Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120406.Seq
(749 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep: ... 168 1e-40
UniRef50_Q287M2 Cluster: BRO-A; n=1; Agrotis segetum nucleopolyh... 163 3e-39
UniRef50_Q9YML3 Cluster: Uncharacterized Bro-N domain-containing... 123 4e-27
UniRef50_Q287E9 Cluster: BRO-D; n=3; unclassified Nucleopolyhedr... 122 7e-27
UniRef50_P24655 Cluster: Uncharacterized Bro-N domain-containing... 120 4e-26
UniRef50_A1YJ59 Cluster: BRO; n=1; Spodoptera frugiperda MNPV|Re... 95 1e-18
UniRef50_Q0IL61 Cluster: Bro-e; n=1; Leucania separata nuclear p... 89 8e-17
UniRef50_Q06KR1 Cluster: Baculovirus repeated ORF-a; n=6; Nucleo... 84 4e-15
UniRef50_Q8QLL0 Cluster: BRO-b; n=2; Nucleopolyhedrovirus|Rep: B... 80 7e-14
UniRef50_Q99GY7 Cluster: Bro; n=27; root|Rep: Bro - Helicoverpa ... 73 1e-11
UniRef50_Q4KT25 Cluster: BRO-A; n=3; root|Rep: BRO-A - Chrysodei... 68 3e-10
UniRef50_Q9E231 Cluster: Orf60-like protien; n=14; Baculoviridae... 62 2e-08
UniRef50_Q9PYR4 Cluster: ORF131; n=1; Xestia c-nigrum granulovir... 60 4e-08
UniRef50_O55569 Cluster: P20; n=5; Nucleopolyhedrovirus|Rep: P20... 54 3e-06
UniRef50_Q8QLB1 Cluster: BRO-g; n=3; Nucleopolyhedrovirus|Rep: B... 52 1e-05
UniRef50_Q4KT11 Cluster: BRO-B; n=2; Nucleopolyhedrovirus|Rep: B... 49 1e-04
UniRef50_A4KXK3 Cluster: Bro17; n=2; Heliothis virescens ascovir... 49 1e-04
UniRef50_Q8QLB2 Cluster: BRO-f; n=4; Nucleopolyhedrovirus|Rep: B... 47 4e-04
UniRef50_A3HNE6 Cluster: BRO domain protein domain protein; n=1;... 47 6e-04
UniRef50_Q8QLL3 Cluster: BRO-a; n=1; Mamestra configurata NPV-A|... 46 0.001
UniRef50_Q80LR2 Cluster: Baculovirus repeated ORF; n=1; Adoxophy... 46 0.001
UniRef50_Q3Y2L0 Cluster: BRO, N-terminal; n=1; Enterococcus faec... 46 0.001
UniRef50_A4XBY6 Cluster: BRO domain protein domain protein; n=2;... 46 0.001
UniRef50_Q0IKW6 Cluster: Bro-i; n=3; dsDNA viruses, no RNA stage... 44 0.003
UniRef50_Q2L2E4 Cluster: Phage protein; n=1; Bordetella avium 19... 44 0.003
UniRef50_A5IZW6 Cluster: Bro-5; n=2; Spodoptera litura granulovi... 44 0.005
UniRef50_Q9PYR5 Cluster: ORF130; n=1; Xestia c-nigrum granulovir... 43 0.007
UniRef50_Q919G9 Cluster: CUN108 putative bro protein, ATP_GTP_A ... 43 0.009
UniRef50_Q06KD3 Cluster: Baculovirus repeated ORF; n=1; Anticars... 42 0.012
UniRef50_Q0I4I5 Cluster: Putative uncharacterized protein; n=2; ... 42 0.012
UniRef50_A7LYR8 Cluster: Putative uncharacterized protein; n=2; ... 42 0.012
UniRef50_A5MYH6 Cluster: Predicted prophage antirepressor; n=1; ... 42 0.012
UniRef50_Q9YML4 Cluster: Ld-bro-i; n=1; Lymantria dispar MNPV|Re... 42 0.016
UniRef50_A5IZL9 Cluster: Bro-1; n=1; Spodoptera litura granulovi... 42 0.016
UniRef50_Q47HX8 Cluster: BRO, N-terminal; n=1; Dechloromonas aro... 42 0.016
UniRef50_A6PK75 Cluster: BRO domain protein; n=1; Victivallis va... 42 0.016
UniRef50_Q5UP77 Cluster: Uncharacterized Bro-N domain-containing... 42 0.016
