAKSPNTPKLFFNLYSGYYALMTLTYCATLT 563


>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1116

 Score = 25.4 bits (53), Expect = 9.0
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = +3

Query: 66   DEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTFEHADQIQHHAPDSVAKQGDPLY 242
            +EQ VRFV++ +   L Y++ +  I  H D K  +     D +   +   ++K  D +Y
Sbjct: 928  EEQLVRFVSRQVLYGLSYLHSKGII--HRDLKADNLLIDFDGVCKISDFGISKHSDNVY 984


>SPAC144.16 |||DUF59 family protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 179

 Score = 25.4 bits (53), Expect = 9.0
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +3

Query: 327 QEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVANADLAEATD 482
           ++WL E    Q     +  P    +  D++AKI+D    LT+A   + +  D
Sbjct: 34  KQWLTEIESEQTNIKEERDPIDPQEIYDLLAKINDPEHPLTLAQLSVVKLED 85


>SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 669

 Score = 25.4 bits (53), Expect = 9.0
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 63  GDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTFEHAD 188
           GDE     V+ D  S    V+  +   ++  GKY+ TF H D
Sbjct: 48  GDEIECIVVSMDDKSKKARVSLRQEDILNALGKYEETFRHVD 89


>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 442

 Score = 25.4 bits (53), Expect = 9.0
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
 Frame = +3

Query: 408 DVIAKIDDLTQKLTVANADLAEATDR---SFCLPTKCCGST 521
           D I  + ++ +  T+   D     +R   +FC   +CCG T
Sbjct: 50  DTIPSLSNVVESQTIPEEDSTSYLNRLEEAFCRDFRCCGQT 90


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,375,940
Number of Sequences: 5004
Number of extensions: 73850
Number of successful extensions: 227
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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