Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120411.Seq
(733 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 111 4e-25
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 93 2e-19
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 76 3e-14
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 75 6e-14
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 70 2e-12
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 67 1e-11
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 66 4e-11
08_01_0397 - 3509186-3510291,3510322-3512335 65 5e-11
02_01_0381 - 2764331-2764342,2768966-2769907 54 9e-08
06_03_1255 + 28780181-28781172,28782065-28782932 54 1e-07
03_05_0865 - 28365430-28367640 47 1e-05
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 45 7e-05
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 44 2e-04
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 41 0.001
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 41 0.001
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 39 0.004
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 38 0.008
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 38 0.011
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 38 0.011
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 37 0.019
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 36 0.025
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 36 0.025
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 36 0.033
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 36 0.033
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 36 0.044
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 36 0.044
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 34 0.10
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 34 0.13
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 34 0.13
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 34 0.13
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 34 0.13
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 33 0.23
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 33 0.31
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 32 0.41
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 32 0.54
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 31 0.71
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 31 0.71
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 31 0.71
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 31 0.71
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 31 0.71
01_07_0205 - 41978437-41980599,41980805-41981215 31 0.71
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 31 0.94
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 31 1.2
10_08_0429 + 17845303-17845431,17845508-17845684,17845782-178458... 30 2.2
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 30 2.2
03_02_0189 - 6253659-6255380 29 2.9
02_05_1131 - 34328168-34328557,34328838-34328957,34329067-343291... 29 2.9
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 29 2.9
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 29 3.8
09_03_0167 + 12965030-12965356,12966100-12966387,12966704-129668... 29 5.0
07_03_0319 - 16745161-16745205,16745304-16745370,16745593-16745741 29 5.0
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287... 28 6.6
12_01_0642 + 5414964-5415410,5415535-5416677 28 8.8
01_04_0011 + 15067536-15068236,15068283-15068898 28 8.8
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 111 bits (268), Expect = 4e-25
Identities = 64/169 (37%), Positives = 91/169 (53%), Gaps = 3/169 (1%)
Frame = +3
Query: 231 PRLGFCFTQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVXGVEVHNPIQYFEEANFPD 410
P+ F PF KNFY P V S +V +YR ++TV G +V P++YF+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 411 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG*LKRVPAKRWPTSCQPLC-T*TTNRL- 584
Y Q + G+ EPTPIQ+QGWP+A+ G++++G + K L RL
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLE 225
Query: 585 FGE-VMVRLLWSWRLPRVSTTNSASCCRFGHTSYVRNTCVFGGAPKREQ 728
G+ +V +L R V + +FG S R+TC++GGAPK Q