UniRef50_Q7N339 Cluster: Similar to bacteriophage protein; n=2; ... 42 0.021
UniRef50_Q1J4V4 Cluster: Phage antirepressor protein; n=1; Strep... 42 0.021
UniRef50_A6LVQ3 Cluster: Prophage antirepressor; n=3; root|Rep: ... 42 0.021
UniRef50_Q185G9 Cluster: Putative phage-related regulatory prote... 41 0.028
UniRef50_A4P0J2 Cluster: Possible prophage antirepressor; n=1; H... 41 0.028
UniRef50_A0RLT8 Cluster: Antirepressor, phage associated; n=3; B... 41 0.028
UniRef50_A0A7D8 Cluster: Prophage antirepressor; n=1; Cyanophage... 41 0.028
UniRef50_A5IZQ5 Cluster: Bro-2; n=1; Spodoptera litura granulovi... 41 0.037
UniRef50_A4TYQ8 Cluster: BRO, N-terminal; n=1; Magnetospirillum ... 40 0.049
UniRef50_A3QSE3 Cluster: Putative antirepressor; n=1; Clostridiu... 40 0.049
UniRef50_P44189 Cluster: Uncharacterized protein HI1418; n=8; Pa... 40 0.049
UniRef50_Q919R4 Cluster: CUN001 putative bro protein, ATP_GTP_A ... 40 0.065
UniRef50_A4KXK8 Cluster: Bro20; n=1; Heliothis virescens ascovir... 40 0.065
UniRef50_Q92FM4 Cluster: Lin0080 protein; n=14; root|Rep: Lin008... 40 0.065
UniRef50_Q30XK5 Cluster: Prophage antirepressor-like; n=2; Desul... 40 0.065
UniRef50_A7A2N3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.065
UniRef50_Q9YVP8 Cluster: ORF MSV194 ALI motif gene family protei... 40 0.086
UniRef50_Q9PAJ2 Cluster: Phage-related protein; n=22; Gammaprote... 40 0.086
UniRef50_Q3J623 Cluster: Putative uncharacterized protein; n=1; ... 40 0.086
UniRef50_Q03FD4 Cluster: Uncharacterized phage-encoded protein; ... 40 0.086
UniRef50_A1AN22 Cluster: BRO domain protein domain protein; n=1;... 40 0.086
UniRef50_A6N1W8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.086
UniRef50_Q9YMQ6 Cluster: Ld-bro-c; n=6; dsDNA viruses, no RNA st... 39 0.11
UniRef50_Q8D9R6 Cluster: Prophage antirepressor; n=1; Vibrio vul... 39 0.11
UniRef50_Q65PV1 Cluster: Lj965 prophage antirepressor; n=4; root... 39 0.11
UniRef50_A6NXW4 Cluster: Putative uncharacterized protein; n=1; ... 39 0.11
UniRef50_A6NWY1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.11
UniRef50_A5I4G4 Cluster: BRO family protein; n=1; Clostridium bo... 39 0.11
UniRef50_A3VVX0 Cluster: Hypothetical BRO family protein; n=1; R... 39 0.11
UniRef50_Q7Y4K9 Cluster: Gp15; n=9; root|Rep: Gp15 - Streptococc... 39 0.11
UniRef50_UPI0000397D5D Cluster: COG3617: Prophage antirepressor;... 39 0.15
UniRef50_A4KX99 Cluster: Bro6; n=1; Heliothis virescens ascoviru... 39 0.15
UniRef50_Q8FRD3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.15
UniRef50_Q6NK48 Cluster: Putative anti-repressor protein; n=3; C... 39 0.15
UniRef50_Q5F6A8 Cluster: Putative uncharacterized protein; n=2; ... 39 0.15
UniRef50_A6TLJ8 Cluster: Prophage antirepressor; n=5; root|Rep: ... 39 0.15
UniRef50_A3DI85 Cluster: BRO-like protein; n=1; Clostridium ther... 39 0.15
UniRef50_Q9PYY1 Cluster: ORF62; n=1; Xestia c-nigrum granuloviru... 38 0.20
UniRef50_Q8QNG2 Cluster: EsV-1-117; n=1; Ectocarpus siliculosus ... 38 0.20
