Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120409.Seq
(760 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 2.4
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 23 3.1
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 23 4.1
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 23 4.1
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 4.1
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 4.1
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 4.1
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 23 4.1
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 4.1
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 4.1
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 5.4
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 5.4
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 9.5
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.4 bits (48), Expect = 2.4
Identities = 9/44 (20%), Positives = 24/44 (54%)
Frame = +1
Query: 106 LRNAFLFVNRSGKL*RFNSVGCHIIIVEYHMGCVSTTLTQIKRY 237
+R A LF+N + R ++ C ++++ + GC+ + ++ +
Sbjct: 263 VRKATLFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGF 306
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +3
Query: 63 INKRFFLVNCRNFG 104
++ RF+L++CRN G
Sbjct: 114 VSARFWLMDCRNIG 127
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = +3
Query: 39 KKNNSVYIINKRFFLVNCRNFGFA*CISLCKPIRKTLKIQFG 164
+ ++ ++I R + +N + F F I+ KP++ ++I G
Sbjct: 480 RNDDKPFLIKIRQYRLNHKPFNFHITINADKPMKAAIRIFIG 521
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = +3
Query: 39 KKNNSVYIINKRFFLVNCRNFGFA*CISLCKPIRKTLKIQFG 164
+ ++ ++I R + +N + F F I+ KP++ ++I G
Sbjct: 480 RNDDKPFLIKIRQYRLNHKPFNFHITINADKPMKAAIRIFIG 521
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 12 SALSDSTV*KKNNSVYIINKRFFLVNCR 95
S+LS+ T+ NN Y N + NC+
Sbjct: 83 SSLSNKTIHNNNNYKYNYNNNNYNNNCK 110
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 12 SALSDSTV*KKNNSVYIINKRFFLVNCR 95
S+LS+ T+ NN Y N + NC+
Sbjct: 83 SSLSNKTIHNNNNYKYNYNNNNYNNNCK 110
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 12 SALSDSTV*KKNNSVYIINKRFFLVNCR 95
S+LS+ T+ NN Y N + NC+
Sbjct: 83 SSLSNKTIHNNNNYKYNYNNNNYNNNCK 110
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = -2
Query: 438 GCHYCQRNE--WKSKIAIVPVLLTC 370
GC+ N W S AI P +++C
Sbjct: 500 GCYQLAINHIRWNSAFAIAPAVISC 524
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 637 RS*SELLLKVGSLPNQSNVFTEISFKKRHLEC 732
+S +E+ + S+PN ++ ++E S + LEC
Sbjct: 782 QSYAEVGVLFASMPNFADFYSEESINNQGLEC 813
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = -2
Query: 438 GCHYCQRNE--WKSKIAIVPVLLTC 370
GC+ N W S AI P +++C
Sbjct: 590 GCYQLAINHIRWNSAFAIAPAVISC 614
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 12 SALSDSTV*KKNNSVYIINKRFFLVNCR 95
S+LS+ T+ NN Y N + NC+
Sbjct: 83 SSLSNRTIHNNNNYKYNYNNNNYNNNCK 110
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 471 FFNILCGREILYYTI 515
FFNI R+ L+YT+
Sbjct: 226 FFNITLRRKTLFYTV 240
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 580 SVFFSNPSHSSNVEFPRDLRS*SELLLKVGSLPNQSNVF 696
+V NP+ + + + S+L+L V LPN+ ++F
Sbjct: 63 TVIIKNPAMQTATNYYLFSLAISDLILLVLGLPNELSLF 101
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,606
Number of Sequences: 438
Number of extensions: 4929
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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