Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120430.Seq
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    25   1.7  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    24   3.9  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    24   3.9  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   9.1  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/40 (27%), Positives = 15/40 (37%)
 Frame = +1

Query: 523 HNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 642
           H   P     QQ+ S     P+  K + HD      +L P
Sbjct: 314 HQHQPQQQHQQQYHSHPHHTPVQFKTELHDNTQYDEELSP 353



 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/36 (27%), Positives = 14/36 (38%)
 Frame = +2

Query: 347 PSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 454
           P     QQ+ S     P+  K + HD      +L P
Sbjct: 318 PQQQHQQQYHSHPHHTPVQFKTELHDNTQYDEELSP 353


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +1

Query: 55  PSS*HKQPTKSACPWLLRSA 114
           PSS H+QP++SA   L++SA
Sbjct: 271 PSSQHQQPSRSASIDLMQSA 290


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 17  PSQASTLPISGKFQAHDINNQQSQLVPG 100
           P  AST P  G FQ+   NN  S ++PG
Sbjct: 10  PGAASTTPSPGAFQSLARNN--SYVIPG 35



 Score = 24.2 bits (50), Expect = 3.9
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 374 PSQASTLPISGKFQAHDINNQQSQLVPG 457
           P  AST P  G FQ+   NN  S ++PG
Sbjct: 10  PGAASTTPSPGAFQSLARNN--SYVIPG 35



 Score = 24.2 bits (50), Expect = 3.9
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 562 PSQASTLPISGKFQAHDINNQQSQLVPG 645
           P  AST P  G FQ+   NN  S ++PG
Sbjct: 10  PGAASTTPSPGAFQSLARNN--SYVIPG 35


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = +3

Query: 207 RHKLQLYPYQVNSKLMKILIPYSSSMAFTNLVDTLANTIHRDAITAPLVE 356
           RH  +   Y VN  L  +L+P   S+        +  + H D + A  +E
Sbjct: 166 RHMRRFEGYPVNISLSSVLLPAGVSLDDPETQSAIKWSSHLDPLFANNIE 215


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,183
Number of Sequences: 2352
Number of extensions: 13679
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)