Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120415.Seq
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    27   0.13 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.1  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   2.1  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   2.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   3.7  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   4.9  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   4.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   4.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   6.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   6.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.6  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.6  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +2

Query: 35  NTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNK 208
           +T  P  + PS+P   I + + T + +PG++  T  D  +D  R +ST       YN+
Sbjct: 58  STLDPGRKSPSSPR--ISSPSSTKSGSPGFLTYTKADRDVDLFRGSSTPESPEHYYNQ 113


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +2

Query: 119 GYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 217
           G +PP      + TS SNS +S  +     S E
Sbjct: 315 GLIPPEPISASLSTSNSNSPSSTNLIQNEASNE 347


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +2

Query: 119 GYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 217
           G +PP      + TS SNS +S  +     S E
Sbjct: 104 GLIPPEPISASLSTSNSNSPSSTNLIQNEASNE 136


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +2

Query: 119 GYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 217
           G +PP      + TS SNS +S  +     S E
Sbjct: 104 GLIPPEPISASLSTSNSNSPSSTNLIQNEASNE 136


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 666 TEWECCTSPIPPPCTGRPS*VVWPPRPKRLYP 571
           +E+E C  P    CT RP   +  P+P +  P
Sbjct: 79  SEYEKCDLPFNIDCTSRPK--LQEPQPSQHCP 108


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
 Frame = +2

Query: 29  YY--NTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNST 178
           YY  N   PP+ YP +       NA  Y ++   +P  T   +    R+  T
Sbjct: 35  YYENNQALPPITYPPSDWNCPQYNAPPYMSSVLQLPTVTEIQETQPQRTKPT 86


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +1

Query: 523 RCRRTR-KNFTTVALICWVKTLWPRRPNNSA 612
           RC+    K+F T+   C   + WP RP   A
Sbjct: 15  RCKLLSCKDFDTLYRDCTTASSWPGRPPKRA 45


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 547 NFCAYAGSEFSTNMPEIYSNRSAGTRPRCLVPTLFAT 437
           ++  Y   + +    EIY     G   R +VPTL AT
Sbjct: 438 DYACYCPPKHTGKNCEIYDRGFPGGLGRAVVPTLDAT 474


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
 Frame = +2

Query: 29  YY--NTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNST 178
           YY  N   PP+ YP +       NA  Y ++   +P  T   +    R+  T
Sbjct: 26  YYENNQALPPITYPPSDWNCPQYNAPPYMSSVLQLPTVTEIQETQPQRTKPT 77


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 795 IKSLIMLMCGKDATRLRSVCLAAEW 721
           + ++I L+   DAT  R VC  + W
Sbjct: 7   VATIITLLQPYDATPARIVCYFSNW 31


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +2

Query: 479  CRAIRIYFRHVCAKFAAGVRAKI 547
            C A   Y  HVC      VRAKI
Sbjct: 1005 CAADVFYICHVCYATIQEVRAKI 1027


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +2

Query: 479 CRAIRIYFRHVCAKFAAGVRAKI 547
           C A   Y  HVC      VRAKI
Sbjct: 286 CAADVFYICHVCYATIQEVRAKI 308


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -3

Query: 672  TVTEWECCTSPIPPPCTGRPS*VVWPPRP 586
            T T W    + IPPP    P  V  P +P
Sbjct: 1075 TTTNWPTQGTTIPPPAVVMPE-VDKPSQP 1102


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 754 STALCMFGGRVACLSNRVM*LLAS 683
           +  LC+FGG+V   S + M +L S
Sbjct: 333 TVCLCLFGGKVNDESTQPMLVLNS 356


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 754 STALCMFGGRVACLSNRVM*LLAS 683
           +  LC+FGG+V   S + M +L S
Sbjct: 333 TVCLCLFGGKVNDESTQPMLVLNS 356


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,298
Number of Sequences: 336
Number of extensions: 4370
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)