Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120416X.Seq
(536 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC028423-1|AAH28423.1| 1022|Homo sapiens PMFBP1 protein protein. 34 0.28
AK093285-1|BAC04121.1| 797|Homo sapiens protein ( Homo sapiens ... 34 0.28
BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with ... 32 1.1
BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with ... 32 1.1
AL834464-1|CAD39123.1| 236|Homo sapiens hypothetical protein pr... 32 1.1
AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein. 32 1.1
AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein. 32 1.1
U51587-1|AAB81549.1| 767|Homo sapiens Golgi complex autoantigen... 32 1.5
BC032853-1|AAH32853.1| 767|Homo sapiens golgi autoantigen, golg... 32 1.5
AB208858-1|BAD92095.1| 400|Homo sapiens golgin 97 variant protein. 32 1.5
Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein. 31 2.0
AL451125-2|CAI14346.1| 767|Homo sapiens golgi autoantigen, golg... 31 2.0
AL354928-1|CAI39632.1| 767|Homo sapiens golgi autoantigen, golg... 31 2.0
AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein p... 31 2.0
BC146789-1|AAI46790.1| 1583|Homo sapiens GRIP and coiled-coil do... 30 4.5
AY531265-1|AAT00461.1| 142|Homo sapiens biogenesis of lysosome-... 30 4.5
AF273042-1|AAG34902.1| 685|Homo sapiens CTCL tumor antigen se1-... 30 4.5
AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein. 30 4.5
AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein. 30 4.5
BC039121-1|AAH39121.1| 510|Homo sapiens SYNE1 protein protein. 30 6.0
AL357081-3|CAI41324.1| 675|Homo sapiens RP11-809I23.2 protein. 30 6.0
AL354928-10|CAI39642.1| 82|Homo sapiens golgi autoantigen, gol... 30 6.0
AL049548-6|CAI42747.1| 675|Homo sapiens RP11-809I23.2 protein. 30 6.0
AK056122-1|BAB71097.1| 560|Homo sapiens protein ( Homo sapiens ... 30 6.0
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 30 6.0
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 30 6.0
>BC028423-1|AAH28423.1| 1022|Homo sapiens PMFBP1 protein protein.
Length = 1022
Score = 34.3 bits (75), Expect = 0.28
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = -2
Query: 181 IEAKDLQVTRVMTDLNRMYTGFQETMQ---RKDEMMHKKDELLQ---VKDTQVSNLIAK 23
IE KD +T + L + F ET + +KD+ + +KDE+LQ K TQV N + K
Sbjct: 368 IERKDKDITILQCRLQELQLEFTETQKLTLKKDKFLQEKDEMLQELEKKLTQVQNSLLK 426
>AK093285-1|BAC04121.1| 797|Homo sapiens protein ( Homo sapiens
cDNA FLJ35966 fis, clone TESTI2012628, moderately
similar to Mus musculus STAP mRNA for sperm tail
associated protein. ).
Length = 797
Score = 34.3 bits (75), Expect = 0.28
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = -2
Query: 181 IEAKDLQVTRVMTDLNRMYTGFQETMQ---RKDEMMHKKDELLQ---VKDTQVSNLIAK 23
IE KD +T + L + F ET + +KD+ + +KDE+LQ K TQV N + K
Sbjct: 368 IERKDKDITILQCRLQELQLEFTETQKLTLKKDKFLQEKDEMLQELEKKLTQVQNSLLK 426
>BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 32.3 bits (70), Expect = 1.1
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 214 IERIIAIKDKQIEAKDLQVTRVMTDLNRM---YTGFQETMQRKDEMMHKKDELLQVKDTQ 44
++R I KQIEAKD ++T ++ D+ R+ G + ++ +L+ Q
Sbjct: 1303 LQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDTLQHQ 1362
Query: 43 VSNLIAKMIDLSDR 2
V +L ++ D +DR
Sbjct: 1363 VKSLEQQLAD-ADR 1375
>BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 32.3 bits (70), Expect = 1.1
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 214 IERIIAIKDKQIEAKDLQVTRVMTDLNRM---YTGFQETMQRKDEMMHKKDELLQVKDTQ 44
++R I KQIEAKD ++T ++ D+ R+ G + ++ +L+ Q
Sbjct: 1303 LQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDTLQHQ 1362
Query: 43 VSNLIAKMIDLSDR 2
V +L ++ D +DR
Sbjct: 1363 VKSLEQQLAD-ADR 1375
>AL834464-1|CAD39123.1| 236|Homo sapiens hypothetical protein
protein.
