Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120427.Seq
         (752 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   6.0  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   6.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   6.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   6.0  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 224 CPDTRGFGENHTTANR 177
           CPD  GF  +HT+ ++
Sbjct: 25  CPDDFGFYPHHTSCDK 40


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 224 CPDTRGFGENHTTANR 177
           CPD  GF  +HT+ ++
Sbjct: 25  CPDDFGFYPHHTSCDK 40


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +1

Query: 13  DRCNGATRQTVARNYRS*RRF*SESNAQSQL 105
           D C  A++QT++  Y+   +F + S  +++L
Sbjct: 299 DACTIASKQTISWCYKLQEQFVTNSEVRTEL 329


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +1

Query: 13  DRCNGATRQTVARNYRS*RRF*SESNAQSQL 105
           D C  A++QT++  Y+   +F + S  +++L
Sbjct: 299 DACTIASKQTISWCYKLQEQFVTNSEVRTEL 329


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,095
Number of Sequences: 336
Number of extensions: 3587
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)