Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120417.Seq
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   2.0  
AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding pr...    25   2.7  
AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.        24   4.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   4.6  
AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.        24   4.6  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   4.6  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   6.1  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +2

Query: 71   RDAETARQDCENARRETAQL 130
            RDA++  + CE A+R TAQL
Sbjct: 1051 RDADSWSRICEGAKRITAQL 1070


>AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP24 protein.
          Length = 176

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 5   NADLAEANRSLILFANEMIVARRDAETARQDCENAR 112
           NAD  +   SL +F + +  AR +AE  R+  +NAR
Sbjct: 26  NADNFKLYSSLFVFPSPLQGARLEAEHVRRIHQNAR 61


>AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 265 RSLKRLGSNDVIFSSDYVPNS 327
           R LK+LGSN + F+ +  PN+
Sbjct: 103 RLLKKLGSNAIPFTFNISPNA 123


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 128 LANRMADIAQDVIAKPSNPQ 187
           L NR+ DI+++  A PS+P+
Sbjct: 408 LYNRLRDISEETSALPSHPR 427


>AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 265 RSLKRLGSNDVIFSSDYVPNS 327
           R LK+LGSN + F+ +  PN+
Sbjct: 103 RLLKKLGSNAIPFTFNISPNA 123


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 71   RDAETARQDCENARRETAQLANRMAD 148
            RDAE+  + CE A+R TA L     D
Sbjct: 988  RDAESWSRICEAAKRITASLQQAWDD 1013


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +1

Query: 502  KFYMSSSV*ALGDQQSAFVMHNIYCFLI 585
            +F+M+++  A+GD Q   +    Y F++
Sbjct: 2971 RFFMAANAKAIGDLQRGIIPIAFYTFIV 2998


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,716
Number of Sequences: 2352
Number of extensions: 11736
Number of successful extensions: 36
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)