Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120413.Seq
         (770 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding pr...    25   3.4  
AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding pr...    25   3.4  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   6.0  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   6.0  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   7.9  

>AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding
          protein AgamOBP4 protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +2

Query: 20 VFCIHCVLERVDG 58
          +FC+ C++E +DG
Sbjct: 13 LFCVQCLIEHIDG 25


>AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding
          protein protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +2

Query: 20 VFCIHCVLERVDG 58
          +FC+ C++E +DG
Sbjct: 13 LFCVQCLIEHIDG 25


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = -2

Query: 484 VTYKYLIYVGVVRGNLIDVNAKPNTYTVKLLPGTFGNDYRIMLKPRRF 341
           VT    + + +    LIDVN K    T  L       DY++  +P+ +
Sbjct: 45  VTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVEQTWYDYKLKWEPKEY 92


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 466 IYVGVVRGNLIDVNAKPNTYTVKLLPGTFGNDYRIMLKP 350
           + +G+    LIDVN K    T  +      NDY++   P
Sbjct: 51  VKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNP 89


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 145 TMPPKNCTHLGG 110
           TMPPK C+H  G
Sbjct: 556 TMPPKGCSHDDG 567


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 808,803
Number of Sequences: 2352
Number of extensions: 15891
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)