Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120408.Seq
(680 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ100955-1|AAZ08961.1| 119|Homo sapiens immunoglobulin heavy ch... 33 1.2
AF343401-1|AAK51398.1| 106|Homo sapiens psoriasis vulgaris immu... 33 1.2
AY941958-1|AAY33307.1| 121|Homo sapiens anti-rabies virus immun... 32 2.2
AY941920-1|AAY33269.1| 121|Homo sapiens anti-rabies virus immun... 32 2.2
AY392970-1|AAS85909.1| 144|Homo sapiens immunoglobulin heavy ch... 32 2.2
AY392963-1|AAS85902.1| 147|Homo sapiens immunoglobulin heavy ch... 32 2.2
AF460393-1|AAM87764.1| 63|Homo sapiens immunoglobulin heavy ch... 31 2.9
DQ454453-1|ABE66537.1| 85|Homo sapiens immunoglobulin heavy ch... 31 3.8
AY941987-1|AAY33335.1| 121|Homo sapiens anti-rabies virus immun... 31 3.8
AY392969-1|AAS85908.1| 144|Homo sapiens immunoglobulin heavy ch... 31 3.8
AF209897-1|AAF40165.1| 106|Homo sapiens immunoglobulin heavy ch... 31 3.8
Y12038-1|CAA72769.1| 90|Homo sapiens immunoglobulin heavy chai... 31 5.0
AY941879-1|AAY33228.1| 121|Homo sapiens anti-rabies virus immun... 31 5.0
AY941877-1|AAY33226.1| 121|Homo sapiens anti-rabies virus immun... 31 5.0
AY429735-1|AAR38515.1| 90|Homo sapiens immunoglobulin heavy ch... 31 5.0
AF460501-1|AAM87872.1| 72|Homo sapiens immunoglobulin heavy ch... 31 5.0
AY941923-1|AAY33272.1| 121|Homo sapiens anti-rabies virus immun... 30 6.6
AY640519-1|AAT65122.1| 120|Homo sapiens immunoglobulin E variab... 30 6.6
AF460646-1|AAM88017.1| 63|Homo sapiens immunoglobulin heavy ch... 30 6.6
AB067074-1|BAC02112.1| 120|Homo sapiens immunoglobulin heavy ch... 30 6.6
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 30 8.8
DQ065698-1|ABA00108.1| 121|Homo sapiens immunoglobulin epsilon ... 30 8.8
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 30 8.8
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 30 8.8
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 30 8.8
AY430028-1|AAR38775.1| 106|Homo sapiens immunoglobulin heavy ch... 30 8.8
AY392977-1|AAS85916.1| 148|Homo sapiens immunoglobulin heavy ch... 30 8.8
AJ276984-1|CAC81833.1| 129|Homo sapiens immunoglobulin heavy ch... 30 8.8
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 30 8.8
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 30 8.8
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 30 8.8
>DQ100955-1|AAZ08961.1| 119|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 119
Score = 32.7 bits (71), Expect = 1.2
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = +1
Query: 499 AKPTIPNCYIRWPCVR*AEKSMRFCARKSAVLTVALNAWVRPT 627
A +I Y++W ++ ++ M +CAR++ V + ++ W + T
Sbjct: 71 ADKSISTAYLQWSSLKTSDSGMYYCARRTTVPSAGMDVWGQGT 113
>AF343401-1|AAK51398.1| 106|Homo sapiens psoriasis vulgaris
immunoglobulin heavy chain protein.
Length = 106
Score = 32.7 bits (71), Expect = 1.2
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVLTVALNAWVRPTW 630
+ A +I Y++W ++ ++ +M +CAR S+ ++ W + TW
Sbjct: 59 ISADKSISTAYLQWSSLKASDTAMYYCARHSSYSQWLVDYWGQGTW 104
>AY941958-1|AAY33307.1| 121|Homo sapiens anti-rabies virus
immunoglobulin heavy chain variable region protein.
Length = 121
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVL-TVALNAWVRPT 627
+ A +I Y++W ++ ++ +M FCAR+ AV T A + W + T
Sbjct: 70 ISADKSISTAYLQWSSLKASDTAMYFCARRIAVAGTDAFDIWGQGT 115
>AY941920-1|AAY33269.1| 121|Homo sapiens anti-rabies virus
immunoglobulin heavy chain variable region protein.
Length = 121
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVL-TVALNAWVRPT 627
+ A +I Y++W +R ++ +M +CAR+ AV T A + W + T
Sbjct: 70 ISADKSISTAYLQWSSLRASDTAMYYCARRLAVAGTDAFDIWGQGT 115
>AY392970-1|AAS85909.1| 144|Homo sapiens immunoglobulin heavy chain
protein.
