Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120416X.Seq
(536 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50638| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00033) 33 0.20
SB_58057| Best HMM Match : RVT_1 (HMM E-Value=0.0085) 32 0.34
SB_27299| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.45
SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_16983| Best HMM Match : SNARE (HMM E-Value=1.9) 29 1.8
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 29 2.4
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 29 2.4
SB_3323| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_40387| Best HMM Match : GrpE (HMM E-Value=0) 29 3.2
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 28 4.2
SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06) 28 5.6
SB_11202| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_3314| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_27117| Best HMM Match : SAM_1 (HMM E-Value=6.3e-07) 27 7.3
SB_25665| Best HMM Match : TolA (HMM E-Value=1.7) 27 7.3
SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24) 27 7.3
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_40271| Best HMM Match : TPR_2 (HMM E-Value=4.6e-24) 27 9.7
SB_27468| Best HMM Match : Peptidase_C48 (HMM E-Value=0.0026) 27 9.7
>SB_50638| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00033)
Length = 311
Score = 32.7 bits (71), Expect = 0.20
Identities = 21/93 (22%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = -2
Query: 292 DIYRAHKRAASGGAQKTEELFKKQEFIERIIAIKDKQIEAKDL--QVTRVMTDLNRMYTG 119
D + ++A Q+ E+ ++ +ER ++++ Q + KDL Q R +L ++
Sbjct: 69 DACKEKEKAKKQMEQRMAEIGVEKGNVER--SLEEVQSQNKDLMQQAERAKAELAKLSAK 126
Query: 118 FQETMQRKDEMMHKKDELLQVKDTQVSNLIAKM 20
++E KDEM + ++ K ++ +L A +
Sbjct: 127 YEELEDEKDEMQESLSDTIREKSREIRDLEADL 159
>SB_58057| Best HMM Match : RVT_1 (HMM E-Value=0.0085)
Length = 576
Score = 31.9 bits (69), Expect = 0.34
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -3
Query: 432 SKLPYAIELQEWLLEEVIPHVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVG 253
+KLP + + LE V+ C G Y + +EK ++ L +T+ + T A V
Sbjct: 165 TKLPVGNPGKNFTLEAVVKIADCFGSYTTQVMATQEKCQEQNVDLYSTYVDLTKAFDTVS 224
Query: 252 RK 247
R+
Sbjct: 225 RE 226
>SB_27299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 31.5 bits (68), Expect = 0.45
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = -2
Query: 298 DCDIYRAHKRAASGGAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTG 119
D + Y + + TE+ F+K +FIE+ I IKD++ ++VTR +N +
Sbjct: 75 DIEFYFEKENQNNPNEYLTEKGFEKYKFIEKRIKIKDEKDSVYQIKVTRHGPVMNTIIQH 134
Query: 118 FQETMQRKDEMMHKK--DELLQV 56
++ + ++ K +ELL++
Sbjct: 135 LKDEKPMAMQWIYTKLNNELLEL 157
>SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = -2
Query: 187 KQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQVSNLIAK 23
K I AK + T +++L M+T + +Q+ E +KD Q+K+ ++ +A+
Sbjct: 321 KTITAKLTEATNRVSELQNMFTSMETQLQKSQERQVEKDN--QIKELELKLKLAQ 373
>SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 41 DLRVFNLQQLVFFVHHFIFSLHSFLKPGV--HAVEVGHHARHLQVFGLNLLVLN 196
