Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120416X.Seq
(536 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 29 0.33
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 29 0.33
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 29 0.33
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 29 0.33
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 29 0.33
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 29 0.33
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 29 0.33
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 29 0.33
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 29 0.33
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 29 0.33
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 29 0.33
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 29 0.33
SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces p... 27 1.3
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 27 1.8
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 27 1.8
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 27 2.3
SPAC4F10.02 |||aminopeptidase |Schizosaccharomyces pombe|chr 1||... 26 3.1
SPBC577.14c |spa1|spa|ornithine decarboxylase antizyme Spa1|Schi... 26 4.1
SPAC806.08c |mod21||gamma tubulin complex subunit Mod21|Schizosa... 25 5.4
SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl modifica... 25 7.2
SPAC23C4.16c |atg15||triacylglycerol lipase Atg15 |Schizosacchar... 25 7.2
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 25 9.5
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.33
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = -2
Query: 217 FIERIIAIKD--KQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMM-HKKDELLQVKDT 47
F+ +I D Q+ + T+++ LN +E +Q KD ++ + KD++L DT
Sbjct: 850 FVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDT 909
Query: 46 QVSNLIAK 23
Q++ I K
Sbjct: 910 QLTRTIIK 917
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.33
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = -2
Query: 217 FIERIIAIKD--KQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMM-HKKDELLQVKDT 47
F+ +I D Q+ + T+++ LN +E +Q KD ++ + KD++L DT
Sbjct: 850 FVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDT 909
Query: 46 QVSNLIAK 23
Q++ I K
Sbjct: 910 QLTRTIIK 917
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.33
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = -2
Query: 217 FIERIIAIKD--KQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMM-HKKDELLQVKDT 47
F+ +I D Q+ + T+++ LN +E +Q KD ++ + KD++L DT
Sbjct: 850 FVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDT 909
Query: 46 QVSNLIAK 23
Q++ I K
Sbjct: 910 QLTRTIIK 917
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.33
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = -2
Query: 217 FIERIIAIKD--KQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMM-HKKDELLQVKDT 47
F+ +I D Q+ + T+++ LN +E +Q KD ++ + KD++L DT
Sbjct: 850 FVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDT 909
Query: 46 QVSNLIAK 23
Q++ I K
Sbjct: 910 QLTRTIIK 917
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.33
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = -2
Query: 217 FIERIIAIKD--KQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMM-HKKDELLQVKDT 47
F+ +I D Q+ + T+++ LN +E +Q KD ++ + KD++L DT
Sbjct: 850 FVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDT 909
Query: 46 QVSNLIAK 23
Q++ I K
Sbjct: 910 QLTRTIIK 917
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 29.5 bits (63), Expect = 0.33
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -2
Query: 193 KDKQIEAKDLQ-VTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQVSNLIAK 23
++ Q ++D Q +T+ TD+ Q+ + DE KK ELL+ K+ + K
Sbjct: 274 RNHQFHSRDSQPITQRHTDIESRLQKMQDNAKELDESRRKKIELLEKKERDEEQFLEK 331
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.33
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = -2
Query: 217 FIERIIAIKD--KQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMM-HKKDELLQVKDT 47
F+ +I D Q+ + T+++ LN +E +Q KD ++ + KD++L DT
Sbjct: 850 FVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDT 909
Query: 46 QVSNLIAK 23
Q++ I K
Sbjct: 910 QLTRTIIK 917
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.33
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = -2
Query: 217 FIERIIAIKD--KQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMM-HKKDELLQVKDT 47
F+ +I D Q+ + T+++ LN +E +Q KD ++ + KD++L DT
Sbjct: 850 FVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDT 909
Query: 46 QVSNLIAK 23
Q++ I K
Sbjct: 910 QLTRTIIK 917
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.33