UniRef50_Q8G2Q7 Cluster: BRO family protein; n=3; Brucella|Rep: ... 38 0.20
UniRef50_Q84IK9 Cluster: Antirepressor protein; n=1; Clostridium... 38 0.26
UniRef50_Q0SWM4 Cluster: BRO family, N-terminal domain protein; ... 38 0.26
UniRef50_Q8W644 Cluster: Putative uncharacterized protein; n=2; ... 38 0.26
UniRef50_Q1A0E0 Cluster: Gp77; n=1; Mycobacterium phage Che12|Re... 37 0.46
UniRef50_A5YK15 Cluster: Gp47; n=3; unclassified Siphoviridae|Re... 37 0.46
UniRef50_A4KXE7 Cluster: Bro9; n=1; Heliothis virescens ascoviru... 37 0.61
UniRef50_Q47D43 Cluster: BRO family protein; n=1; Dechloromonas ... 37 0.61
UniRef50_A3DG82 Cluster: BRO-like protein; n=1; Clostridium ther... 37 0.61
UniRef50_Q91FW9 Cluster: 201R; n=2; Invertebrate iridescent viru... 36 0.81
UniRef50_Q5L2M6 Cluster: Phage associated-antirepressor; n=4; ro... 36 0.81
UniRef50_Q8JM96 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q4KT10 Cluster: BRO-C; n=1; Chrysodeixis chalcites nucl... 36 1.1
UniRef50_A3M6B7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_A3DFZ3 Cluster: BRO-like protein; n=1; Clostridium ther... 36 1.1
UniRef50_A0VJ08 Cluster: BRO-like; n=1; Delftia acidovorans SPH-... 36 1.1
UniRef50_A7IY79 Cluster: Putative antirepressor; n=1; Corynebact... 36 1.1
UniRef50_Q0IL00 Cluster: Bro-f; n=1; Leucania separata nuclear p... 36 1.4
UniRef50_Q6AC67 Cluster: Prophage antirepressor protein; n=2; Le... 36 1.4
UniRef50_A7NAQ8 Cluster: Two-component response regulator; n=10;... 36 1.4
UniRef50_A3X9C1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_A0QB24 Cluster: Gp54 protein; n=2; Mycobacterium avium ... 36 1.4
UniRef50_Q91BW9 Cluster: Bro-a; n=3; Nucleopolyhedrovirus|Rep: B... 35 1.9
UniRef50_Q197E1 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_A6R9I8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_Q9YVP6 Cluster: ORF MSV196 ALI motif gene family protei... 34 3.3
UniRef50_Q4ZAE4 Cluster: ORF018; n=4; Staphylococcus phage 53 se... 34 3.3
UniRef50_Q9YVP7 Cluster: ORF MSV195 ALI motif gene family protei... 34 4.3
UniRef50_Q8YHA3 Cluster: PHAGE-RELATED DNA BINDING PROTEIN; n=4;... 34 4.3
UniRef50_Q6NEV9 Cluster: Putative DNA-binding bacteriophage prot... 34 4.3
UniRef50_Q3JTQ5 Cluster: BRO family, N-terminal domain protein; ... 34 4.3
UniRef50_Q3R2M5 Cluster: BRO, N-terminal; n=8; Xylella fastidios... 34 4.3
UniRef50_Q8SDX0 Cluster: Anti-repressor; n=19; root|Rep: Anti-re... 34 4.3
UniRef50_Q1GJ26 Cluster: Putative uncharacterized protein; n=2; ... 33 5.7
UniRef50_A3DLS5 Cluster: CopG domain protein DNA-binding domain ... 33 5.7
UniRef50_Q06VQ4 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_A5ZCZ9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q55YG4 Cluster: Putative uncharacterized protein; n=2; ... 33 7.5
UniRef50_Q65943 Cluster: E1B protein, large T-antigen; n=3; Cani... 33 7.5
UniRef50_Q4J4T0 Cluster: Putative uncharacterized protein; n=1; ... 33 9.9
