Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120408.Seq
         (680 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1591|AAF52734.1|  275|Drosophila melanogaster CG9555-PA...    30   2.5  
BT021312-1|AAX33460.1| 1215|Drosophila melanogaster RE14947p pro...    30   3.4  
AE014134-2679|AAN10933.1| 1170|Drosophila melanogaster CG12455-P...    30   3.4  
AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-P...    30   3.4  
AY071461-1|AAL49083.1|  691|Drosophila melanogaster RE54096p pro...    29   7.8  
AE014296-3713|AAF51857.2|  680|Drosophila melanogaster CG7369-PA...    29   7.8  

>AE014134-1591|AAF52734.1|  275|Drosophila melanogaster CG9555-PA
           protein.
          Length = 275

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 194 LLFIISWITPSLVMSTVCGC 135
           + FI+ W  P L + TVCGC
Sbjct: 210 IYFILDWERPGLAIGTVCGC 229


>BT021312-1|AAX33460.1| 1215|Drosophila melanogaster RE14947p
           protein.
          Length = 1215

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 281 KMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANA 406
           KM+ NY  I+    +  F  +S  E  E I+H  NA+V   A
Sbjct: 586 KMNPNYNSIDFTEVEHLFEDQSPREPGESILHIRNAMVRHEA 627


>AE014134-2679|AAN10933.1| 1170|Drosophila melanogaster CG12455-PB,
           isoform B protein.
          Length = 1170

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 281 KMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANA 406
           KM+ NY  I+    +  F  +S  E  E I+H  NA+V   A
Sbjct: 541 KMNPNYNSIDFTEVEHLFEDQSPREPGESILHIRNAMVRHEA 582


>AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-PA,
           isoform A protein.
          Length = 2190

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 281 KMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANA 406
           KM+ NY  I+    +  F  +S  E  E I+H  NA+V   A
Sbjct: 548 KMNPNYNSIDFTEVEHLFEDQSPREPGESILHIRNAMVRHEA 589


>AY071461-1|AAL49083.1|  691|Drosophila melanogaster RE54096p
           protein.
          Length = 691

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = -3

Query: 171 NTLLGDEHCVRLQVQWVTLLDHVVWSRGIWYRPRLAVRRFVFFVN 37
           NT    +HC+RL  +W+ +  +      +  + R+  R+ V+  N
Sbjct: 226 NTQRSAQHCIRLLSEWIEIFPYDFRDERLMQQVRILARKCVYIDN 270


>AE014296-3713|AAF51857.2|  680|Drosophila melanogaster CG7369-PA
           protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = -3

Query: 171 NTLLGDEHCVRLQVQWVTLLDHVVWSRGIWYRPRLAVRRFVFFVN 37
           NT    +HC+RL  +W+ +  +      +  + R+  R+ V+  N
Sbjct: 226 NTQRSAQHCIRLLSEWIEIFPYDFRDERLMQQVRILARKCVYIDN 270


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,420,629
Number of Sequences: 53049
Number of extensions: 713750
Number of successful extensions: 1887
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1887
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)