Sbjct: 226 QGDGPIVLILAPTRELAVQIQQESG--KFGSYSRTRSTCIYGGAPKGPQ 272
Score = 65.3 bits (152), Expect = 5e-11
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = +2
Query: 509 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPT 628
+AQTGSGKTL+Y+LP +VH+ QP + +GDGPI L+LAPT
Sbjct: 199 IAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPT 238
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 93.1 bits (221), Expect = 2e-19
Identities = 39/83 (46%), Positives = 55/83 (66%)
Frame = +3
Query: 261 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVXGVEVHNPIQYFEEANFPDYVQQGVKTMG 440
F KNFY P+V + EVE YR E+TV G +V P++ F + FP+YV Q + G
Sbjct: 51 FEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAG 110
Query: 441 YKEPTPIQAQGWPIAMSGKNLVG 509
+ EPTPIQ+QGWP+A+ G++L+G
Sbjct: 111 FVEPTPIQSQGWPMALRGRDLIG 133
Score = 68.5 bits (160), Expect = 5e-12
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +2
Query: 509 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPT 628
+A+TGSGKTLAY+LPAIVH+N QP + GDGPI LVLAPT
Sbjct: 134 IAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPT 173
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 76.2 bits (179), Expect = 3e-14
Identities = 32/85 (37%), Positives = 51/85 (60%)
Frame = +3
Query: 255 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVXGVEVHNPIQYFEEANFPDYVQQGVKT 434
+PFNK+FY+ P+V S EV +Y + + V G +V PI+ F + FP + +
Sbjct: 177 EPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAK 236
Query: 435 MGYKEPTPIQAQGWPIAMSGKNLVG 509
GY++PT IQ Q PI +SG++++G
Sbjct: 237 QGYEKPTTIQCQALPIVLSGRDIIG 261
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/46 (52%), Positives = 34/46 (73%)
Frame = +2
Query: 509 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTES*HHK 646
+A+TGSGKT A++LP IVHI +QP + + +GPI +V APT H+
Sbjct: 262 IAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQ 307
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 74.9 bits (176), Expect = 6e-14
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Frame = +3
Query: 321 EEYRNNHEVTVXGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 500
E YR+ HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WPIA+ ++
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD 189
Query: 501 LVG*LKRVPAKRWP---TSCQPLCT*TTNRLFGEVMVRLLWSWRLPRVSTTNSASCCRFG 671
+V K K + N G ++ L + L +T +FG
Sbjct: 190 VVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVLVLAPTREL---ATQILEEAVKFG 246
Query: 672 HTSYVRNTCVFGGAPKREQ 728
+S + +TC++GGAPK Q
Sbjct: 247 RSSRISSTCLYGGAPKGPQ 265
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +2
Query: 509 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPT 628
+A+TGSGKTL Y+LP +HI R GP LVLAPT
Sbjct: 193 IAKTGSGKTLGYLLPGFMHIKRLQNNPR-SGPTVLVLAPT 231
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 69.7 bits (163), Expect = 2e-12
Identities = 40/136 (29%), Positives = 61/136 (44%)
Frame = +3
Query: 321 EEYRNNHEVTVXGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 500
E YR HE+T+ G E P F+ FP + + V+ G+ PTPIQAQ WPIA+ ++
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD 219
Query: 501 LVG*LKRVPAKRWPTSCQPLCT*TTNRLFGEVMVRLLWSWRLPRVSTTNSASCCRFGHTS 680
+V K K + +L ++T +FG +S
Sbjct: 220 IVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVLSPTRELATQIQDEAKKFGRSS 279
Query: 681 YVRNTCVFGGAPKREQ 728
+ + C++GGAPK Q
Sbjct: 280 RISSVCLYGGAPKGPQ 295
Score = 41.1 bits (92), Expect = 9e-04
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +2
Query: 509 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPT 628
VA+TGSGKTL Y++P + + R DGP LVL+PT
Sbjct: 223 VAKTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPT 261
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 67.3 bits (157), Expect = 1e-11
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Frame = +3
Query: 321 EEYRNNHEVTVXGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 500
+ YR +HEVT G V P FE FP + Q + G+ PTPIQAQ WP+A+ ++
Sbjct: 584 DAYRQHHEVTAVGENVPPPFMTFEATGFPPEILQEIHAAGFLNPTPIQAQTWPVALQNRD 643
Query: 501 LVG*LKRVPAKRWP---TSCQPLCT*TTNRLFGEVMVRLLWSWRLPRVSTTNSASCCRFG 671
