Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120430.Seq
(690 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW71 Cluster: RNA-dependent RNA polymerase; n=1; Bomb... 98 2e-19
UniRef50_P35928 Cluster: RNA replicase polyprotein; n=2; Erysimu... 50 7e-05
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 48 3e-04
UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep: Poly... 46 7e-04
UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; ... 45 0.002
UniRef50_P10358 Cluster: RNA replicase polyprotein; n=8; Tymovir... 42 0.014
UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep: Pol... 40 0.043
UniRef50_P20126 Cluster: RNA replicase polyprotein; n=3; Tymovir... 40 0.076
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 38 0.31
UniRef50_Q32WC7 Cluster: Replicase; n=1; Dulcamara mottle virus|... 36 0.71
UniRef50_P36304 Cluster: RNA replicase polyprotein; n=2; Tymovir... 36 0.93
UniRef50_UPI0000E4A21F Cluster: PREDICTED: similar to Cylindroma... 35 2.2
UniRef50_A7TCI1 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.0
UniRef50_UPI000065E9C7 Cluster: KIAA2018 (KIAA2018), mRNA; n=1; ... 33 6.6
UniRef50_Q4S555 Cluster: Chromosome 6 SCAF14737, whole genome sh... 33 6.6
UniRef50_A0BJI8 Cluster: Chromosome undetermined scaffold_110, w... 33 6.6
UniRef50_UPI000023F3F3 Cluster: hypothetical protein FG08939.1; ... 33 8.7
UniRef50_Q4A2Z4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.7
UniRef50_Q74I10 Cluster: Putative uncharacterized protein; n=1; ... 33 8.7
UniRef50_A6PS51 Cluster: Putative uncharacterized protein precur... 33 8.7
UniRef50_A0D1A3 Cluster: Chromosome undetermined scaffold_34, wh... 33 8.7
>UniRef50_Q6AW71 Cluster: RNA-dependent RNA polymerase; n=1; Bombyx
mori Macula-like latent virus|Rep: RNA-dependent RNA
polymerase - Bombyx mori Macula-like latent virus
Length = 1747
Score = 98.3 bits (234), Expect = 2e-19
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = +3
Query: 282 MAFTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLM 422
MAFTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKL+
Sbjct: 1 MAFTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLI 47
Score = 96.7 bits (230), Expect = 5e-19
Identities = 45/48 (93%), Positives = 47/48 (97%)
Frame = +3
Query: 120 FTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLMKIL 263
FTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKL+ +L
Sbjct: 3 FTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLIPLL 50
Score = 72.5 bits (170), Expect = 9e-12
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +2
Query: 509 IHRDAITAPLVETAISNFRHKLQLYPYQVNSKLM 610
IHRDAITAPLVETAISNFRHKLQLYPYQVNSKL+
Sbjct: 14 IHRDAITAPLVETAISNFRHKLQLYPYQVNSKLI 47
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 3 AISNFRHKLQLYPYQVNSKLM 65
AISNFRHKLQLYPYQVNSKL+
Sbjct: 27 AISNFRHKLQLYPYQVNSKLI 47
>UniRef50_P35928 Cluster: RNA replicase polyprotein; n=2; Erysimum
latent virus|Rep: RNA replicase polyprotein - Erysimum
latent virus (ELV)
Length = 1748
Score = 49.6 bits (113), Expect = 7e-05
Identities = 20/47 (42%), Positives = 35/47 (74%)
Frame = +3
Query: 282 MAFTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLM 422
MAF +D L++T HRD+I+APL+++++S + L+L+PY V +L+