UniRef50_A1FKV6 Cluster: BRO-like; n=1; Pseudomonas putida W619|... 33 9.9
UniRef50_Q53J66 Cluster: Retrotransposon protein, putative, Ty3-... 33 9.9
>UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep:
BRO-B - Clanis bilineata nucleopolyhedrosis virus
Length = 339
Score = 168 bits (408), Expect = 1e-40
Identities = 96/172 (55%), Positives = 114/172 (66%), Gaps = 16/172 (9%)
Frame = +2
Query: 281 QGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDT 460
+GD LYL PHT+LITK GVIQLIMKSKLPYA+ELQ WLLEEVIPQVLCTGKYAPAVEMDT
Sbjct: 76 KGDSLYLQPHTILITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQVLCTGKYAPAVEMDT 135
Query: 461 N-----------DVIAKIDDLTQKLTVPTQIWRKQPI----AHFVCQRNDCGSTRR*NGS 595
+ IA+ D+ Q LT +Q + A V N + N +
Sbjct: 136 DIQESKILNTYKQDIAEKDEKIQNLTTVLIETNQQVVKFANALIVANENLITANNNLNVA 195
Query: 596 ARLRKRAPET-AQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLR 748
+ A +T +ANRMADIAQDVIAKPS+PQL HSLAVC +G +++AFLR
Sbjct: 196 NQNLHEANQTIGHMANRMADIAQDVIAKPSDPQLLHSLAVCSLGGDQYAFLR 247
Score = 82.6 bits (195), Expect = 9e-15
Identities = 38/65 (58%), Positives = 52/65 (80%)
Frame = +3
Query: 63 VKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTFEHA 242
VKIG FKFGEDTF LRYV+ + + V+FVAKD+AS+LK+ N ++A++ HVD KYKST+E
Sbjct: 5 VKIGNFKFGEDTFRLRYVV-EREIVKFVAKDVASNLKHQNTKKAVKDHVDEKYKSTYEMG 63
Query: 243 DQIQT 257
++ T
Sbjct: 64 KEVVT 68
>UniRef50_Q287M2 Cluster: BRO-A; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: BRO-A - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 324
Score = 163 bits (397), Expect = 3e-39
Identities = 86/160 (53%), Positives = 112/160 (70%), Gaps = 3/160 (1%)
Frame = +2
Query: 278 KQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMD 457
K+G PL+L+ T+LITKSGVIQLIMKSKLPYA+ELQEWLLEEVIPQVLCTGKY PAV +
Sbjct: 91 KKGHPLFLYDQTILITKSGVIQLIMKSKLPYAVELQEWLLEEVIPQVLCTGKYQPAV-AN 149
Query: 458 TNDVIAKIDDLTQKLTVPTQIWRKQP---IAHFVCQRNDCGSTRR*NGSARLRKRAPETA 628
++ ++K +++ K++ + ++ I + R D + RR +
Sbjct: 150 NSECLSKSNEMILKMSQELILAKQNSDAMIQEMIVARRDAETARR------------DMV 197
Query: 629 QLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLR 748
L+ R+ADIAQDVI KPSNPQL H+LAVC++GNNEFAFLR
Sbjct: 198 VLSTRIADIAQDVITKPSNPQLLHTLAVCEIGNNEFAFLR 237
Score = 77.0 bits (181), Expect = 5e-13
Identities = 38/60 (63%), Positives = 43/60 (71%)
Frame = +3
Query: 54 MAQVKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTF 233
M QVKIG FKFGED F LRYV+G+++ V FVAKDIAS LKY A+ HVD KYK F
Sbjct: 1 MPQVKIGVFKFGEDKFKLRYVVGNDKDVLFVAKDIASVLKYEKPANAVAKHVDKKYKCYF 60
>UniRef50_Q9YML3 Cluster: Uncharacterized Bro-N domain-containing
protein J; n=1; Lymantria dispar MNPV|Rep:
Uncharacterized Bro-N domain-containing protein J -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 403
Score = 123 bits (297), Expect = 4e-27
Identities = 61/107 (57%), Positives = 75/107 (70%), Gaps = 5/107 (4%)
Frame = +2
Query: 260 APDSVAKQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 439
