Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120411.Seq
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    38   3e-04
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    26   1.0  
EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           26   1.0  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   3.2  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   9.7  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 37.9 bits (84), Expect = 3e-04
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = +3

Query: 342 EVTVXGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
           +V V G    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLM 215



 Score = 34.7 bits (76), Expect = 0.003
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = +2

Query: 512 AQTGSGKTLAYILPAIVH-INNQPPIR-RGDGPIALVLAPT 628
           AQTGSGKT A++LP I H ++ +  +  R   P  +++APT
Sbjct: 218 AQTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPT 258


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 491 WKEFSWVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 601
           +K  ++ AQ  + ++   I  A+V +  Q  +RR DG
Sbjct: 456 YKTLNYKAQKAAARSHVKIFKALVRLRKQRTLRRNDG 492


>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 95  TVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKNSLE 214
           T++ +L+E   S +  LDL    +D  +L +L    +SLE
Sbjct: 140 TMLRDLDEGCRSRVQYLDLKLNEIDTVNLAELAASSDSLE 179


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 7/45 (15%)
 Frame = -1

Query: 271  FLLKG*VKQNPNL---GDACSDLQRILF----SHQILQILQIYCH 158
            F+ KG ++ +PN    GDA  D++ +LF    S +I   +Q  CH
Sbjct: 926  FVEKGILEGSPNCPECGDAVEDVEHVLFHCPRSDRIRNEMQQRCH 970


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 149 LATVAVDLEDLEDLVGKKNSLEVRTCVAQIGIL 247
           L  +A+D+  L+  +GKK +L V   +  +G +
Sbjct: 176 LMAIAIDMNPLKPRMGKKATLCVAASIWIVGTI 208


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,191
Number of Sequences: 2352
Number of extensions: 14181
Number of successful extensions: 37
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)