Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120431X.Seq
         (520 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118918-1|AAM50778.1|  446|Drosophila melanogaster LD22559p pro...   101   6e-22
AE014297-2416|AAF55475.1|  446|Drosophila melanogaster CG18012-P...   101   6e-22
AE014298-691|AAF45995.3|  840|Drosophila melanogaster CG4041-PA ...    29   2.9  
AY121716-1|AAM52043.1|   90|Drosophila melanogaster SD25037p pro...    28   8.7  

>AY118918-1|AAM50778.1|  446|Drosophila melanogaster LD22559p
           protein.
          Length = 446

 Score =  101 bits (242), Expect = 6e-22
 Identities = 43/84 (51%), Positives = 59/84 (70%)
 Frame = +2

Query: 2   LDLPMKVVDMFGAGLPVCAFNFLCLDELVEDGVNGFTFKSGDELAKLVVNWFTGFPDNPE 181
           LDLPMKVVDMFG+GLPVCA++F CLDELV+ G NGF F    +LA+ +  WF  FP NP 
Sbjct: 351 LDLPMKVVDMFGSGLPVCAYDFKCLDELVKHGENGFVFGDHVQLAEQLRIWFENFPKNPS 410

Query: 182 QIALAERMRRELAKFRDSRWEDNW 253
            +      +R++ +F++ RW ++W
Sbjct: 411 ILETRAGFQRKIQEFQELRWRESW 434


>AE014297-2416|AAF55475.1|  446|Drosophila melanogaster CG18012-PA
           protein.
          Length = 446

 Score =  101 bits (242), Expect = 6e-22
 Identities = 43/84 (51%), Positives = 59/84 (70%)
 Frame = +2

Query: 2   LDLPMKVVDMFGAGLPVCAFNFLCLDELVEDGVNGFTFKSGDELAKLVVNWFTGFPDNPE 181
           LDLPMKVVDMFG+GLPVCA++F CLDELV+ G NGF F    +LA+ +  WF  FP NP 
Sbjct: 351 LDLPMKVVDMFGSGLPVCAYDFKCLDELVKHGENGFVFGDHVQLAEQLRIWFENFPKNPS 410

Query: 182 QIALAERMRRELAKFRDSRWEDNW 253
            +      +R++ +F++ RW ++W
Sbjct: 411 ILETRAGFQRKIQEFQELRWRESW 434


>AE014298-691|AAF45995.3|  840|Drosophila melanogaster CG4041-PA
           protein.
          Length = 840

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -1

Query: 274 RSSWRACPVILPARVPELGELAAHPLGERDLLGVVGEAGEPV 149
           R    +C  +LP R P  GEL  HP+ E  LL +  +  +P+
Sbjct: 237 RQLLESCLSVLPKRRPLPGELLEHPIFEEVLLDLKKQKMQPL 278


>AY121716-1|AAM52043.1|   90|Drosophila melanogaster SD25037p
           protein.
          Length = 90

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 176 PEQIALAERMRRELAKFRDSRWEDNWARAPRRS 274
           P++I  A R+R  +  F   R+  N  R PRRS
Sbjct: 19  PDRIRPAPRLRNSMELFHSIRYVFNICRTPRRS 51


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,608,141
Number of Sequences: 53049
Number of extensions: 333747
Number of successful extensions: 1551
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1550
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)