Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120417.Seq
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr...    29   2.1  
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch...    29   2.1  
AF026215-4|AAB71322.1|  843|Caenorhabditis elegans Hypothetical ...    28   4.9  
Z37139-3|CAA85492.2|  793|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z81056-2|CAB02901.2|  323|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
            T18D3.4 protein.
          Length = 1947

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = +2

Query: 8    ADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMADIAQDV 163
            A +  ANR  + F+NE+  A+R AE   ++ +N    +  LA  +  + + +
Sbjct: 1312 AKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQLKESI 1363


>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
            T18D3.4 protein.
          Length = 1947

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = +2

Query: 8    ADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMADIAQDV 163
            A +  ANR  + F+NE+  A+R AE   ++ +N    +  LA  +  + + +
Sbjct: 1312 AKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQLKESI 1363


>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
            protein.
          Length = 1947

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = +2

Query: 8    ADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMADIAQDV 163
            A +  ANR  + F+NE+  A+R AE   ++ +N    +  LA  +  + + +
Sbjct: 1312 AKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQLKESI 1363


>AF026215-4|AAB71322.1|  843|Caenorhabditis elegans Hypothetical
           protein F09G2.4 protein.
          Length = 843

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 20/41 (48%), Positives = 22/41 (53%)
 Frame = +2

Query: 65  ARRDAETARQDCENARRETAQLANRMADIAQDVIAKPSNPQ 187
           A RDAE  R   E ARR+ AQ AN   D   D IA P  P+
Sbjct: 410 AERDAEETRLRMERARRQ-AQ-ANESDDSDDDDIAAPIVPR 448


>Z37139-3|CAA85492.2|  793|Caenorhabditis elegans Hypothetical
           protein C14B1.6 protein.
          Length = 793

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 367 NKFKAKHNRITLLEDYTREELMNVIGSTMTDRQIARMNSLR 489
           N  + +     LL  YT EEL+ V G  + D QIA    +R
Sbjct: 523 NYDQKRRQNFGLLRYYTLEELIEVFGLLLPDVQIAMRRGVR 563


>Z81056-2|CAB02901.2|  323|Caenorhabditis elegans Hypothetical
           protein F09F3.2 protein.
          Length = 323

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 180 LLGLAITSCAMSAMRLASCAVSRRAFSQSCRAV 82
           L+G+ IT+CA+SA+   + A+S  +    C  +
Sbjct: 131 LIGIPITTCAISAVLFITLAISVLSLIAGCSCI 163


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,501,617
Number of Sequences: 27780
Number of extensions: 254769
Number of successful extensions: 737
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)