Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120418.Seq
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    24   5.3  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   5.3  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   7.0  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   7.0  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    23   7.0  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    23   9.2  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 495 MSALPSLRSKFAKRWI 542
           M  LPS R  FA RW+
Sbjct: 1   MGRLPSFRRSFADRWM 16


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/18 (55%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = -1

Query: 231  PPGSVLEP-DHAGVLNGD 181
            PPGS+L+P D A V+ G+
Sbjct: 1092 PPGSILDPSDGAAVVGGN 1109


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 252 VPPQSNSPPGSVLEPD 205
           +PP SNS P S   PD
Sbjct: 868 MPPSSNSSPSSYPSPD 883


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 692 SAECMNQNVRNCGSSRTE 639
           S +C NQ + N GSS T+
Sbjct: 79  SNKCSNQQLANTGSSNTQ 96


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -1

Query: 261 FDNVPPQ-SNSPPGSVLEPDHAGVL 190
           + NV  Q SN P G + EPD  G L
Sbjct: 136 YSNVSRQISNEPWGELTEPDTVGYL 160


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 30  DRFARSSLKNHYFHCFITYSVGRKRC 107
           DRFA ++    + H F+ +  G + C
Sbjct: 425 DRFALAATHARHTHAFLPFGDGPRNC 450


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,503
Number of Sequences: 2352
Number of extensions: 15983
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)