Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120427.Seq
         (752 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL359257-2|CAI39759.1| 4640|Homo sapiens AC001226.5 protein.           32   2.5  
AL159158-1|CAI16842.1| 4640|Homo sapiens AC001226.5 protein.           32   2.5  
AL159154-1|CAH73736.1| 4640|Homo sapiens AC001226.5 protein.           32   2.5  
AF075587-1|AAC39928.1| 4641|Homo sapiens protein associated with...    32   2.5  
AK026700-1|BAB15531.1|  132|Homo sapiens protein ( Homo sapiens ...    30   7.8  

>AL359257-2|CAI39759.1| 4640|Homo sapiens AC001226.5 protein.
          Length = 4640

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 287 SMTTPISLFKCRRSCCMLCRVCPDTRGFGENHTTANR 177
           SM  P  + K +   CM+C VC D  G+G +  ++ R
Sbjct: 713 SMMCPPGMHKWKLEQCMVCTVCGDCTGYGASCVSSGR 749


>AL159158-1|CAI16842.1| 4640|Homo sapiens AC001226.5 protein.
          Length = 4640

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 287 SMTTPISLFKCRRSCCMLCRVCPDTRGFGENHTTANR 177
           SM  P  + K +   CM+C VC D  G+G +  ++ R
Sbjct: 713 SMMCPPGMHKWKLEQCMVCTVCGDCTGYGASCVSSGR 749


>AL159154-1|CAH73736.1| 4640|Homo sapiens AC001226.5 protein.
          Length = 4640

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 287 SMTTPISLFKCRRSCCMLCRVCPDTRGFGENHTTANR 177
           SM  P  + K +   CM+C VC D  G+G +  ++ R
Sbjct: 713 SMMCPPGMHKWKLEQCMVCTVCGDCTGYGASCVSSGR 749


>AF075587-1|AAC39928.1| 4641|Homo sapiens protein associated with
           Myc protein.
          Length = 4641

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 287 SMTTPISLFKCRRSCCMLCRVCPDTRGFGENHTTANR 177
           SM  P  + K +   CM+C VC D  G+G +  ++ R
Sbjct: 713 SMMCPPGMHKWKLEQCMVCTVCGDCTGYGASCVSSGR 749


>AK026700-1|BAB15531.1|  132|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23047 fis, clone LNG02513. ).
          Length = 132

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 22/68 (32%), Positives = 32/68 (47%)
 Frame = +1

Query: 232 HSMQQLRRHLNSDMGVVMLVEEYFYCLSSCNFKQDAKLALQTLTNFESLSDLMASYNFST 411
           +S+  +R    SD+G V   EE+     S N +QD  L  Q LT+ + L D     NF T
Sbjct: 3   NSIDTVRYGKESDLGDVS--EEHGENKESSNNEQDNSLLEQYLTSVQQLEDADERTNFDT 60

Query: 412 PDLDTNAY 435
              D+  +
Sbjct: 61  ETRDSKLH 68


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,873,957
Number of Sequences: 237096
Number of extensions: 1917785
Number of successful extensions: 7573
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7573
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)