Sbjct: 1 MAFQLALDALSSTTHRDSISAPLLDSSVSQLQSSLELFPYTVPKELV 47
Score = 46.0 bits (104), Expect = 9e-04
Identities = 18/45 (40%), Positives = 33/45 (73%)
Frame = +3
Query: 120 FTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLM 254
F +D L++T HRD+I+APL+++++S + L+L+PY V +L+
Sbjct: 3 FQLALDALSSTTHRDSISAPLLDSSVSQLQSSLELFPYTVPKELV 47
Score = 38.7 bits (86), Expect = 0.13
Identities = 14/33 (42%), Positives = 26/33 (78%)
Frame = +2
Query: 512 HRDAITAPLVETAISNFRHKLQLYPYQVNSKLM 610
HRD+I+APL+++++S + L+L+PY V +L+
Sbjct: 15 HRDSISAPLLDSSVSQLQSSLELFPYTVPKELV 47
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 47.6 bits (108), Expect = 3e-04
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = +3
Query: 282 MAFTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSK 416
MAF + + L++T+HRD + APL+E+ R L+LYP+ +N++
Sbjct: 1 MAFQDAFNNLSSTVHRDTVAAPLLESIAQPLRDSLELYPWAINAE 45
Score = 47.2 bits (107), Expect = 4e-04
Identities = 18/56 (32%), Positives = 36/56 (64%)
Frame = +3
Query: 120 FTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLMKILIPYSSSMA 287
F + + L++T+HRD + APL+E+ R L+LYP+ +N++ + +L + S++
Sbjct: 3 FQDAFNNLSSTVHRDTVAAPLLESIAQPLRDSLELYPWAINAEKLDLLKKFGISVS 58
Score = 37.5 bits (83), Expect = 0.31
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 509 IHRDAITAPLVETAISNFRHKLQLYPYQVNSK 604
+HRD + APL+E+ R L+LYP+ +N++
Sbjct: 14 VHRDTVAAPLLESIAQPLRDSLELYPWAINAE 45
>UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep:
Polyprotein - Grapevine rupestris vein feathering virus
Length = 2068
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +3
Query: 129 LVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLMKIL 263
LV+ L T+HRD + +PLVE A R LQLYPY + + K L
Sbjct: 137 LVEILNPTVHRDTVCSPLVEAAAGPLRDSLQLYPYDIPQEHAKFL 181
Score = 46.0 bits (104), Expect = 9e-04
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +3
Query: 267 PYSSSMAFTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQV 407
P S LV+ L T+HRD + +PLVE A R LQLYPY +
Sbjct: 127 PALSGGGLKELVEILNPTVHRDTVCSPLVEAAAGPLRDSLQLYPYDI 173
Score = 39.1 bits (87), Expect = 0.10
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 509 IHRDAITAPLVETAISNFRHKLQLYPYQV 595
+HRD + +PLVE A R LQLYPY +
Sbjct: 145 VHRDTVCSPLVEAAAGPLRDSLQLYPYDI 173
>UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; Oat
blue dwarf virus|Rep: Replicase-associated polyprotein -
Oat blue dwarf virus
Length = 2066
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/46 (41%), Positives = 32/46 (69%)
Frame = +3
Query: 126 NLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLMKIL 263
++++TL++TIHRD I APL+ET S +R L+ +P+ V + + L
Sbjct: 26 DVIETLSSTIHRDTIAAPLMETLASPYRDSLRDFPWAVPASALPFL 71
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = +3
Query: 294 NLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQV 407
++++TL++TIHRD I APL+ET S +R L+ +P+ V
Sbjct: 26 DVIETLSSTIHRDTIAAPLMETLASPYRDSLRDFPWAV 63
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 509 IHRDAITAPLVETAISNFRHKLQLYPYQV 595
IHRD I APL+ET S +R L+ +P+ V
Sbjct: 35 IHRDTIAAPLMETLASPYRDSLRDFPWAV 63
>UniRef50_P10358 Cluster: RNA replicase polyprotein; n=8;
Tymovirus|Rep: RNA replicase polyprotein - Turnip yellow
mosaic virus
Length = 1844
Score = 41.9 bits (94), Expect = 0.014
