Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120424.Seq
         (684 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0D844 Cluster: Chromosome undetermined scaffold_40, wh...    33   4.9  
UniRef50_Q8IM62 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  
UniRef50_Q03628 Cluster: Asparagine-rich antigen Pfa35-2; n=3; E...    33   8.6  

>UniRef50_A0D844 Cluster: Chromosome undetermined scaffold_40, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_40,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 355

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 13/41 (31%), Positives = 26/41 (63%)
 Frame = +3

Query: 63  NGFYGTLRFKLKTILVFSFIRSYIHTVFYFNIRYFQLYIIL 185
           NGF+    F +K+I +F F+ ++++ +  FN+R  +  +IL
Sbjct: 273 NGFFQVQNFIMKSIELFYFMPAFLYFIIVFNVRDVERIVIL 313


>UniRef50_Q8IM62 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 2456

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -3

Query: 613  YNNNVFDTNEIVIPSNYKSVPKNSCKWR---YYYKE 515
            +   ++D   I+I  NYK++ KN CK     YYYK+
Sbjct: 2406 HTKKIYDHINIIINQNYKTLHKNKCKMNNSFYYYKK 2441


>UniRef50_Q03628 Cluster: Asparagine-rich antigen Pfa35-2; n=3;
           Eukaryota|Rep: Asparagine-rich antigen Pfa35-2 -
           Plasmodium falciparum
          Length = 407

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 637 SRSSAGFYYNNNVFDTNEIVIPSNYKSVPKNSCKWRYY 524
           + SS  +Y+NNN  + + + I  NY++  KN+C   YY
Sbjct: 26  NNSSNNYYHNNNYHNNHRVNIHMNYRN--KNNCMNNYY 61


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,211,527
Number of Sequences: 1657284
Number of extensions: 8920638
Number of successful extensions: 19106
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19101
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)