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = -2
Query: 217 FIERIIAIKD--KQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMM-HKKDELLQVKDT 47
F+ +I D Q+ + T+++ LN +E +Q KD ++ + KD++L DT
Sbjct: 850 FVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDT 909
Query: 46 QVSNLIAK 23
Q++ I K
Sbjct: 910 QLTRTIIK 917
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.33
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = -2
Query: 217 FIERIIAIKD--KQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMM-HKKDELLQVKDT 47
F+ +I D Q+ + T+++ LN +E +Q KD ++ + KD++L DT
Sbjct: 850 FVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDT 909
Query: 46 QVSNLIAK 23
Q++ I K
Sbjct: 910 QLTRTIIK 917
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.33
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = -2
Query: 217 FIERIIAIKD--KQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMM-HKKDELLQVKDT 47
F+ +I D Q+ + T+++ LN +E +Q KD ++ + KD++L DT
Sbjct: 850 FVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDT 909
Query: 46 QVSNLIAK 23
Q++ I K
Sbjct: 910 QLTRTIIK 917
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.33
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = -2
Query: 217 FIERIIAIKD--KQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMM-HKKDELLQVKDT 47
F+ +I D Q+ + T+++ LN +E +Q KD ++ + KD++L DT
Sbjct: 850 FVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDT 909
Query: 46 QVSNLIAK 23
Q++ I K
Sbjct: 910 QLTRTIIK 917
>SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 728
Score = 27.5 bits (58), Expect = 1.3
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = -3
Query: 471 LITKSGVIQLIMKSKLPYAIELQEWLL 391
L+ K GV+ L+ K KLP+++ ++ ++
Sbjct: 542 LLVKDGVVHLVDKVKLPFSVSQKDMII 568
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 339 KQQEEKNKQLVTKLIATFTEHTNALQAVGRKKPRNFLKSKSLSN 208
K+ EE NK+L ++ + H N VGR K F +S + N
Sbjct: 702 KEWEEDNKKLTLNIVNSVIPHDNLNFQVGRSK--IFFRSNVIGN 743
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 27.1 bits (57), Expect = 1.8
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 21 ILAIKLETCVSLTCNNSSFL-CIISSFLCIVS*NPVYMRLRSVITRVTCKSLASICLSLI 197
I I+LE V+ C N + + C S+ CIV R + I+R TC + + +++
Sbjct: 93 IKTIELEATVNCLCVNENLVVCGCSNSSCIVYSWNAEQRNLTEISRFTCSEIIPLEFAIV 152
Query: 198 AMMRSI 215
+ I
Sbjct: 153 KLDHGI 158
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 26.6 bits (56), Expect = 2.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 297 IATFTEHTNALQAVGRKKPRNFLKSKSLSNA 205
I TFT+HT+A+ + K N L S SL +
Sbjct: 374 IVTFTQHTSAVSGLCFSKRGNVLFSSSLDGS 404
>SPAC4F10.02 |||aminopeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 467
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 247 FAPHRLQRVCVLGKCRNQFSHQLFVLFLL 333
F P LQR+C LGK + FS + FL+
Sbjct: 306 FLPAVLQRICELGKESSLFSISMVKSFLV 334
>SPBC577.14c |spa1|spa|ornithine decarboxylase antizyme
Spa1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 226
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 432 SKLPYAIELQEWLLEEVIPHVLCT 361
S LPY ++ W+ E +PH+ C+
Sbjct: 194 SSLPYLVKSLHWVGFEPLPHLNCS 217
>SPAC806.08c |mod21||gamma tubulin complex subunit
Mod21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 618
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 360 GKYDPAIKQQEEKNKQLVTKLIATF 286
G+++ IKQQEE K L +K + F
Sbjct: 442 GEFENLIKQQEEAKKSLWSKRFSRF 466
>SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl
modification enzyme|Schizosaccharomyces pombe|chr
2|||Manual
Length = 666
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 390 EEVIPHVLCTGKYDPAIKQQEEKNKQL 310
+ V+ ++ GKY IK+Q +NKQL
Sbjct: 551 KRVLQRLIIEGKYTYYIKRQGTQNKQL 577
>SPAC23C4.16c |atg15||triacylglycerol lipase Atg15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 470 STVCGCKYSGSPCLPRCLE 526
STVCGC + C CLE
Sbjct: 230 STVCGCYKNTYTCSQTCLE 248
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 24.6 bits (51), Expect = 9.5
Identities = 16/90 (17%), Positives = 40/90 (44%)
Frame = -2
Query: 301 TDCDIYRAHKRAASGGAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYT 122
T+ ++ ++AAS K+ E+ +A + + +KD ++ + +L
Sbjct: 561 TERELRLLQEKAASLERNKSSEVSNLLSRYNTEVAHLEDALHSKDRELANLGVELKSTEN 620
Query: 121 GFQETMQRKDEMMHKKDELLQVKDTQVSNL 32
+++ +Q K+E + + + Q+S L
Sbjct: 621 RYRQLLQEKEEELEIQKAAVDESLLQLSKL 650
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,082,817
Number of Sequences: 5004
Number of extensions: 39030
Number of successful extensions: 158
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 222442660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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