Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120431X.Seq
         (520 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   3.3  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   4.3  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   5.7  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 141 NLASSSPLLNVKPLTPSSTSS 79
           N+A+++PLL  K   PSS +S
Sbjct: 107 NIAAANPLLAEKLAAPSSQAS 127


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -3

Query: 266 LARVPSYPPSASPG 225
           + ++PSY P+++PG
Sbjct: 881 ILKIPSYKPASTPG 894



 Score = 21.0 bits (42), Expect = 7.6
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 165 KPVNQFTTNLASSSPLLNVKPLTPSSTSSSRHRKLKA 55
           KP+++    L    P  +  PL+P S SSS  R  ++
Sbjct: 422 KPLDKCYFCLDGKLPHDDQPPLSPQSDSSSSSRSAES 458


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 135 ASSSPLLNVKPLTPSSTSSSRHRKLKAQTGRPA 37
           +S SP   +     SSTSSS   K  A  G+P+
Sbjct: 509 SSPSPNPRIASAPSSSTSSSPPAKGAAAAGQPS 541


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 12/50 (24%), Positives = 21/50 (42%)
 Frame = -2

Query: 168 GKPVNQFTTNLASSSPLLNVKPLTPSSTSSSRHRKLKAQTGRPAPNMSTT 19
           G+  ++F + + S   + +VKP   S      +  +   T  P    STT
Sbjct: 344 GETKSRFISGIRSEQTIFDVKPEFGSIYFLGNYSLVPTTTASPTTEPSTT 393


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 79  VQAQEVEGANGKTSSKHVHDF 17
           +  QEV G N + S++ V DF
Sbjct: 47  LHCQEVGGKNYEHSTRQVEDF 67


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,984
Number of Sequences: 438
Number of extensions: 1974
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)