A +++AKQGDPLYLHPHTVL+TK GVIQLIMKSKLPYA+ELQ WLLEEVIPQVLCTGKY
Sbjct: 70 ASNALAKQGDPLYLHPHTVLVTKEGVIQLIMKSKLPYAVELQAWLLEEVIPQVLCTGKYD 129
Query: 440 PAVEMDTNDVIAKIDDLTQKLTVPT-----QIWRKQPIAHFVCQRND 565
PA++ + D L + T T + +K+ FV + N+
Sbjct: 130 PAIKHQQEETKRMTDRLIKVFTDHTTTLHAALVKKEKFVEFVVESNN 176
Score = 111 bits (267), Expect = 2e-23
Identities = 49/64 (76%), Positives = 57/64 (89%)
Frame = +3
Query: 54 MAQVKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTF 233
M+QVKIG+FKFG+DTFTLRYVLG EQ V+FVAKDIAS+LK+ NC A+R HVDGKYKSTF
Sbjct: 1 MSQVKIGQFKFGQDTFTLRYVLGGEQQVKFVAKDIASNLKHANCAEAVRKHVDGKYKSTF 60
Query: 234 EHAD 245
EH +
Sbjct: 61 EHGE 64
>UniRef50_Q287E9 Cluster: BRO-D; n=3; unclassified
Nucleopolyhedrovirus|Rep: BRO-D - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 336
Score = 122 bits (295), Expect = 7e-27
Identities = 76/181 (41%), Positives = 103/181 (56%), Gaps = 13/181 (7%)
Frame = +2
Query: 221 QIDV*ACRPNPDHAPDSVA-KQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLL 397
Q D C + + VA K+G+PLYL PHT+LITKSGVIQLIMKSKLPYA+ELQEWLL
Sbjct: 66 QNDAPPCFDDNEGVRGEVAIKKGNPLYLQPHTILITKSGVIQLIMKSKLPYAVELQEWLL 125
Query: 398 EEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLT--------VPTQIWRK-QPIAHF- 547
EEVIPQVLCTGKY PAV+ ++ + +++Q L+ + T I +K Q I
Sbjct: 126 EEVIPQVLCTGKYQPAVDNGNGATVSMLHEISQSLSTIQRDNEQLKTVIVKKDQQIEQTT 185
Query: 548 -VCQRNDCGSTRR*NG-SARLRKRAPETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDV 721
+ R R G ++K+ + + L +M D++ + PSN + L V
Sbjct: 186 RMINRVMADMNRMYTGFQQTMQKKDEQVSSLVEKMVDLSDRAVEYPSNEKKLPILCVMQD 245
Query: 722 G 724
G
Sbjct: 246 G 246
Score = 79.8 bits (188), Expect = 7e-14
Identities = 38/61 (62%), Positives = 45/61 (73%)
Frame = +3
Query: 54 MAQVKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTF 233
MAQVKIG FKFGED F LRYV+ ++ V FV KDIA LKY +C++AI HV+ KYK F
Sbjct: 1 MAQVKIGVFKFGEDEFELRYVVDNDMQVLFVGKDIARVLKYNDCKQAIHKHVNEKYKCVF 60
Query: 234 E 236
E
Sbjct: 61 E 61
>UniRef50_P24655 Cluster: Uncharacterized Bro-N domain-containing
protein ORF2; n=12; Nucleopolyhedrovirus|Rep:
Uncharacterized Bro-N domain-containing protein ORF2 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 328
Score = 120 bits (289), Expect = 4e-26
Identities = 57/75 (76%), Positives = 65/75 (86%), Gaps = 3/75 (4%)
Frame = +2
Query: 266 DSVAKQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPA 445
+SV K+GDPLYL PHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY PA
Sbjct: 72 NSVVKRGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDPA 131
Query: 446 V---EMDTNDVIAKI 481
+ E ++ ++ K+
Sbjct: 132 IKQREEESKQLVTKL 146
Score = 102 bits (245), Expect = 8e-21
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = +3
Query: 54 MAQVKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTF 233
MA+VKIGEFKFGEDTF LRYVL +Q VRFVAKD+A+SLKY C++AIRVHVD KYKS F
Sbjct: 1 MARVKIGEFKFGEDTFNLRYVLERDQQVRFVAKDVANSLKYTVCDKAIRVHVDNKYKSLF 60
Query: 234 EHADQ 248
E Q
Sbjct: 61 EQTIQ 65
