Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120410.Seq
         (716 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    27   0.15 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    27   0.15 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    27   0.15 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    25   0.61 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.7  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 458 TILLGFYFTILQAYEYIKLLLQLLIEFMDPLFA 556
           T+LLG  F    A+EYI+L  Q ++ F+  LFA
Sbjct: 122 TLLLGVDFVKEYAFEYIQLYSQFILYFL--LFA 152


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 458 TILLGFYFTILQAYEYIKLLLQLLIEFMDPLFA 556
           T+LLG  F    A+EYI+L  Q ++ F+  LFA
Sbjct: 122 TLLLGVDFVKEYAFEYIQLYSQFILYFL--LFA 152


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 458 TILLGFYFTILQAYEYIKLLLQLLIEFMDPLFA 556
           T+LLG  F    A+EYI+L  Q ++ F+  LFA
Sbjct: 442 TLLLGVDFVKEYAFEYIQLYSQFILYFL--LFA 472


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 455 LTILLGFYFTILQAYEYIKLLLQLLIEFMDPLF 553
           L IL       L++Y YIKL++ +L++F+   F
Sbjct: 37  LVILSSIDRPYLKSYTYIKLVVSVLMDFIAYFF 69


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 448 IIFNYFIRILFYYFTS 495
           + F +FI   FY+FT+
Sbjct: 237 VSFYFFISTFFYFFTT 252


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 448 IIFNYFIRILFYYFTS 495
           + F +FI   FY+FT+
Sbjct: 233 VSFYFFISTFFYFFTT 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,263
Number of Sequences: 336
Number of extensions: 2385
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)