+V K K + L N + G ++ L + L ++ +FG
Sbjct: 644 IVAIAKTGSGKTLGYLIPAFIHLRRYQNNPMLGPTVLVLAPTREL---ASQIQDEAVKFG 700
Query: 672 HTSYVRNTCVFGGAPK 719
+S V TC++GG K
Sbjct: 701 RSSRVSCTCLYGGTSK 716
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Frame = +2
Query: 509 VAQTGSGKTLAYILPAIVHI---NNQPPIRRGDGPIALVLAPT 628
+A+TGSGKTL Y++PA +H+ N P + GP LVLAPT
Sbjct: 647 IAKTGSGKTLGYLIPAFIHLRRYQNNPML----GPTVLVLAPT 685
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 65.7 bits (153), Expect = 4e-11
Identities = 31/85 (36%), Positives = 48/85 (56%)
Frame = +3
Query: 255 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVXGVEVHNPIQYFEEANFPDYVQQGVKT 434
QPF KN Y + + EV YR N E+ V G +V PI+ + ++ + +K
Sbjct: 243 QPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKK 302
Query: 435 MGYKEPTPIQAQGWPIAMSGKNLVG 509
+G+++P PIQAQ PI MSG++ +G
Sbjct: 303 LGFEKPMPIQAQALPIIMSGRDCIG 327
Score = 62.5 bits (145), Expect = 3e-10
Identities = 24/40 (60%), Positives = 34/40 (85%)
Frame = +2
Query: 509 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPT 628
+A+TGSGKTLA++LP + H+ +QPP+ GDGPI L++APT
Sbjct: 328 IAKTGSGKTLAFVLPMLRHVKDQPPVVPGDGPIGLIMAPT 367
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 65.3 bits (152), Expect = 5e-11
Identities = 31/85 (36%), Positives = 48/85 (56%)
Frame = +3
Query: 255 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVXGVEVHNPIQYFEEANFPDYVQQGVKT 434
QPF KNFY + K + EV YR E+ V G +V PI+ + ++ + +K
Sbjct: 382 QPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKK 441
Query: 435 MGYKEPTPIQAQGWPIAMSGKNLVG 509
+G+++P IQAQ PI MSG++ +G
Sbjct: 442 LGFEKPMSIQAQALPIIMSGRDCIG 466
Score = 59.3 bits (137), Expect = 3e-09
Identities = 23/40 (57%), Positives = 33/40 (82%)
Frame = +2
Query: 509 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPT 628
+A+TGSGKTLA++LP + H+ +QP + GDGPI L++APT
Sbjct: 467 IAKTGSGKTLAFVLPMLRHVKDQPAVVPGDGPIGLIMAPT 506
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 54.4 bits (125), Expect = 9e-08
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +3
Query: 240 GFCFTQPFNKNFYDPHPTVLKRSPY-EVEEYRNNHEVTVXGVEVHNPIQYFEEANFPDYV 416
G ++ P K + P P L+R P + +E R + V G +V P + F + P+ +
Sbjct: 136 GITYSDPL-KTGWKP-PLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLRLPEPM 193
Query: 417 QQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 509
+ ++ G +PTPIQ QG P+ +SG++++G
Sbjct: 194 LRKLREKGIVQPTPIQVQGLPVVLSGRDMIG 224
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +2
Query: 509 VAQTGSGKTLAYILPAI-VHINNQ--PPIRRGDGPIALVLAPT 628
+A TGSGKTL ++LP I V + + PI G+GP +++ P+
Sbjct: 225 IAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPS 267
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +3
Query: 240 GFCFTQPFNKNFYDPHPTVLKRSPYE-VEEYRNNHEVTVXGVEVHNPIQYFEEANFPDYV 416
G +++P + P L+R P + R + + V G +V P + F + P+ +
Sbjct: 127 GISYSEPITTGWRPP--LRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPI 184
Query: 417 QQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 509
+ ++ G ++PTPIQ QG P+A+SG++++G
Sbjct: 185 LRALRGKGIEKPTPIQVQGLPVALSGRDMIG 215
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +2
Query: 428 KDNGLQRTDAYSSSRLADSYVWKEFSWVAQTGSGKTLAYILPAIVHINNQP---PIRRGD 598
+ G+++ L + ++ +A TGSGKTL ++LP I+ + PI G+
Sbjct: 189 RGKGIEKPTPIQVQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGE 248
Query: 599 GPIALVLAPT 628
GP L++ P+
Sbjct: 249 GPFGLIVCPS 258
>03_05_0865 - 28365430-28367640
Length = 736
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Frame = +2
Query: 509 VAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPT 628
+A+TGSGKT A++LP + +I PPI +GP A+V+APT
Sbjct: 358 IAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPT 400
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/61 (26%), Positives = 35/61 (57%)
Frame = +3
Query: 327 YRNNHEVTVXGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
+R + ++ G +V P++ + E+ + + V+ GYKEP+PIQ P+ + ++++
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVI 356
Query: 507 G 509
G
Sbjct: 357 G 357
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +3
Query: 345 VTVXGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