>UniRef50_A1YJ59 Cluster: BRO; n=1; Spodoptera frugiperda MNPV|Rep:
BRO - Spodoptera frugiperda nuclear polyhedrosis virus
(SfNPV)
Length = 334
Score = 95.5 bits (227), Expect = 1e-18
Identities = 42/62 (67%), Positives = 49/62 (79%)
Frame = +2
Query: 293 LYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVI 472
LY+HP T++I KSGVIQLIMKSKL YA+ELQEW+ EEVIPQVLCTGKY+P + I
Sbjct: 89 LYVHPQTIMINKSGVIQLIMKSKLSYAVELQEWMFEEVIPQVLCTGKYSPQAALTEEKEI 148
Query: 473 AK 478
K
Sbjct: 149 VK 150
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/60 (58%), Positives = 41/60 (68%)
Frame = +3
Query: 54 MAQVKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTF 233
MA VKI FKFG++ LRYV+GD V FV KDIA+ LKY N ++AI HVD KYK F
Sbjct: 1 MASVKINLFKFGDEEIELRYVIGDNDEVFFVGKDIATMLKYENTKKAIIDHVDDKYKIAF 60
>UniRef50_Q0IL61 Cluster: Bro-e; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: Bro-e - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 354
Score = 89.4 bits (212), Expect = 8e-17
Identities = 49/87 (56%), Positives = 58/87 (66%), Gaps = 4/87 (4%)
Frame = +2
Query: 257 HAPDSVAKQGDP--LYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG 430
H+PD A+ LHP TVLI KSGVIQLIM SKLPYA+ELQEWLLEEVIPQVL TG
Sbjct: 89 HSPDYDAESSSDSETNLHPQTVLINKSGVIQLIMHSKLPYAVELQEWLLEEVIPQVLSTG 148
Query: 431 KYA--PAVEMDTNDVIAKIDDLTQKLT 505
+Y A ND ++ L Q+++
Sbjct: 149 RYVCETAPSKSVNDCQSQTVVLLQEIS 175
Score = 60.1 bits (139), Expect = 6e-08
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = +3
Query: 51 KMAQVKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKST 230
KM V + +FKFG+ T LRY + + V FV +DIA LKY + AI+ HV+ KYK+
Sbjct: 27 KMCTVVVRDFKFGDITMRLRYTIDQDNCVWFVGRDIAKLLKYQRTQDAIKKHVNVKYKAL 86
Query: 231 FEHA 242
+H+
Sbjct: 87 IKHS 90
>UniRef50_Q06KR1 Cluster: Baculovirus repeated ORF-a; n=6;
Nucleopolyhedrovirus|Rep: Baculovirus repeated ORF-a -
Anticarsia gemmatalis nuclear polyhedrosis virus
(AgMNPV)
Length = 243
Score = 83.8 bits (198), Expect = 4e-15
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +3
Query: 54 MAQVKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTF 233
MAQVKIG+FKFGEDTFTLRYVL D+ V+FVAKDIASSL Y A++ +VD KYKST+
Sbjct: 1 MAQVKIGQFKFGEDTFTLRYVL-DKDIVKFVAKDIASSLGYEKFSNAVKKYVDIKYKSTY 59
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +2
Query: 278 KQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVL 421
K+GD LYL PHT+L++ GV+QLI +SK+P A E Q+W + V+P L
Sbjct: 69 KRGDLLYLQPHTILLSNIGVLQLISRSKMPNAAEFQDWFYDHVLPACL 116
>UniRef50_Q8QLL0 Cluster: BRO-b; n=2; Nucleopolyhedrovirus|Rep:
BRO-b - Mamestra configurata NPV-A
Length = 372
Score = 79.8 bits (188), Expect = 7e-14
Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 26/169 (15%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY-----APA--------VEMDT 460
I ++G+ +LI SK+P A E + W+ +++ ++ TG+Y APA + T
Sbjct: 120 INRAGLFELIQASKMPKAQEFRNWINSDLLVKLCDTGEYHMQTDAPADITEGMNVIHSVT 179
Query: 461 NDV-----IAKIDDLTQKLTVPTQI--WRKQPIAHFVCQRNDCGSTRR*NGSARLR---- 607