Length = 236
Score = 32.3 bits (70), Expect = 1.1
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 214 IERIIAIKDKQIEAKDLQVTRVMTDLNRM---YTGFQETMQRKDEMMHKKDELLQVKDTQ 44
++R I KQIEAKD ++T ++ D+ R+ G + ++ +L+ Q
Sbjct: 123 LQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDTLQHQ 182
Query: 43 VSNLIAKMIDLSDR 2
V +L ++ D +DR
Sbjct: 183 VKSLEQQLAD-ADR 195
>AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein.
Length = 1416
Score = 32.3 bits (70), Expect = 1.1
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 214 IERIIAIKDKQIEAKDLQVTRVMTDLNRM---YTGFQETMQRKDEMMHKKDELLQVKDTQ 44
++R I KQIEAKD ++T ++ D+ R+ G + ++ +L+ Q
Sbjct: 1303 LQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDTLQHQ 1362
Query: 43 VSNLIAKMIDLSDR 2
V +L ++ D +DR
Sbjct: 1363 VKSLEQQLAD-ADR 1375
>AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein.
Length = 1416
Score = 32.3 bits (70), Expect = 1.1
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 214 IERIIAIKDKQIEAKDLQVTRVMTDLNRM---YTGFQETMQRKDEMMHKKDELLQVKDTQ 44
++R I KQIEAKD ++T ++ D+ R+ G + ++ +L+ Q
Sbjct: 1303 LQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDTLQHQ 1362
Query: 43 VSNLIAKMIDLSDR 2
V +L ++ D +DR
Sbjct: 1363 VKSLEQQLAD-ADR 1375
>U51587-1|AAB81549.1| 767|Homo sapiens Golgi complex autoantigen
golgin-97 protein.
Length = 767
Score = 31.9 bits (69), Expect = 1.5
Identities = 15/77 (19%), Positives = 36/77 (46%)
Frame = -2
Query: 256 GAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHK 77
G + +EL K++ E+ + +Q+ A + + L ++T+Q +E + +
Sbjct: 313 GEEHVQELLKEKTLAEQNLEDTRQQLLAARSSQAKAINTLETRVRELEQTLQASEEQLQQ 372
Query: 76 KDELLQVKDTQVSNLIA 26
++ ++TQ+ L A
Sbjct: 373 SKGIVAAQETQIQELAA 389
>BC032853-1|AAH32853.1| 767|Homo sapiens golgi autoantigen, golgin
subfamily a, 1 protein.
Length = 767
Score = 31.9 bits (69), Expect = 1.5
Identities = 15/77 (19%), Positives = 36/77 (46%)
Frame = -2
Query: 256 GAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHK 77
G + +EL K++ E+ + +Q+ A + + L ++T+Q +E + +
Sbjct: 313 GEEHVQELLKEKTLAEQNLEDTRQQLLAARSSQAKAINTLETRVRELEQTLQASEEQLQQ 372
Query: 76 KDELLQVKDTQVSNLIA 26
++ ++TQ+ L A
Sbjct: 373 SKGIVAAQETQIQELAA 389
>AB208858-1|BAD92095.1| 400|Homo sapiens golgin 97 variant protein.
Length = 400
Score = 31.9 bits (69), Expect = 1.5
Identities = 15/77 (19%), Positives = 36/77 (46%)
Frame = -2
Query: 256 GAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHK 77
G + +EL K++ E+ + +Q+ A + + L ++T+Q +E + +
Sbjct: 212 GEEHVQELLKEKTLAEQNLEDTRQQLLAARSSQAKAINTLETRVRELEQTLQASEEQLQQ 271
Query: 76 KDELLQVKDTQVSNLIA 26
++ ++TQ+ L A
Sbjct: 272 SKGIVAAQETQIQELAA 288
>Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein.
Length = 2663
Score = 31.5 bits (68), Expect = 2.0
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Frame = -2
Query: 280 AHKRAASGGAQKTEELFKKQEFIERIIAIKDK---------QIEAKDLQVTRVMTDLNRM 128
A K +S GA KTE +K QE E+ ++++ Q+E +D + V + +
Sbjct: 854 AQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSPLQTVEREKTLI 913
Query: 127 YTGFQETMQRKDEMMHKKDELLQVKDT 47
Q+T++ + +KD+L Q++++
Sbjct: 914 TEKLQQTLEEVKTLTQEKDDLKQLQES 940
>AL451125-2|CAI14346.1| 767|Homo sapiens golgi autoantigen, golgin
subfamily a, 1 protein.
Length = 767
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/77 (19%), Positives = 36/77 (46%)
Frame = -2
Query: 256 GAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHK 77
G + +EL K++ E+ + +Q+ A + + L ++T+Q +E + +
Sbjct: 313 GEEHLQELLKEKTLAEQNLEDTRQQLLAARSSQAKAINTLETRVRELEQTLQASEEQLQQ 372
Query: 76 KDELLQVKDTQVSNLIA 26
++ ++TQ+ L A
Sbjct: 373 SKGIVAAQETQIQELAA 389
>AL354928-1|CAI39632.1| 767|Homo sapiens golgi autoantigen, golgin
subfamily a, 1 protein.