V V G +V P FE A + V + V GY+ PTP+Q PIA++G++L+
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLM 125
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 512 AQTGSGKTLAYILPAI 559
AQTGSGKT A+ LP +
Sbjct: 128 AQTGSGKTAAFCLPVV 143
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/41 (56%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = +2
Query: 512 AQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPT 628
A TG+GKTLAY+ P IVH+ +P + R DG ALVL PT
Sbjct: 68 AATGTGKTLAYLAP-IVHLLQMREPRVERTDGTFALVLVPT 107
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 435 MGYKEPTPIQAQGWPIAMSGKNLV 506
MG++ PT IQAQ P+AMSG++++
Sbjct: 42 MGFQAPTRIQAQAIPVAMSGQHML 65
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 330 RNNHEVTVXGVEVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 497
R ++ + G V P++ FEE Y+ + +G++EPTPIQ Q PI +SG+
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +2
Query: 512 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPT 628
A TGSGKTLA++ P ++ I +P + +G A++L PT
Sbjct: 190 APTGSGKTLAFLFPILMKI--KPGSK--EGVKAVILCPT 224
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = +3
Query: 315 EVEEYRNNHEVTVXGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 494
++ R+ ++ V G +V +PI F + P+ + ++ GY PTP+Q Q P ++
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICN 219
Query: 495 KNLV 506
++L+
Sbjct: 220 RSLL 223
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = +2
Query: 512 AQTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPT 628
A TGSGKT ++++P I H ++ R D GP+A+VLAPT
Sbjct: 226 ADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAPT 266
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 345 VTVXGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
V G +V P+ F E + D + + ++ Y +PTP+Q PI+++G++L+
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLM 278
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 5/44 (11%)
Frame = +2
Query: 512 AQTGSGKTLAYILPAIVHI-NNQPPIR-RGDG---PIALVLAPT 628
AQTGSGKT A+ P I I +++PP R RG P+AL+L+PT
Sbjct: 281 AQTGSGKTAAFCFPIISGIMSSRPPQRPRGSRTAYPLALILSPT 324
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +2
Query: 485 YVWKEFSWVAQTGSGKTLAYILPAIVHINNQPPI 586
Y+ K+ A+TG+GKT+A++LPAI ++ PPI
Sbjct: 490 YIGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPI 523
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Frame = +2
Query: 494 KEFSWVAQTGSGKTLAYILPAIVHIN---NQPPIRRGDGPIALVLAPT 628
++F +A TGSGKT+A+ +PA++H+ + ++G P LVL+PT
Sbjct: 130 RDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKG-VPRVLVLSPT 176
Score = 35.1 bits (77), Expect = 0.058
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 375 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 509
P+ F P V K G++ P+PIQA WP + G++ +G
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRDFIG 134
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +3
Query: 345 VTVXGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
V G +V P F E + D + + ++ Y +PTP+Q PI+++G++L+
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLM 364
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Frame = +2
Query: 512 AQTGSGKTLAYILPAIVHI--NNQPPIRRGDG---PIALVLAPT 628
AQTGSGKT A+ P I I + PP RG P+AL+L+PT
Sbjct: 367 AQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPT 410
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 509
F E N + + + +GY++PTPIQA P+A++G+++ G
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICG 236
Score = 31.1 bits (67), Expect = 0.94
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +2
Query: 425 CKDNGLQRTDAYSSSRLADSYVWKEFSWVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 604
C+ G Q+ ++ + + ++ A TGSGKT A+ LP + + +P +R
Sbjct: 209 CEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRP--KRVPAI 266
Query: 605 IALVLAPTE----S*HHKFSKLLQIWTHILC 685
L+L PT H KL Q +T I C
Sbjct: 267 RVLILTPTRELAAQVHSMIEKLAQ-FTDIRC 296
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 345 VTVXGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
V G EV P+ F E + + ++ Y PTP+Q PI+++G++L+
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLM 196