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 282 MAFTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLM 422
MAF +D LA T HRD P++E+ + + R +Q YP+ + +L+
Sbjct: 1 MAFQLALDALAPTTHRDPSLHPILESTVDSIRSSIQTYPWSIPKELL 47
Score = 41.5 bits (93), Expect = 0.019
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 120 FTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLMKILIPY 272
F +D LA T HRD P++E+ + + R +Q YP+ + +L+ +L Y
Sbjct: 3 FQLALDALAPTTHRDPSLHPILESTVDSIRSSIQTYPWSIPKELLPLLNSY 53
>UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep:
Polyprotein - Maize rayado fino virus
Length = 2027
Score = 40.3 bits (90), Expect = 0.043
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 132 VDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLMKIL 263
V++L T HRD ITAP+VE+ + R L+ YP+ + + L
Sbjct: 14 VESLTPTTHRDTITAPIVESLATPLRRSLERYPWSIPKEFHSFL 57
Score = 39.9 bits (89), Expect = 0.057
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 300 VDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQV 407
V++L T HRD ITAP+VE+ + R L+ YP+ +
Sbjct: 14 VESLTPTTHRDTITAPIVESLATPLRRSLERYPWSI 49
Score = 34.7 bits (76), Expect = 2.2
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 512 HRDAITAPLVETAISNFRHKLQLYPYQV 595
HRD ITAP+VE+ + R L+ YP+ +
Sbjct: 22 HRDTITAPIVESLATPLRRSLERYPWSI 49
>UniRef50_P20126 Cluster: RNA replicase polyprotein; n=3;
Tymovirus|Rep: RNA replicase polyprotein - Eggplant
mosaic virus
Length = 1839
Score = 39.5 bits (88), Expect = 0.076
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +3
Query: 282 MAFTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPY 401
MAF + ++ L +T HRDA T P++ + + R L LYP+
Sbjct: 1 MAFQSALEALNSTTHRDASTNPILNSVVEPLRDSLSLYPW 40
Score = 37.5 bits (83), Expect = 0.31
Identities = 28/96 (29%), Positives = 41/96 (42%)
Frame = +3
Query: 120 FTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLMKILIPYSSSMAFTNL 299
F + ++ L +T HRDA T P++ + + R L LYP+ L K +P+ S N
Sbjct: 3 FQSALEALNSTTHRDASTNPILNSVVEPLRDSLSLYPW----LLPKEAVPHLLSWGIPN- 57
Query: 300 VDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQV 407
L T H I + + N H L P V
Sbjct: 58 -SGLGVTPHPHPIHKTVETFLLFNHWHALARLPSTV 92
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 37.5 bits (83), Expect = 0.31
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 138 TLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLMKIL 263
+LA T HRD I PL+E +R L YP+ + + L L
Sbjct: 97 SLAPTTHRDTIATPLMEALAEPYRQSLSTYPWHIPTNLQPFL 138
Score = 36.3 bits (80), Expect = 0.71
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 306 TLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKL 419
+LA T HRD I PL+E +R L YP+ + + L
Sbjct: 97 SLAPTTHRDTIATPLMEALAEPYRQSLSTYPWHIPTNL 134
>UniRef50_Q32WC7 Cluster: Replicase; n=1; Dulcamara mottle
virus|Rep: Replicase - Dulcamara mottle virus
Length = 1742
Score = 36.3 bits (80), Expect = 0.71
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +3
Query: 282 MAFTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPY 401
MAF + ++ L +T HRDA++ P++ + + + L+ YP+
Sbjct: 1 MAFQSALEALNSTTHRDAVSHPILTSVVRPLQDSLETYPW 40
Score = 33.5 bits (73), Expect = 5.0
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = +3
Query: 120 FTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLMKIL 263