ND I + +L Q + + QI + + + L+
Sbjct: 180 NDGKEAPWIKDLSELKQIVALKDQIIAMKDEENKKLTVNLQEANQNLTVANQGLLQAFNI 239
Query: 608 --KRAPETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLR 748
+ +TA+LANRMADIAQDVIAKP+NPQL HSLAVC +G +++AF+R
Sbjct: 240 VNEARKDTAELANRMADIAQDVIAKPANPQLLHSLAVCSMGGDQYAFVR 288
>UniRef50_Q99GY7 Cluster: Bro; n=27; root|Rep: Bro - Helicoverpa
armigera nucleopolyhedrovirus G4
Length = 527
Score = 72.5 bits (170), Expect = 1e-11
Identities = 32/43 (74%), Positives = 39/43 (90%)
Frame = +2
Query: 620 ETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLR 748
ETA++A RMADIAQDVIAKPS+PQL HSLAVC +G +++AFLR
Sbjct: 387 ETAEIAKRMADIAQDVIAKPSDPQLLHSLAVCSMGGDQYAFLR 429
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/55 (32%), Positives = 35/55 (63%)
Frame = +2
Query: 287 DPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVE 451
D + LHP + I ++G+ +LI S++P A E ++W+ +++P++ GKY A +
Sbjct: 250 DDVTLHPMSKFINRAGLFELIQASRMPKAQEFRDWINSDLLPKLCDDGKYDMAAD 304
Score = 33.1 bits (72), Expect = 7.5
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 290 PLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPA 445
P + T I ++GV +LI S +P A Q W +++P + G+Y A
Sbjct: 74 PRNIQAKTKFINRAGVFELINASDMPGAKRFQAWNNNDLLPSLCQEGEYKMA 125
>UniRef50_Q4KT25 Cluster: BRO-A; n=3; root|Rep: BRO-A - Chrysodeixis
chalcites nucleopolyhedrovirus
Length = 517
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +2
Query: 602 LRKRAPETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLR 748
L K LANRMADIAQDVIAKPS+PQL HSLAVC +G ++AF+R
Sbjct: 381 LMKANERIENLANRMADIAQDVIAKPSDPQLLHSLAVCALGEGQYAFVR 429
Score = 46.4 bits (105), Expect = 8e-04
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +2
Query: 299 LHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAP 442
LHP T I K+G+ +LI SK+P A E ++W+ +++P + +Y+P
Sbjct: 116 LHPKTKFINKAGLFELIQNSKMPQAQEFKQWINSDLLPTLCQQREYSP 163
>UniRef50_Q9E231 Cluster: Orf60-like protien; n=14;
Baculoviridae|Rep: Orf60-like protien - Helicoverpa zea
SNPV
Length = 501
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +2
Query: 290 PLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 439
PL P+T+ IT++G+ LIM+SKLP A E Q WL EEV+P++ TGKY+
Sbjct: 77 PLNWQPNTLFITEAGIYALIMRSKLPAAEEFQSWLFEEVLPELRRTGKYS 126
>UniRef50_Q9PYR4 Cluster: ORF131; n=1; Xestia c-nigrum
granulovirus|Rep: ORF131 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 442
Score = 60.5 bits (140), Expect = 4e-08
Identities = 30/65 (46%), Positives = 41/65 (63%)
Frame = +2
Query: 290 PLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDV 469
P P+TV IT++GV LI+KSKLP A + Q+WL EEV+P++ TGKY + T+
Sbjct: 60 PANWQPNTVFITEAGVWALIIKSKLPAAEKFQKWLFEEVLPELRRTGKYDMSEAASTSTE 119
Query: 470 IAKID 484
I D
Sbjct: 120 IVNYD 124
>UniRef50_O55569 Cluster: P20; n=5; Nucleopolyhedrovirus|Rep: P20 -
Leucania separata nuclear polyhedrosis virus (LsNPV)
Length = 179
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +2
