Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120414.Seq
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    27   0.11 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.8  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   1.8  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   1.8  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   4.1  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   4.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.4  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.2  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   7.2  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   9.5  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +2

Query: 35  NTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNK 208
           +T  P  + PS+P   I + + T + +PG++  T  D  +D  R +ST       YN+
Sbjct: 58  STLDPGRKSPSSPR--ISSPSSTKSGSPGFLTYTKADRDVDLFRGSSTPESPEHYYNQ 113


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +2

Query: 119 GYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 217
           G +PP      + TS SNS +S  +     S E
Sbjct: 315 GLIPPEPISASLSTSNSNSPSSTNLIQNEASNE 347


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +2

Query: 119 GYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 217
           G +PP      + TS SNS +S  +     S E
Sbjct: 104 GLIPPEPISASLSTSNSNSPSSTNLIQNEASNE 136


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +2

Query: 119 GYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 217
           G +PP      + TS SNS +S  +     S E
Sbjct: 104 GLIPPEPISASLSTSNSNSPSSTNLIQNEASNE 136


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
 Frame = +2

Query: 29  YY--NTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNST 178
           YY  N   PP+ YP +       NA  Y ++   +P  T   +    R+  T
Sbjct: 35  YYENNQALPPITYPPSDWNCPQYNAPPYMSSVLQLPTVTEIQETQPQRTKPT 86


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
 Frame = +2

Query: 29  YY--NTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNST 178
           YY  N   PP+ YP +       NA  Y ++   +P  T   +    R+  T
Sbjct: 26  YYENNQALPPITYPPSDWNCPQYNAPPYMSSVLQLPTVTEIQETQPQRTKPT 77


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +2

Query: 479  CRAIRLYFRHVCAKFAAGVRAKI 547
            C A   Y  HVC      VRAKI
Sbjct: 1005 CAADVFYICHVCYATIQEVRAKI 1027


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +2

Query: 479 CRAIRLYFRHVCAKFAAGVRAKI 547
           C A   Y  HVC      VRAKI
Sbjct: 286 CAADVFYICHVCYATIQEVRAKI 308


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -2

Query: 497 IVESLGRDSAALPCPNSFCNRIRWRIMVSSDSNRFT 390
           I+ +   D AAL    S CN +  RI V +  N  T
Sbjct: 84  ILNTRSGDEAALADMISRCNAVGVRIYVDTVINHMT 119


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -2

Query: 497 IVESLGRDSAALPCPNSFCNRIRWRIMVSSDSNRFT 390
           I+ +   D AAL    S CN +  RI V +  N  T
Sbjct: 85  ILNTRSGDEAALADMISRCNAVGVRIYVDTVINHMT 120


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 665 TEWECCTSPIPPPCTGRP 612
           +E+E C  P    CT RP
Sbjct: 79  SEYEKCDLPFNIDCTSRP 96


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 504 GMFVLNSLPAYAPKFY 551
           G  +LNS+  Y P+F+
Sbjct: 88  GFTILNSMHKYQPRFH 103


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -2

Query: 671  TVTEWECCTSPIPPPCTGRP 612
            T T W    + IPPP    P
Sbjct: 1075 TTTNWPTQGTTIPPPAVVMP 1094


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 484 SAGTRPRCLVP 452
           S G RP C+VP
Sbjct: 250 SVGMRPECVVP 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,058
Number of Sequences: 336
Number of extensions: 3741
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)