F + ++ L +T HRDA++ P++ + + + L+ YP+ + + + L
Sbjct: 3 FQSALEALNSTTHRDAVSHPILTSVVRPLQDSLETYPWLLPKEALPFL 50
>UniRef50_P36304 Cluster: RNA replicase polyprotein; n=2;
Tymovirus|Rep: RNA replicase polyprotein - Kennedya
yellow mosaic virus (strain Jervis bay) (KYMV)
Length = 1874
Score = 35.9 bits (79), Expect = 0.93
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 282 MAFTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKL 419
MAF +D LA+T H+D P++E+ + LQ YP+ V L
Sbjct: 1 MAFQLALDALASTSHKDPSLHPVLESVHDSLTDSLQTYPWMVPQDL 46
Score = 34.3 bits (75), Expect = 2.9
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 120 FTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLMKILI 266
F +D LA+T H+D P++E+ + LQ YP+ V L L+
Sbjct: 3 FQLALDALASTSHKDPSLHPVLESVHDSLTDSLQTYPWMVPQDLQPFLL 51
>UniRef50_UPI0000E4A21F Cluster: PREDICTED: similar to Cylindromatosis
(turban tumor syndrome); n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Cylindromatosis
(turban tumor syndrome) - Strongylocentrotus purpuratus
Length = 1043
Score = 34.7 bits (76), Expect = 2.2
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +2
Query: 368 QFPSQASTLPISGKFQAHDINNQQSQLVPGFCA*HGFHQFSRHSRQHIHRDAITAPLVET 547
+FP+ A T + + + D NQ+S ++ G+ F QFS + I D + L T
Sbjct: 887 RFPTNADTYRVFTRETSLDFGNQESPIIEGYVRPQRFQQFSVGENKGIQGDQNSCYLDVT 946
Query: 548 AISNFRHKLQLYPYQV 595
S F L P V
Sbjct: 947 LYSMFSFNLTFDPLLV 962
>UniRef50_A7TCI1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 101
Score = 33.5 bits (73), Expect = 5.0
Identities = 27/87 (31%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Frame = +2
Query: 2 RHQQFPSQASTLPISGKFQAHDINNQQSQLVPGFCAQ--HGFHQFXXXXXXXXXXXXXNG 175
RH QF SQA T+ I+ H N Q + C H H G
Sbjct: 11 RHTQFASQAYTVCITAIHSLHHRNTQFASQAYTVCITGIHSLHHRNTQFASQVYIVCITG 70
Query: 176 SPS-GNRHQQFPSQASTLPISGKFQAH 253
S + H QF SQA T+ I+G H
Sbjct: 71 IHSLHHSHTQFASQAYTVCITGIHSLH 97
>UniRef50_UPI000065E9C7 Cluster: KIAA2018 (KIAA2018), mRNA; n=1;
Takifugu rubripes|Rep: KIAA2018 (KIAA2018), mRNA -
Takifugu rubripes
Length = 2068
Score = 33.1 bits (72), Expect = 6.6
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +1
Query: 430 QPTKSACPWLLRLAWLSPI*STLSPTHPPRRHNGSPSGNRHQQFPSQASTLPISGKFQAH 609
QP+ S P LL + + + S P + P H PS Q FP+Q T P + K A
Sbjct: 1904 QPSASRTPSLLPVEPQNALPS-FYPPYSPAAHPSLPSDVTLQYFPNQMFTSPSADKGSAP 1962
Query: 610 DINNQ 624
+NN+
Sbjct: 1963 PLNNR 1967
>UniRef50_Q4S555 Cluster: Chromosome 6 SCAF14737, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 6
SCAF14737, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2045
Score = 33.1 bits (72), Expect = 6.6
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +1
Query: 430 QPTKSACPWLLRLAWLSPI*STLSPTHPPRRHNGSPSGNRHQQFPSQASTLPISGKFQAH 609
QP+ S P LL + + + S P + P H PS Q FP+Q T P + K A
Sbjct: 1881 QPSASRTPSLLPVEPQNTLPS-FYPPYSPAAHPSLPSDVTLQYFPNQMFTSPSADKGSAP 1939
Query: 610 DINNQ 624
+NN+
Sbjct: 1940 PLNNR 1944
>UniRef50_A0BJI8 Cluster: Chromosome undetermined scaffold_110,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_110,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 781
Score = 33.1 bits (72), Expect = 6.6
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 120 FTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLMKILIPYS 275
FTNL T+ N+ ++ + +E +I+ K LY YQ+ ++ IPYS