Length = 767
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/77 (19%), Positives = 36/77 (46%)
Frame = -2
Query: 256 GAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHK 77
G + +EL K++ E+ + +Q+ A + + L ++T+Q +E + +
Sbjct: 313 GEEHLQELLKEKTLAEQNLEDTRQQLLAARSSQAKAINTLETRVRELEQTLQASEEQLQQ 372
Query: 76 KDELLQVKDTQVSNLIA 26
++ ++TQ+ L A
Sbjct: 373 SKGIVAAQETQIQELAA 389
>AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein
protein.
Length = 2585
Score = 31.5 bits (68), Expect = 2.0
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Frame = -2
Query: 280 AHKRAASGGAQKTEELFKKQEFIERIIAIKDK---------QIEAKDLQVTRVMTDLNRM 128
A K +S GA KTE +K QE E+ ++++ Q+E +D + V + +
Sbjct: 834 AQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLI 893
Query: 127 YTGFQETMQRKDEMMHKKDELLQVKDT 47
Q+T++ + +KD+L Q++++
Sbjct: 894 TEKLQQTLEEVKTLTQEKDDLKQLQES 920
>BC146789-1|AAI46790.1| 1583|Homo sapiens GRIP and coiled-coil
domain containing 2 protein.
Length = 1583
Score = 30.3 bits (65), Expect = 4.5
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = -2
Query: 250 QKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKD 71
++ + KK E ER+I K++E + + +N + G +ET++ KD+ K +
Sbjct: 507 EEMDNFHKKCEREERLILELGKKVEQTIQYNSELEQKVNELTGGLEETLKEKDQNDQKLE 566
Query: 70 ELL 62
+L+
Sbjct: 567 KLM 569
>AY531265-1|AAT00461.1| 142|Homo sapiens biogenesis of
lysosome-related organelles complex 1 subunit 2 protein.
Length = 142
Score = 30.3 bits (65), Expect = 4.5
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = -2
Query: 325 KEQTVGD*TD-C-DIYRAHKRAASGGAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTR 152
KE D T+ C D++ +G T E +K E + ++ ++K +++ + ++R
Sbjct: 30 KEPAEADITELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAINISR 89
Query: 151 VMTDLNRMYTGFQ 113
+ DLN+ Y G Q
Sbjct: 90 NLKDLNQKYAGLQ 102
>AF273042-1|AAG34902.1| 685|Homo sapiens CTCL tumor antigen se1-1
protein.
Length = 685
Score = 30.3 bits (65), Expect = 4.5
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = -2
Query: 250 QKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKD 71
++ + KK E ER+I K++E + + +N + G +ET++ KD+ K +
Sbjct: 353 EEMDNFHKKCEREERLILELGKKVEQTIQYNSELEQKVNELTGGLEETLKEKDQNDQKLE 412
Query: 70 ELL 62
+L+
Sbjct: 413 KLM 415
>AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein.
Length = 1583
Score = 30.3 bits (65), Expect = 4.5
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = -2
Query: 250 QKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKD 71
++ + KK E ER+I K++E + + +N + G +ET++ KD+ K +
Sbjct: 507 EEMDNFHKKCEREERLILELGKKVEQTIQYNSELEQKVNELTGGLEETLKEKDQNDQKLE 566
Query: 70 ELL 62
+L+
Sbjct: 567 KLM 569
>AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein.
Length = 1635
Score = 30.3 bits (65), Expect = 4.5
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = -2
Query: 250 QKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKD 71
++ + KK E ER+I K++E + + +N + G +ET++ KD+ K +
Sbjct: 559 EEMDNFHKKCEREERLILELGKKVEQTIQYNSELEQKVNELTGGLEETLKEKDQNDQKLE 618
Query: 70 ELL 62
+L+
Sbjct: 619 KLM 621
>BC039121-1|AAH39121.1| 510|Homo sapiens SYNE1 protein protein.
Length = 510
Score = 29.9 bits (64), Expect = 6.0
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = -3
Query: 450 IQLIMKSKLPYAIELQEWLLE-EVIPHVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHT 274
+++ MK A +Q+WL + E + H YD K++E++ Q V + I +
Sbjct: 287 LKIQMKDFEVSAEPIQDWLSKTEKMVHESSNRLYDLPAKRREQQKLQSVLEEIHCYEPQL 346
Query: 273 NALQAVGRKKPRNFLKSKSLSNASSQLRTSRL 178
N L+ ++ SKS + SQL + L
Sbjct: 347 NRLKEKAQQLWEGQAASKSFRHRVSQLSSQYL 378
>AL357081-3|CAI41324.1| 675|Homo sapiens RP11-809I23.2 protein.
