Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120427.Seq
         (752 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p...    31   0.88 
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p...    31   0.88 
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr...    31   0.88 
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr...    31   0.88 
AL033514-6|CAA22096.2|  373|Caenorhabditis elegans Hypothetical ...    29   4.7  

>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
           protein R11A8.7b protein.
          Length = 2584

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
 Frame = +1

Query: 244 QLRRHLNS--DMGVVMLVEEYFYCLSSCNFKQDAKLALQTLT---NFESLSDLM---ASY 399
           QL R L S  D G +++VEE     +  NF+QD + AL       +FE +  L+   AS 
Sbjct: 554 QLSRALVSAADFGSLLIVEEVIRAGADLNFEQDERTALMKAAKGDHFEVVQLLLSKGASV 613

Query: 400 NFSTPDLDTNAYELMDFE*N 459
           NF +   D  A  L   E N
Sbjct: 614 NFKSSKNDATALSLACSEGN 633


>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
           protein R11A8.7a protein.
          Length = 2606

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
 Frame = +1

Query: 244 QLRRHLNS--DMGVVMLVEEYFYCLSSCNFKQDAKLALQTLT---NFESLSDLM---ASY 399
           QL R L S  D G +++VEE     +  NF+QD + AL       +FE +  L+   AS 
Sbjct: 554 QLSRALVSAADFGSLLIVEEVIRAGADLNFEQDERTALMKAAKGDHFEVVQLLLSKGASV 613

Query: 400 NFSTPDLDTNAYELMDFE*N 459
           NF +   D  A  L   E N
Sbjct: 614 NFKSSKNDATALSLACSEGN 633


>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical
           protein R11A8.7b protein.
          Length = 2584

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
 Frame = +1

Query: 244 QLRRHLNS--DMGVVMLVEEYFYCLSSCNFKQDAKLALQTLT---NFESLSDLM---ASY 399
           QL R L S  D G +++VEE     +  NF+QD + AL       +FE +  L+   AS 
Sbjct: 554 QLSRALVSAADFGSLLIVEEVIRAGADLNFEQDERTALMKAAKGDHFEVVQLLLSKGASV 613

Query: 400 NFSTPDLDTNAYELMDFE*N 459
           NF +   D  A  L   E N
Sbjct: 614 NFKSSKNDATALSLACSEGN 633


>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical
           protein R11A8.7a protein.
          Length = 2606

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
 Frame = +1

Query: 244 QLRRHLNS--DMGVVMLVEEYFYCLSSCNFKQDAKLALQTLT---NFESLSDLM---ASY 399
           QL R L S  D G +++VEE     +  NF+QD + AL       +FE +  L+   AS 
Sbjct: 554 QLSRALVSAADFGSLLIVEEVIRAGADLNFEQDERTALMKAAKGDHFEVVQLLLSKGASV 613

Query: 400 NFSTPDLDTNAYELMDFE*N 459
           NF +   D  A  L   E N
Sbjct: 614 NFKSSKNDATALSLACSEGN 633


>AL033514-6|CAA22096.2|  373|Caenorhabditis elegans Hypothetical
           protein Y75B8A.6 protein.
          Length = 373

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
 Frame = -1

Query: 257 CRRSCCMLCRVCPDTRGFGENH---TTANRRACNKVDS 153
           CR   C +C VC D R F   H       ++ CN   S
Sbjct: 152 CRMQDCQICLVCLDKRFFENRHIPGAMCAKKRCNNAQS 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,527,334
Number of Sequences: 27780
Number of extensions: 343535
Number of successful extensions: 730
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)