Length = 144
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVLTVALNAWVRPTWYLAATMCPT 657
+ A +I Y++W ++ ++ +M +CAR+S L+ W + T ++ PT
Sbjct: 81 ISADNSISTVYLQWSSLKASDTAMYYCARRSEYTGHDLDYWGQGTQVTVSSASPT 135
>AY392963-1|AAS85902.1| 147|Homo sapiens immunoglobulin heavy chain
protein.
Length = 147
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 508 TIPNCYIRWPCVR*AEKSMRFCARKSAVLTVALNA---WVRPTWYLAATMCPT 657
+I Y++W ++ ++ +M +CAR+ V V+ +A W R T ++ PT
Sbjct: 86 SISTAYLQWSSLKASDTAMYYCARQLVVAAVSYDAFDLWGRGTLVTVSSASPT 138
>AF460393-1|AAM87764.1| 63|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 63
Score = 31.5 bits (68), Expect = 2.9
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVLTVALNAW 615
+ A +I Y++W ++ ++ +M +CAR ++T L+ W
Sbjct: 21 ISADKSISTAYLQWSSLKASDTAMYYCARHQGLITGDLDYW 61
>DQ454453-1|ABE66537.1| 85|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 85
Score = 31.1 bits (67), Expect = 3.8
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVLTVALNAWVRPT 627
+ A +I Y++W ++ ++ +M +CAR A+ + A + W + T
Sbjct: 35 ISADKSISTAYLQWSSLKASDTAMYYCARLRALRSSAFDIWGQGT 79
>AY941987-1|AAY33335.1| 121|Homo sapiens anti-rabies virus
immunoglobulin heavy chain variable region protein.
Length = 121
Score = 31.1 bits (67), Expect = 3.8
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVL-TVALNAWVRPT 627
+ A +I Y++W ++ ++ +M FCAR+ AV T A + W + T
Sbjct: 70 ISADKSISTAYLQWSGLKASDTAMYFCARRIAVAGTDAFDIWGQGT 115
>AY392969-1|AAS85908.1| 144|Homo sapiens immunoglobulin heavy chain
protein.
Length = 144
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 523 YIRWPCVR*AEKSMRFCARKSAVLTVALNAWVRPTWYLAATMCPT 657
Y++W ++ ++ +M FCAR+SA + W + T ++ PT
Sbjct: 91 YLQWSSLKASDTAMYFCARQSAYSYGLFDYWGQGTLVTVSSASPT 135
>AF209897-1|AAF40165.1| 106|Homo sapiens immunoglobulin heavy chain
variable region 194-31 protein.
Length = 106
Score = 31.1 bits (67), Expect = 3.8
Identities = 11/46 (23%), Positives = 26/46 (56%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVLTVALNAWVRPTW 630
+ A +I Y++W ++ ++ ++ +CAR S+ ++ W + TW
Sbjct: 59 ISADKSISTAYLQWSSLKASDTAIYYCARHSSFSQWLVDYWGQGTW 104
>Y12038-1|CAA72769.1| 90|Homo sapiens immunoglobulin heavy chain
protein.
Length = 90
Score = 30.7 bits (66), Expect = 5.0
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVLTVALNAW 615
+ A +I Y++W ++ ++ +M +CAR V T ++ W
Sbjct: 50 ISADKSISTAYLQWSSLKASDTAMYYCARHGRVDTAMVSLW 90
>AY941879-1|AAY33228.1| 121|Homo sapiens anti-rabies virus
immunoglobulin heavy chain variable region protein.
Length = 121
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVL-TVALNAWVRPT 627
+ A +I Y++W ++ ++ +M +CAR+ AV T A + W + T
Sbjct: 70 ISADKSISTAYLQWSSLKASDTAMYYCARRIAVAGTDAFDIWGQGT 115
>AY941877-1|AAY33226.1| 121|Homo sapiens anti-rabies virus
immunoglobulin heavy chain variable region protein.
Length = 121
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVL-TVALNAWVRPT 627
+ A +I Y++W ++ ++ +M +CAR+ AV T A + W + T
Sbjct: 70 ISADKSISTAYLQWSSLKASDTAMYYCARRIAVAGTDAFDIWGQGT 115
>AY429735-1|AAR38515.1| 90|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 90
Score = 30.7 bits (66), Expect = 5.0
Identities = 10/41 (24%), Positives = 24/41 (58%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVLTVALNAW 615
+ A +I Y++W ++ ++ +M +CAR+ + + A + W
Sbjct: 50 ISADKSISTAYLQWSSLKASDTAMYYCARRDSSSSFAFDIW 90
>AF460501-1|AAM87872.1| 72|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 72
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKS----AVLTVALNAWVRPTW 630
+ A +I Y++W ++ ++ +M +CAR V+ A+N W W
Sbjct: 21 ISANKSISTAYLQWSSLKASDTAMYYCARSGRKDIVVVPAAINNWYFDLW 70
>AY941923-1|AAY33272.1| 121|Homo sapiens anti-rabies virus
immunoglobulin heavy chain variable region protein.
