Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120408.Seq
         (680 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0036 - 9950353-9950379,9950753-9950791,9951021-9951194,995...    24   6.3  

>04_03_0036 -
           9950353-9950379,9950753-9950791,9951021-9951194,
           9951287-9951415,9951782-9952012,9952655-9952732,
           9953035-9953055,9953790-9953855,9953935-9954015,
           9954148-9954920,9955461-9955654,9956723-9956817,
           9958190-9958219,9958334-9958453,9959185-9959262,
           9959428-9959505,9960459-9960488,9960614-9960739,
           9961239-9961379,9963416-9963532,9963619-9963670,
           9963759-9963890,9964668-9964720,9964816-9964911,
           9965255-9965260,9965416-9965561,9966494-9966629,
           9966885-9967038,9968017-9968154,9968268-9968614
          Length = 1295

 Score = 24.2 bits (50), Expect(2) = 6.3
 Identities = 14/54 (25%), Positives = 24/54 (44%)
 Frame = +1

Query: 373 TFCQCVGDRQRRIGAS*HNVKRGAPRNGALANRMADIAQDVIAKPTIPNCYIRW 534
           + C   GD   ++  S H       +NG+L+     I  D+I +  +P+C   W
Sbjct: 573 SICWICGDHGSKVCCSGHG------KNGSLSVLQQSIRPDLITEVELPSCRGIW 620



 Score = 22.2 bits (45), Expect(2) = 6.3
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 235 EVIPQCWHGQVRAGRQDGHKLW 300
           +++PQCW+  V A        W
Sbjct: 555 QILPQCWNPLVAAVHHQDSICW 576


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,984,176
Number of Sequences: 37544
Number of extensions: 444978
Number of successful extensions: 1192
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)