Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120426.Seq
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK096721-1|BAC04850.1|  180|Homo sapiens protein ( Homo sapiens ...    31   5.2  

>AK096721-1|BAC04850.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39402 fis, clone PLACE6011975. ).
          Length = 180

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
 Frame = +3

Query: 360 WISNFCRRKASFGCDDVSSCWRKRMAATGDGNSR-----SVSAVGTHKGA-ERRPCEKLR 521
           WIS     + + G       W++  +  G G +R     +V+A G   GA   RPC  LR
Sbjct: 6   WISKVSAGRPACGRQAGREGWQESRSRAGCGRARGPDREAVAARGDSLGAGPGRPCPALR 65

Query: 522 PNMSVYG 542
             ++VYG
Sbjct: 66  GRLAVYG 72


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,043,569
Number of Sequences: 237096
Number of extensions: 2157441
Number of successful extensions: 4851
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4851
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)