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
Frame = +2
Query: 512 AQTGSGKTLAYILPAIVHINNQPPIRRGDG-------PIALVLAPT 628
AQTGSGKT A+ P I I PP +R P+AL+L+PT
Sbjct: 199 AQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPT 244
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 36.3 bits (80), Expect = 0.025
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +2
Query: 512 AQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPT 628
A+TG+GKTLA+ +P I + + +RRG P LVLAPT
Sbjct: 174 AKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPT 215
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 35.9 bits (79), Expect = 0.033
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 503
FE + V +GV+ GY+ PTPIQ + P+ ++G ++
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDI 66
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 509 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPT 628
+A+TGSGKT A+++P I + G G AL+L+PT
Sbjct: 69 MARTGSGKTAAFLVPMIQRLRRHD---AGAGIRALILSPT 105
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 35.9 bits (79), Expect = 0.033
Identities = 17/67 (25%), Positives = 35/67 (52%)
Frame = +2
Query: 428 KDNGLQRTDAYSSSRLADSYVWKEFSWVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 607
K G +R ++ + K+ + A TGSGKTLA+++P + + +P + +
Sbjct: 39 KGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRRPSPPKPHEVL 98
Query: 608 ALVLAPT 628
++++PT
Sbjct: 99 GIIISPT 105
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 35.5 bits (78), Expect = 0.044
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 375 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 509
P + E P+ V MG+KEPT IQA+ P A+ G++L+G
Sbjct: 40 PSTFAELGVVPELVA-ACDAMGWKEPTRIQAEAIPHALEGRDLIG 83
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +2
Query: 425 CKDNGLQRTDAYSSSRLADSYVWKEFSWVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 604
C G + + + + ++ + QTGSGKT A+ LP I + Q +
Sbjct: 56 CDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQALLKQD---KPQAL 112
Query: 605 IALVLAPT 628
A VL+PT
Sbjct: 113 FACVLSPT 120
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 35.5 bits (78), Expect = 0.044
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 428 KDNGLQRTDAYSSSRLADSYVWKEFSWVAQTGSGKTLAYILPAIVHINNQPPIRR 592
KD G +R + L K+ A+TG+GKT+A++LPAI ++ P RR
Sbjct: 22 KDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRR 76
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2
Query: 494 KEFSWVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPT 628
K+ A+TGSGKTLA+++PAI +++ + R +G +V+ PT
Sbjct: 134 KDVMGAAKTGSGKTLAFLIPAIEMLHHAHFMPR-NGTGVVVVCPT 177
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +2
Query: 512 AQTGSGKTLAYILPAI-VHINNQPPIRRGDGPIALVLAPT 628
A+TG+GKTLA+ +P + I + G P+A+VLAPT
Sbjct: 142 AKTGTGKTLAFGIPILDAIIRHNEKNSPGKFPLAIVLAPT 181
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +2
Query: 425 CKDNGLQRTDAYSSSRLADSYVWKEFSWVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 604
C G++ A + + ++ +A+TGSGKT A+ LP I+H + P G
Sbjct: 92 CDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALP-ILHRLGEDPY----GV 146
Query: 605 IALVLAPT 628
AL LAPT
Sbjct: 147 AALALAPT 154
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +2
Query: 512 AQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPT 628
A+TG+GKTLA+ +P + I + G P+A++LAPT
Sbjct: 137 ARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLAIILAPT 176
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Frame = +2
Query: 512 AQTGSGKTLAYILP---AIVHINNQPPIRRGDGPIALVLAPT----ES*HHKFSKLLQIW 670
A+TGSGKT AY+LP ++ ++ + IR+ P +L PT + H++ S LL+
Sbjct: 127 AKTGSGKTFAYLLPMLHELLKLSAEGRIRK-SAPNVFILVPTRELCQQVHNEASSLLEFC 185
Query: 671 T 673
T
Sbjct: 186 T 186
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
F+E + +++ ++ G + TPIQ + P+ + GK++V
Sbjct: 85 FDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVV 124
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 33.1 bits (72), Expect = 0.23
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 405 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
