BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV120428.Seq (758 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY113263-1|AAM29268.1| 338|Drosophila melanogaster AT15655p pro... 33 0.32 AE014296-732|AAF47822.1| 338|Drosophila melanogaster CG1134-PA ... 33 0.32 AY118946-1|AAM50806.1| 470|Drosophila melanogaster LD31082p pro... 29 5.2 AF221066-1|AAF32365.1| 470|Drosophila melanogaster kurtz arrest... 29 5.2 AE014297-4839|AAF57212.1| 470|Drosophila melanogaster CG1487-PA... 29 5.2 AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-P... 29 9.1 AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-P... 29 9.1 >AY113263-1|AAM29268.1| 338|Drosophila melanogaster AT15655p protein. Length = 338 Score = 33.5 bits (73), Expect = 0.32 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 Query: 192 VTYLHCGHSCLCTDCDETVNVTIRV 266 + L CGH CLC DC + ++VT V Sbjct: 300 IILLPCGHVCLCEDCAQKISVTCPV 324 >AE014296-732|AAF47822.1| 338|Drosophila melanogaster CG1134-PA protein. Length = 338 Score = 33.5 bits (73), Expect = 0.32 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 Query: 192 VTYLHCGHSCLCTDCDETVNVTIRV 266 + L CGH CLC DC + ++VT V Sbjct: 300 IILLPCGHVCLCEDCAQKISVTCPV 324 >AY118946-1|AAM50806.1| 470|Drosophila melanogaster LD31082p protein. Length = 470 Score = 29.5 bits (63), Expect = 5.2 Identities = 19/61 (31%), Positives = 29/61 (47%) Frame = -3 Query: 423 WQIAHFFGMPKEDLNLKSAPATSKPTRKSPFRRATCYKVLYFNLYLMPLLHLGHVLSRLP 244 W +A + ED NL S+ + P ++ YKV L PLL+ G +++ LP Sbjct: 327 WGLALDGQLKHEDTNLASSTLITNPAQRESLGIMVHYKVKVKLLISSPLLN-GDLVAELP 385 Query: 243 F 241 F Sbjct: 386 F 386 >AF221066-1|AAF32365.1| 470|Drosophila melanogaster kurtz arrestin protein. Length = 470 Score = 29.5 bits (63), Expect = 5.2 Identities = 19/61 (31%), Positives = 29/61 (47%) Frame = -3 Query: 423 WQIAHFFGMPKEDLNLKSAPATSKPTRKSPFRRATCYKVLYFNLYLMPLLHLGHVLSRLP 244 W +A + ED NL S+ + P ++ YKV L PLL+ G +++ LP Sbjct: 327 WGLALDGQLKHEDTNLASSTLITNPAQRESLGIMVHYKVKVKLLISSPLLN-GDLVAELP 385 Query: 243 F 241 F Sbjct: 386 F 386 >AE014297-4839|AAF57212.1| 470|Drosophila melanogaster CG1487-PA protein. Length = 470 Score = 29.5 bits (63), Expect = 5.2 Identities = 19/61 (31%), Positives = 29/61 (47%) Frame = -3 Query: 423 WQIAHFFGMPKEDLNLKSAPATSKPTRKSPFRRATCYKVLYFNLYLMPLLHLGHVLSRLP 244 W +A + ED NL S+ + P ++ YKV L PLL+ G +++ LP Sbjct: 327 WGLALDGQLKHEDTNLASSTLITNPAQRESLGIMVHYKVKVKLLISSPLLN-GDLVAELP 385 Query: 243 F 241 F Sbjct: 386 F 386 >AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-PB, isoform B protein. Length = 2922 Score = 28.7 bits (61), Expect = 9.1 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +3 Query: 132 VKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDE---TVNVTIRVLN 272 + + C C S+ + V+ L C H C C C + TV +T R +N Sbjct: 2516 IAMLQQECELCMNSYPMNQMVSMLKCLHKC-CKQCAKSYFTVQITDRSIN 2564 >AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-PA, isoform A protein. Length = 2594 Score = 28.7 bits (61), Expect = 9.1 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +3 Query: 132 VKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDE---TVNVTIRVLN 272 + + C C S+ + V+ L C H C C C + TV +T R +N Sbjct: 2188 IAMLQQECELCMNSYPMNQMVSMLKCLHKC-CKQCAKSYFTVQITDRSIN 2236 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 31,851,937 Number of Sequences: 53049 Number of extensions: 638155 Number of successful extensions: 1908 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1790 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1908 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3478915869 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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