Length = 121
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 508 TIPNCYIRWPCVR*AEKSMRFCARKSAVL-TVALNAWVRPT 627
+I Y++W ++ ++ SM +CAR+ AV T A + W + T
Sbjct: 75 SISTAYLQWSSLQASDTSMYYCARRIAVAGTDAFDIWGQGT 115
>AY640519-1|AAT65122.1| 120|Homo sapiens immunoglobulin E variable
region protein.
Length = 120
Score = 30.3 bits (65), Expect = 6.6
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVLTVALNAWVRPT 627
+ A +I Y++W ++ ++ +M +CARK A + W + T
Sbjct: 70 ISADTSISTAYLQWSSLKASDTAMYYCARKGVTPWDAFDIWDQGT 114
>AF460646-1|AAM88017.1| 63|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 63
Score = 30.3 bits (65), Expect = 6.6
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVLTVALNAW 615
+ A +I Y++W ++ ++ +M +CAR AV + ++ W
Sbjct: 21 ISADKSISTAYLQWSSLKASDTAMYYCARPGAVDSSPIDYW 61
>AB067074-1|BAC02112.1| 120|Homo sapiens immunoglobulin heavy chain
VHDJ region protein.
Length = 120
Score = 30.3 bits (65), Expect = 6.6
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVLTVALNAWVRPT 627
+ A +I Y++W ++ ++ +M +C R +T L +W + T
Sbjct: 70 ISADKSISTAYLQWTSLKASDTAMYYCVRSQDTVTDPLESWGQGT 114
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 348 WPRPTKKLYILPMRW*PPTPDWCKLTQC*TRRAAKRRTGQP 470
WPRP + + P R PP P W + RR+ R P
Sbjct: 242 WPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSP 282
>DQ065698-1|ABA00108.1| 121|Homo sapiens immunoglobulin epsilon
heavy chain variable region protein.
Length = 121
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVL-TVALNAWVRPT 627
+ A +I Y++W ++ ++ +M FCAR+ V T A + W + T
Sbjct: 70 ISADESISTAYLQWSSLKASDTAMYFCARRIPVAGTDAFHIWGQGT 115
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 348 WPRPTKKLYILPMRW*PPTPDWCKLTQC*TRRAAKRRTGQP 470
WPRP + + P R PP P W + RR+ R P
Sbjct: 242 WPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSP 282
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 348 WPRPTKKLYILPMRW*PPTPDWCKLTQC*TRRAAKRRTGQP 470
WPRP + + P R PP P W + RR+ R P
Sbjct: 242 WPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSP 282
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 348 WPRPTKKLYILPMRW*PPTPDWCKLTQC*TRRAAKRRTGQP 470
WPRP + + P R PP P W + RR+ R P
Sbjct: 242 WPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSP 282
>AY430028-1|AAR38775.1| 106|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 106
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVLTV 600
+ A +I Y++W ++ ++ +M +CAR+ VL V
Sbjct: 57 ISADKSISTAYLQWSSLKASDTAMYYCARRDIVLMV 92
>AY392977-1|AAS85916.1| 148|Homo sapiens immunoglobulin heavy chain
protein.
Length = 148
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARK----SAVLTVALNAWVRPTWYLAATMCPT 657
+ A +I Y++W ++ ++ + FCAR+ +A++ ++AW + T ++ PT
Sbjct: 81 ISADKSINTAYLQWTSLKASDTGIYFCARRGGGPAALVYNGMDAWGKGTTVTVSSASPT 139
>AJ276984-1|CAC81833.1| 129|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 129
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/58 (24%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +1
Query: 493 VIAKPTIPNCYIRWPCVR*AEKSMRFCARKSAVLTV---ALNAWVRPTWYLAATMCPT 657
V A +I Y++W ++ ++ +M +CAR++ + T+ + + W + T ++ PT
Sbjct: 51 VSADKSISTAYLQWSSLKASDTAMYYCARQADMATLRGGSSDIWGQGTMVTVSSASPT 108
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 348 WPRPTKKLYILPMRW*PPTPDWCKLTQC*TRRAAKRRTGQP 470
WPRP + + P R PP P W + RR+ R P
Sbjct: 219 WPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSP 259
>AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2
protein.
Length = 228
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 348 WPRPTKKLYILPMRW*PPTPDWCKLTQC*TRRAAKRRTGQP 470
WPRP + + P R PP P W + RR+ R P
Sbjct: 165 WPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSP 205
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 348 WPRPTKKLYILPMRW*PPTPDWCKLTQC*TRRAAKRRTGQP 470
WPRP + + P R PP P W + RR+ R P
Sbjct: 242 WPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSP 282
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,323,193
Number of Sequences: 237096
Number of extensions: 2356561
Number of successful extensions: 5934
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 5720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5934
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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