DL + ++Q +F HHF+F H L+ A E A L+ NL++LN
Sbjct: 638 DLDIPEVKQAIFATHHFVFQAHIVLEGAAIKLASEPCARAHGLKFDECNLVLLN 691
>SB_16983| Best HMM Match : SNARE (HMM E-Value=1.9)
Length = 101
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = -2
Query: 163 QVTRVMTDLNRMYTGFQETMQRKDEMMHKKDEL---LQVKDTQVSNL 32
Q+ R +TDLN + +QE ++ + ++ +K D+ L+VK +V L
Sbjct: 14 QLQRTITDLNDLTLRYQEVLKERRDLENKLDQAESDLEVKHKRVEEL 60
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = -2
Query: 112 ETMQRKDEMMHKKDELLQVKDTQVSNLIAKMIDLSD 5
E+ ++ DE+M +KD+LL+ K V++L KM +++D
Sbjct: 1618 ESEKKIDELMVQKDKLLKEKVDLVNSLHEKMSEMND 1653
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 29.1 bits (62), Expect = 2.4
Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = -2
Query: 295 CDIYRAHKRAASGGAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGF 116
C++ A + + G A+ E K +E + I +K+K E++ + R DL +
Sbjct: 387 CELDNAQRNKSIGSAELGGERSKVKELVHEIAELKEKLQESEKVIELR-KKDLGKKDKTI 445
Query: 115 QETMQR----KDEMMHKKDELLQVKDTQVSNLIAKMIDLSD 5
+E +R + + K DE+ + + +++ L AK L D
Sbjct: 446 EELKERIIVLEKSLKDKNDEIFGI-EGKIAELEAKNDRLHD 485
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 348 PAIKQQEEK-NKQLVTKLIATFTEHTNALQAVGRKKPRNFLKSKSLSNASSQLRT 187
PAI+ +EK K L T+L+ L+ GRKKP K SLS + ++ T
Sbjct: 1078 PAIRTLQEKIGKDLATELLEMDENSAEELKR-GRKKPFALWKMASLSKSLEEIVT 1131
>SB_3323| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 872
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/82 (20%), Positives = 42/82 (51%)
Frame = -2
Query: 277 HKRAASGGAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQR 98
+KR+ S ++ E++ IE I++ KQI + + T+ YT + T+ +
Sbjct: 241 YKRSISKAQEQNEQITLMHNKIEADISMVKKQISISRTKQEALKTE----YTTYTRTLHQ 296
Query: 97 KDEMMHKKDELLQVKDTQVSNL 32
++ +++ + +KD++++ L
Sbjct: 297 TEQSLNRAQTEVVLKDSELTAL 318
>SB_40387| Best HMM Match : GrpE (HMM E-Value=0)
Length = 328
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 214 IERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHK 77
+E +A KDK IE +D VT + R Q +QR +M+ +
Sbjct: 164 LEAKLAKKDKYIEERDKLVTELEDKYKRSLAENQNVLQRSQKMVEE 209
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/63 (17%), Positives = 36/63 (57%)
Frame = -2
Query: 241 EELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELL 62
+++ K+Q +E+++ K+K+ + + + ++ L +E +QR+ E + + +++
Sbjct: 970 KKIMKEQRELEKMLQQKEKERQVERQKQKQLQEQLQEQEKALRERLQRQQEELEEIEKVK 1029
Query: 61 QVK 53
Q++
Sbjct: 1030 QLE 1032
>SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 78 LCIISSFLCIVS*NPVYMRLRSVIT 152
L ++ SFLCI+ +P Y+ LR++ T
Sbjct: 40 LAVVYSFLCIIIVSPNYLTLRALYT 64
>SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06)
Length = 1691
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -3
Query: 342 IKQQEEKNKQLVTKLIATFTEHTNALQAVGRKKPRNFLKSKSLSNASSQLRT 187
+K+ +EKN+QL T+ +E N+ + K R K++ L+ S +L T
Sbjct: 402 VKKLDEKNQQLATRNAELMSELENSNKEHRDKNKRLEKKNQELTQNSRKLET 453
>SB_11202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -3
Query: 444 LIMKSKLPYAIE-LQEWLLEEVIPHVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHTNA 268