Sbjct: 707 FTNLQSTIENSFNQTQMQVQKIENSINE--QKNSLYSYQLFESKPQVQIPYS 756
Score = 32.7 bits (71), Expect = 8.7
Identities = 23/94 (24%), Positives = 44/94 (46%)
Frame = +3
Query: 126 NLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLMKILIPYSSSMAFTNLVD 305
N +++ T+ + I + T + ++ Q QVNS++ + S FTNL
Sbjct: 654 NQINSQIGTVPKAVIESKEFTTLQQDLKNT-QTAIIQVNSQIENVPKAIVESKQFTNLQS 712
Query: 306 TLANTIHRDAITAPLVETAISNFRHKLQLYPYQV 407
T+ N+ ++ + +E +I+ K LY YQ+
Sbjct: 713 TIENSFNQTQMQVQKIENSIN--EQKNSLYSYQL 744
>UniRef50_UPI000023F3F3 Cluster: hypothetical protein FG08939.1; n=1;
Gibberella zeae PH-1|Rep: hypothetical protein FG08939.1
- Gibberella zeae PH-1
Length = 2643
Score = 32.7 bits (71), Expect = 8.7
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +2
Query: 347 PSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVPGFCA*HGFHQFSRHSRQHIHRDAI 526
PS + + + +T I G F+ N+QS ++P F A + H RQH +
Sbjct: 2068 PSQGKTEADKDKLTTSKILGAFKRSSKENRQSMVIPDFQAYQQHQMGAPHQRQHPQQHTT 2127
Query: 527 TAPLVETAISN 559
T E A S+
Sbjct: 2128 TQAPYEQAQSS 2138
>UniRef50_Q4A2Z4 Cluster: Putative uncharacterized protein; n=1;
Emiliania huxleyi virus 86|Rep: Putative uncharacterized
protein - Emiliania huxleyi virus 86
Length = 188
Score = 32.7 bits (71), Expect = 8.7
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 123 TNLVDTLANTIHRDAI--TAPLVETAISNFRHKLQLYPYQVNSKLMKILIPYSSSMAF-T 293
T+++D + N ++ D PLV+ I + +H +++P Q +K K + + + +F T
Sbjct: 43 TSVIDKIVNVVYTDINYNNGPLVDLDIHDIKHLSKMFPIQTIAKCSKFIYTHEAYESFHT 102
Query: 294 NL 299
N+
Sbjct: 103 NM 104
>UniRef50_Q74I10 Cluster: Putative uncharacterized protein; n=1;
Lactobacillus johnsonii|Rep: Putative uncharacterized
protein - Lactobacillus johnsonii
Length = 253
Score = 32.7 bits (71), Expect = 8.7
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +3
Query: 195 ISNFRHKLQLYPYQVNSKLMKILIPYSSSMAFTNLVDTLANTIHRDAITAPLVETA 362
ISNF + +N L + YS ++ FTNL TL NTI+ AP A
Sbjct: 109 ISNFNKYYEWNNQHINYHLYRNRAIYSPNVVFTNLDGTLINTINVITCAAPYYREA 164
>UniRef50_A6PS51 Cluster: Putative uncharacterized protein
precursor; n=1; Victivallis vadensis ATCC BAA-548|Rep:
Putative uncharacterized protein precursor - Victivallis
vadensis ATCC BAA-548
Length = 581
Score = 32.7 bits (71), Expect = 8.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 363 WRFPLGEPLWRLGGWC 316
W F LG P+W++ GWC
Sbjct: 30 WLFALGVPVWKMAGWC 45
Score = 32.7 bits (71), Expect = 8.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 195 WRFPLGEPLWRLGGWC 148
W F LG P+W++ GWC
Sbjct: 30 WLFALGVPVWKMAGWC 45
>UniRef50_A0D1A3 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 468
Score = 32.7 bits (71), Expect = 8.7
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 514 PRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 642
P++ N SP QQ Q S +PIS +Q + NQQ Q P
Sbjct: 106 PQQVNSSPMLGAFQQSIPQPSQIPISQMYQTAPVLNQQQQYKP 148
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,165,334
Number of Sequences: 1657284
Number of extensions: 13719515
Number of successful extensions: 32160
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 18692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32123
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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