P++V Q + +GY PT +Q Q P+ +SG++ +
Sbjct: 49 PEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCI 82
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 512 AQTGSGKTLAYILPAIVHIN-NQPPIRRGDGPIALVLAPTES*HHKFSKLLQIWTHILCS 688
AQTGSGKTLAY+L I+ + ++ ALV+ PT + +K+ +I C+
Sbjct: 85 AQTGSGKTLAYLLSVFSAIDFGRSSVQ------ALVVVPTRELGMQVTKVARILAAKACT 138
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 32.7 bits (71), Expect = 0.31
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +2
Query: 428 KDNGLQRTDAYSSSRLADSYVWKEFSWVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 607
KD G ++ + L ++ A+TG+GKT+A++LPAI ++ P R
Sbjct: 90 KDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIELLSTLP---RSPSIN 146
Query: 608 ALVLAPT 628
LV+ PT
Sbjct: 147 LLVICPT 153
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 426 VKTMGYKEPTPIQAQGWPIAM-SGKNLVG 509
V+ +G+KEPTPIQ +P A GK+++G
Sbjct: 157 VRRLGFKEPTPIQKACFPAAAHQGKDVIG 185
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 476 ADSYVWKEFSWVAQTGSGKTLAYILPAI 559
A ++ K+ A+TGSGKTLA+ LP +
Sbjct: 175 AAAHQGKDVIGAAETGSGKTLAFGLPIL 202
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 31.9 bits (69), Expect = 0.54
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +2
Query: 512 AQTGSGKTLAYILPAIVHINN--QPPIRR---GDGPIALVLAPT 628
A+TG GKTLA++LP + + N RR G P LVL PT
Sbjct: 148 ARTGQGKTLAFVLPILESLVNGTHKASRRTDYGRPPTVLVLLPT 191
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 315 EVEEYRNNHEVTVXGVEVHNPIQYFEEANF--PDYVQQGVKTMGYKEPTPIQAQGWPIAM 488
E EE + E+T G E +P ANF + +++ +K+ G K PIQA + + +
Sbjct: 82 EEEEDDDEGELTASGDE--DPADPNALANFRISESLREKLKSKGIKALFPIQATTFDLVL 139
Query: 489 SGKNLVG 509
G +LVG
Sbjct: 140 DGHDLVG 146
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 31.5 bits (68), Expect = 0.71
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG*LKRVPAK 533
FE+ + G+ G++ P+PIQ + PIA++G +++ K K
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 197
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 31.5 bits (68), Expect = 0.71
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 435 MGYKEPTPIQAQGWPIAMSGKNLVG 509
MG+K PT IQA+ P A+ G++++G
Sbjct: 1 MGWKAPTRIQAEVIPFALQGRDVIG 25
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 509 VAQTGSGKTLAYILPAI 559
V QTGSGKT A+ LP I
Sbjct: 26 VGQTGSGKTAAFALPII 42
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 31.5 bits (68), Expect = 0.71
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 512 AQTGSGKTLAYILPAI---VHINNQPPIRRGDGPIALVLAPT 628
A+TGSGKTLA+++PAI + P R G G +VL PT
Sbjct: 130 AKTGSGKTLAFLIPAIELLCRLRFSP--RNGTG--VIVLCPT 167
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 31.5 bits (68), Expect = 0.71
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG*LKRVPAK 533
FE+ + G+ G++ P+PIQ + PIA++G +++ K K
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 174
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 31.5 bits (68), Expect = 0.71
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG*LKRVPAK 533
FE+ + G+ G++ P+PIQ + PIA++G +++ K K
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 184
>01_07_0205 - 41978437-41980599,41980805-41981215
Length = 857
Score = 31.5 bits (68), Expect = 0.71
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +2
Query: 410 LCATRCKDNGLQRTDAYSSSRLADSYVW---KEFSWVAQTGSGKTLAYILPAIVHINNQP 580
L TR +N + AY +LAD YVW K+ ++V + G+ L +I A+V I++
Sbjct: 243 LMTTR-SENKSSTSRAYYLGKLADEYVWSIAKQIAFVKEE-EGQDLVHIKEAVVTISDGI 300
Query: 581 PI 586
P+
Sbjct: 301 PL 302
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 378 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
+ FEE + V + MG +PT IQ G P ++G ++V
Sbjct: 109 VDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVV 151
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = +2
Query: 512 AQTGSGKTLAYILPAI-VHINN 574
+ TGSGKTLAY+LP + + I N
Sbjct: 154 SHTGSGKTLAYLLPLVQIEIEN 175
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +2
Query: 431 DNGLQRTDAYSSSRLADSYVWKEFSWVAQTGSGKTLAYILPAIVHINN--QPPIRRGDGP 604
D G +T + L K+ A+TG+GK+ A++LPAI + N + P
Sbjct: 359 DAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIESVLNAMKSHTNHRVSP 418
Query: 605 I-ALVLAPT 628
I +L+L PT
Sbjct: 419 IFSLILCPT 427
>10_08_0429 +
17845303-17845431,17845508-17845684,17845782-17845895,
17846386-17846520,17847659-17847790,17847919-17848071,
17848574-17848709,17849338-17849443,17849538-17849730,
17849803-17849963,17850227-17850442,17850732-17850997,
17851505-17851779,17851871-17852327,17853973-17854055,
17854260-17854469,17854897-17855373,17855462-17855743,
17855910-17856236,17856418-17856507,17856788-17856899,
17857004-17857104,17857524-17857568
Length = 1458
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 509 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGP--IALVLAPTES*HHKFSKLLQIWTHI 679
V TGSGKT+ ++ A H +R G+ P I + LAPT H+ ++++ +T +
Sbjct: 58 VLDTGSGKTMVAVMLAREHARR---VRAGEAPRRIVVFLAPTVHLVHQQFEVIREYTDL 113
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +2
Query: 515 QTGSGKTLAYILPAIVHINNQ--PPIRRGD--GPIALVLAPT 628
Q+GSGKTLAY+ P + ++ + + R P +VL PT
Sbjct: 285 QSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPRVVVLTPT 326
>03_02_0189 - 6253659-6255380
Length = 573
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2
Query: 518 TGSGKTLAYILPAIVHINNQPPIRR 592
TGSGKTLAY+LP + I P++R
Sbjct: 177 TGSGKTLAYLLPILSEIG---PLKR 198
>02_05_1131 -
34328168-34328557,34328838-34328957,34329067-34329185,
34329659-34329767,34329847-34329885,34341125-34341203,
34341483-34341547,34341850-34341905,34342141-34342233,
34342312-34342579
Length = 445
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 728 LLSFRSTTKHTRVTNIRCVSKSAATC*ICGAN 633
+L F + + HTR+ I S+S+ TC +CG N
Sbjct: 264 MLHFDALSSHTRIVKI---SRSSPTCKVCGEN 292
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2
Query: 518 TGSGKTLAYILPAIVHINNQPPIRR 592
TGSGKTLAY+LP + I P++R
Sbjct: 639 TGSGKTLAYLLPILSEIG---PLKR 660
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 509
F+E + + G++ GY E + IQ P A+ G++++G
Sbjct: 82 FDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLG 122
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/17 (58%), Positives = 16/17 (94%)
Frame = +2
Query: 512 AQTGSGKTLAYILPAIV 562
A+TGSGKTLA+++P ++
Sbjct: 124 AKTGSGKTLAFVIPVLM 140
>09_03_0167 +
12965030-12965356,12966100-12966387,12966704-12966826,
12967229-12967611,12967863-12968190,12968324-12968353,
12968837-12968989,12969510-12969815
Length = 645
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
Frame = +2
Query: 437 GLQRTDAYSSSRLADSYVWKEFSWVAQTGSGKTLAYILPAIVHI---------NNQPPIR 589
GL R ++ + + A+TGSGKT Y++P I + N +
Sbjct: 101 GLARPSLVQAACIPHVLTTNDVIVAAETGSGKTHGYLVPLIEKLCSKSISAEDGNSQDVT 160
Query: 590 RGDGPIALVLAP 625
G IALVL P
Sbjct: 161 SGSPNIALVLCP 172
>07_03_0319 - 16745161-16745205,16745304-16745370,16745593-16745741
Length = 86
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 408 DYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG*LKRVPAKRWPT 545
D+ ++G KT G + PTP+ + GKN G R +PT
Sbjct: 10 DWEEKGRKTQGGRAPTPLPPCAATAEIGGKNRGGGFLRQRRSLYPT 55
>08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,
2875909-2875947,2876309-2876354,2877380-2877922,
2878827-2880847,2880972-2881215,2881642-2881684,
2881923-2881962,2883580-2883675,2883712-2883759,
2883964-2884290
Length = 1498
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 223 MRRPDWDSVSLNLSTKTFMIHILQFSKDHH 312
MR PD D + K F IH+ S DHH
Sbjct: 1226 MRSPDDDKPTSWSDQKVFEIHVYPSSNDHH 1255
>12_01_0642 + 5414964-5415410,5415535-5416677
Length = 529
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 731 GLLSFRSTTKHTRVTNIRCVSKSAATC*ICGANSR*APRP 612
G F + HT ++RCV AA C +C R AP P
Sbjct: 18 GQAIFTAECSHT--FHLRCVPGGAAACPVCATPWRDAPSP 55
>01_04_0011 + 15067536-15068236,15068283-15068898
Length = 438
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 247 VSLNLSTKTFMIHILQFSKDHHMKSKSTE 333
V NLS K + +L+ +K+ H+ SKST+
Sbjct: 193 VGCNLSGKEVALELLRVAKEVHLSSKSTK 221
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,250,830
Number of Sequences: 37544
Number of extensions: 379070
Number of successful extensions: 895
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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