Length = 675
Score = 29.9 bits (64), Expect = 6.0
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = -3
Query: 450 IQLIMKSKLPYAIELQEWLLE-EVIPHVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHT 274
+++ MK A +Q+WL + E + H YD K++E++ Q V + I +
Sbjct: 271 LKIQMKDFEVSAEPIQDWLSKTEKMVHESSNRLYDLPAKRREQQKLQSVLEEIHCYEPQL 330
Query: 273 NALQAVGRKKPRNFLKSKSLSNASSQLRTSRL 178
N L+ ++ SKS + SQL + L
Sbjct: 331 NRLKEKAQQLWEGQAASKSFRHRVSQLSSQYL 362
>AL354928-10|CAI39642.1| 82|Homo sapiens golgi autoantigen, golgin
subfamily a, 1 protein.
Length = 82
Score = 29.9 bits (64), Expect = 6.0
Identities = 13/72 (18%), Positives = 35/72 (48%)
Frame = -2
Query: 241 EELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELL 62
+EL K++ E+ + +Q+ A + + L ++T+Q +E + + ++
Sbjct: 1 QELLKEKTLAEQNLEDTRQQLLAARSSQAKAINTLETRVRELEQTLQASEEQLQQSKGIV 60
Query: 61 QVKDTQVSNLIA 26
++TQ+ L++
Sbjct: 61 AAQETQIQELVS 72
>AL049548-6|CAI42747.1| 675|Homo sapiens RP11-809I23.2 protein.
Length = 675
Score = 29.9 bits (64), Expect = 6.0
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = -3
Query: 450 IQLIMKSKLPYAIELQEWLLE-EVIPHVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHT 274
+++ MK A +Q+WL + E + H YD K++E++ Q V + I +
Sbjct: 271 LKIQMKDFEVSAEPIQDWLSKTEKMVHESSNRLYDLPAKRREQQKLQSVLEEIHCYEPQL 330
Query: 273 NALQAVGRKKPRNFLKSKSLSNASSQLRTSRL 178
N L+ ++ SKS + SQL + L
Sbjct: 331 NRLKEKAQQLWEGQAASKSFRHRVSQLSSQYL 362
>AK056122-1|BAB71097.1| 560|Homo sapiens protein ( Homo sapiens
cDNA FLJ31560 fis, clone NT2RI2001409, weakly similar to
DYSTROPHIN. ).
Length = 560
Score = 29.9 bits (64), Expect = 6.0
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = -3
Query: 450 IQLIMKSKLPYAIELQEWLLE-EVIPHVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHT 274
+++ MK A +Q+WL + E + H YD K++E++ Q V + I +
Sbjct: 253 LKIQMKDFEVSAEPIQDWLSKTEKMVHESSNRLYDLPAKRREQQKLQSVLEEIHCYEPQL 312
Query: 273 NALQAVGRKKPRNFLKSKSLSNASSQLRTSRL 178
N L+ ++ SKS + SQL + L
Sbjct: 313 NRLKEKAQQLWEGQAASKSFRHRVSQLSSQYL 344
>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
Length = 8749
Score = 29.9 bits (64), Expect = 6.0
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = -3
Query: 450 IQLIMKSKLPYAIELQEWLLE-EVIPHVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHT 274
+++ MK A +Q+WL + E + H YD K++E++ Q V + I +
Sbjct: 3178 LKIQMKDFEVSAEPIQDWLSKTEKMVHESSNRLYDLPAKRREQQKLQSVLEEIHCYEPQL 3237
Query: 273 NALQAVGRKKPRNFLKSKSLSNASSQLRTSRL 178
N L+ ++ SKS + SQL + L
Sbjct: 3238 NRLKEKAQQLWEGQAASKSFRHRVSQLSSQYL 3269
>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
Length = 8797
Score = 29.9 bits (64), Expect = 6.0
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = -3
Query: 450 IQLIMKSKLPYAIELQEWLLE-EVIPHVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEHT 274
+++ MK A +Q+WL + E + H YD K++E++ Q V + I +
Sbjct: 3171 LKIQMKDFEVSAEPIQDWLSKTEKMVHESSNRLYDLPAKRREQQKLQSVLEEIHCYEPQL 3230
Query: 273 NALQAVGRKKPRNFLKSKSLSNASSQLRTSRL 178
N L+ ++ SKS + SQL + L
Sbjct: 3231 NRLKEKAQQLWEGQAASKSFRHRVSQLSSQYL 3262
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,564,988
Number of Sequences: 237096
Number of extensions: 1363856
Number of successful extensions: 3692
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3681
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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