Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120433.Seq
         (767 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    27   0.84 
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   1.9  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   3.4  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   5.9  
DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domai...    23   7.9  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   7.9  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 26.6 bits (56), Expect = 0.84
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +1

Query: 478  PIAHFVCQRNVVARRDAETARQDCENARRETAQL 579
            P+     QR+++  RDA++  + CE A+R TAQL
Sbjct: 1039 PVCPDTLQRHLL--RDADSWSRICEGAKRITAQL 1070


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
 Frame = +3

Query: 240 YLTPTTVLITKSGVIQLIMKS---KLPYAIELQEWLLE---EVIPQVLCTGKYAPAVEMD 401
           YL  T +L+T S V+ + + +   + P    +  W+     E++P+VLC  +     E  
Sbjct: 305 YLLFTMMLVTLSVVVTIAVLNVNFRSPVTHRMAPWVHRVFIELLPKVLCIERPKKEDEPS 364

Query: 402 TNDVIAKIDDLTQKLTV 452
            ND     D LT    V
Sbjct: 365 DNDDQTPTDVLTDVFQV 381


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +1

Query: 520  RDAETARQDCENARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGTTSLR 684
            RDAE+  + CE A+R TA L     D  +  +A   N Q    +A  +     +R
Sbjct: 988  RDAESWSRICEAAKRITASLQQAWDD-ERAALAAHGNEQHFEEVADLEARRAEIR 1041


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 577 LANRMADIAQDVIAKPSNPQ 636
           L NR+ DI+++  A PS+P+
Sbjct: 408 LYNRLRDISEETSALPSHPR 427


>DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -2

Query: 718 AAAQRSFLRRRNANSLCPRRTRPGCGTAAG 629
           A   R+   +R  +S C R   PGC    G
Sbjct: 73  ACGDRTCTNQRKNDSACRRSCNPGCFCRGG 102


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 549 RKRAPRNGAAGQPHGGHCARRDSQTQQPAAVPQ 647
           R+R+PR+G          ARR S++ +P + P+
Sbjct: 258 RRRSPRSGGRWPSCRSPPARRRSRSTRPTSWPR 290


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 893,629
Number of Sequences: 2352
Number of extensions: 20777
Number of successful extensions: 42
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)