Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120432.Seq
(713 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 28 0.087
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 28 0.087
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 28 0.087
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 28 0.087
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 25 0.46
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 21 7.5
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 21 7.5
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 21 7.5
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 21 7.5
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 21 7.5
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 21 9.9
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 21 9.9
AF265213-1|AAF75277.1| 143|Tribolium castaneum putative cytochr... 21 9.9
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 27.9 bits (59), Expect = 0.087
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 302 RLTPRPRTTSDTCLRIQSLEMSLKKSSMTNIGATNQLHRDYKRARQRR 445
RLT R T +R+ S+ +KS M +GA N+ + AR R
Sbjct: 1460 RLTMRRETMKALEVRVNSVMAERRKSHMQTLGAKNEYGNNNVVARNHR 1507
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 27.9 bits (59), Expect = 0.087
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 302 RLTPRPRTTSDTCLRIQSLEMSLKKSSMTNIGATNQLHRDYKRARQRR 445
RLT R T +R+ S+ +KS M +GA N+ + AR R
Sbjct: 1460 RLTMRRETMKALEVRVNSVMAERRKSHMQTLGAKNEYGNNNVVARNHR 1507
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 27.9 bits (59), Expect = 0.087
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 302 RLTPRPRTTSDTCLRIQSLEMSLKKSSMTNIGATNQLHRDYKRARQRR 445
RLT R T +R+ S+ +KS M +GA N+ + AR R
Sbjct: 1460 RLTMRRETMKALEVRVNSVMAERRKSHMQTLGAKNEYGNNNVVARNHR 1507
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 27.9 bits (59), Expect = 0.087
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 302 RLTPRPRTTSDTCLRIQSLEMSLKKSSMTNIGATNQLHRDYKRARQRR 445
RLT R T +R+ S+ +KS M +GA N+ + AR R
Sbjct: 1460 RLTMRRETMKALEVRVNSVMAERRKSHMQTLGAKNEYGNNNVVARNHR 1507
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 25.4 bits (53), Expect = 0.46
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 298 TAFNAPPAYYIRHMFAHPEFRNEFEE 375
T + PP Y IRH F F N+ +
Sbjct: 403 TLYKLPPNYEIRHKFKLWNFNNQISD 428
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 56 HLNAALINDASCMENVNLSAYMQDCVK 136
HL A+ SCME +L Y ++ ++
Sbjct: 145 HLGASSTPTNSCMEYQHLHRYKEEALQ 171
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 21.4 bits (43), Expect = 7.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 473 KIASIGQNCNSASIFEF 523
++A G+N NS+S F F
Sbjct: 492 QVAPTGENSNSSSDFNF 508
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 56 HLNAALINDASCMENVNLSAYMQDCVK 136
HL A+ SCME +L Y ++ ++
Sbjct: 145 HLGASSTPTNSCMEYQHLHRYKEEALQ 171
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 56 HLNAALINDASCMENVNLSAYMQDCVK 136
HL A+ SCME +L Y ++ ++
Sbjct: 145 HLGASSTPTNSCMEYQHLHRYKEEALQ 171
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 21.4 bits (43), Expect = 7.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 473 KIASIGQNCNSASIFEF 523
++A G+N NS+S F F
Sbjct: 440 QVAPTGENSNSSSDFNF 456
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -3
Query: 279 PVRM*RVHQPGYSSN 235
PVR+ VH+PG+ ++
Sbjct: 196 PVRIMGVHRPGFDND 210
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 312 PARVLHQTHVC 344
P RVLHQ VC
Sbjct: 190 PMRVLHQCPVC 200
>AF265213-1|AAF75277.1| 143|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q3 protein.
Length = 143
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 427 TCAPAAFNLMLFQNYKN 477
T A +F LML N+KN
Sbjct: 1 TSAALSFALMLLANHKN 17
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,466
Number of Sequences: 336
Number of extensions: 3516
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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