L+ S+ +A+E +QE+ + IPH++ + DP + + K +TK + +E +
Sbjct: 1677 LLYDSRGLHALEDVQEYCRDTGIPHLVFLKEQDPGVAKVVSIEKDKLTKTSVSTSELVDH 1736
Query: 267 LQ 262
LQ
Sbjct: 1737 LQ 1738
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = -2
Query: 226 KQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDT 47
K E IE + K+IE+++ ++ ++ D+ ++MQ++DE+ D+ L V
Sbjct: 913 KDELIENL----KKEIESQEKEIKKLRRDVLSAQNSLDQSMQKRDEL----DKALFVAKQ 964
Query: 46 QVSN 35
Q+S+
Sbjct: 965 QLSD 968
>SB_3314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 663
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 351 DPAIKQQEEKNKQLVTKLIATFTEHTNALQAVG 253
D A K Q+EK + ++KLI F E ++ A G
Sbjct: 121 DEATKAQQEKTRVFLSKLIHKFLEILKSIPATG 153
>SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -3
Query: 345 AIKQQEEKNKQLVTKLIATFTEHTNALQAVGRKKPRNFLKSKSLSNASSQLRTSRLRPKT 166
A+ ++ N+++V K + FT++++ V L +L+ S +RTS + P T
Sbjct: 347 ALWRRGMSNEEVVQKAVNMFTQNSSHSICVDSLVQDKLLPYMALAKGQSSIRTSLITPHT 406
>SB_27117| Best HMM Match : SAM_1 (HMM E-Value=6.3e-07)
Length = 367
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = -3
Query: 510 KQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPHV--LCTGKYDPAIK 337
+QG Y + ++ T + + I P +++EW + +V H+ + GKY A K
Sbjct: 264 EQGSDNYFEVKSLPGTNADRVNDISIPTPPNPSQMEEWTVNDVANHLVHIKLGKYAEAFK 323
Query: 336 QQE 328
Q++
Sbjct: 324 QKQ 326
>SB_25665| Best HMM Match : TolA (HMM E-Value=1.7)
Length = 697
Score = 27.5 bits (58), Expect = 7.3
Identities = 21/83 (25%), Positives = 41/83 (49%)
Frame = -2
Query: 250 QKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKD 71
Q E+L+KK F+E I +K +Q + +D+Q ++ ++ + + + + K
Sbjct: 15 QLHEQLYKKHAFLETAI-VKQRQ-QLQDIQQQMLLNLQAQLTLDPAKNKELFETQLKKTR 72
Query: 70 ELLQVKDTQVSNLIAKMIDLSDR 2
EL + + QVS + L+DR
Sbjct: 73 ELTEKHEKQVSTQKQFVRKLADR 95
>SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24)
Length = 565
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -3
Query: 345 AIKQQEEKNKQLVTKLIATFTEHTNALQAVGRKKPRNFLKSKSLSNASSQLRTSRLRPKT 166
A+ ++ N+++V K + FT++++ V L +L+ S +RTS + P T
Sbjct: 494 ALWRRGMSNEEVVQKAVNMFTQNSSHSICVDSLVQDKLLPYMALAKGQSSIRTSLITPHT 553
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 417 AIELQEWLLEEVIPHVLCTGKYDPAI 340
AI + +W L+ VIP LCT K + I
Sbjct: 420 AIPVDQWNLDYVIPKPLCTTKNNKCI 445
>SB_40271| Best HMM Match : TPR_2 (HMM E-Value=4.6e-24)
Length = 1329
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 235 LFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQET 107
L K ++ +E + IK+K A+ V + DL +YT ET
Sbjct: 1138 LEKAKKVLEHSLEIKEKVFNAEHFIVGEALNDLGVVYTRLGET 1180
>SB_27468| Best HMM Match : Peptidase_C48 (HMM E-Value=0.0026)
Length = 766
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 104 HSFLKPGVHAVEVGHHARHLQ 166
HS L+PGV AV + +HLQ
Sbjct: 143 HSCLRPGVSAVVLSQREKHLQ 163
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,309,999
Number of Sequences: 59808
Number of extensions: 320483
Number of successful extensions: 924
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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