Query: 632 LANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLR 748
L+ R+ DI QDV+ KP N QL H+LAVC++ N+FAFLR
Sbjct: 63 LSKRLVDIVQDVVVKPQNCQLLHALAVCELSCNKFAFLR 101
>UniRef50_Q8QLB1 Cluster: BRO-g; n=3; Nucleopolyhedrovirus|Rep:
BRO-g - Mamestra configurata NPV-A
Length = 235
Score = 52.4 bits (120), Expect = 1e-05
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +2
Query: 302 HPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQV 418
HPHTV + K+G++Q+I K KL A +LQ+WL EEV P++
Sbjct: 81 HPHTVSVNKAGLVQMITKCKLKNADKLQKWLYEEVFPKI 119
>UniRef50_Q4KT11 Cluster: BRO-B; n=2; Nucleopolyhedrovirus|Rep:
BRO-B - Chrysodeixis chalcites nucleopolyhedrovirus
Length = 635
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/60 (35%), Positives = 37/60 (61%)
Frame = +2
Query: 299 LHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAK 478
LHP T I K+G+ +LI SK+P A E ++W+ +++P++ G+Y V++ N+ K
Sbjct: 74 LHPKTKFINKAGLFELIQNSKMPKAQEFKQWINFDLLPKLCDKGRYDMQVDVLANNCAQK 133
>UniRef50_A4KXK3 Cluster: Bro17; n=2; Heliothis virescens ascovirus
3e|Rep: Bro17 - Heliothis virescens ascovirus 3e
Length = 502
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +2
Query: 290 PLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
P P+TV IT+ + +L KS LP A E Q+W+ EEV+P + TG Y
Sbjct: 79 PANWQPNTVFITEPAIYKLCTKSTLPEAEEFQDWIYEEVLPTIRRTGGY 127
>UniRef50_Q8QLB2 Cluster: BRO-f; n=4; Nucleopolyhedrovirus|Rep:
BRO-f - Mamestra configurata NPV-A
Length = 357
Score = 47.2 bits (107), Expect = 4e-04
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Frame = +2
Query: 257 HAPDSVAKQGDPLYLHPHTVLITKSGVIQLIMKSKLP-YAIE-LQEWLLEEVIPQVLCTG 430
H P++ +G HPHTV + + G+ Q+I+ SKL +E ++W+ EEV+P + TG
Sbjct: 67 HVPET---KGITSSTHPHTVFVNEPGLYQMILSSKLKNNRVEPFKKWVFEEVLPTIRKTG 123
Query: 431 KY---APAVEMDTNDV--IAKIDDLTQKL 502
+Y A + NDV +A + ++Q +
Sbjct: 124 QYKMDTAAAPTNGNDVNTVALLQTISQNI 152
>UniRef50_A3HNE6 Cluster: BRO domain protein domain protein; n=1;
Pseudomonas putida GB-1|Rep: BRO domain protein domain
protein - Pseudomonas putida (strain GB-1)
Length = 285
Score = 46.8 bits (106), Expect = 6e-04
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +2
Query: 287 DPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY-APAVEMD 457
D L P +I + V +L+M+SK+P A +EW++ EV+P + TG Y APA D
Sbjct: 79 DSFTLGPSANIIPERDVYRLVMRSKMPQAERFEEWVVSEVLPSIRKTGGYTAPAQPAD 136
Score = 32.7 bits (71), Expect = 9.9
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 84 FGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVH 206
F + F +R VL D +P F A+D+A L Y N ++A+R H
Sbjct: 29 FNFEGFDVRVVLVDGEPW-FSARDVAEGLGYSNPQKAVRDH 68
>UniRef50_Q8QLL3 Cluster: BRO-a; n=1; Mamestra configurata
NPV-A|Rep: BRO-a - Mamestra configurata NPV-A
Length = 161
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +2
Query: 248 NPDHAPDSVAKQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEV 406
N ++AP + P + H +TV I ++GV+ LIM S++ YA E ++W EE+
Sbjct: 12 NMENAPKPRNMENAPKHWHSNTVFIDEAGVMSLIMNSEISYAKEFKKWFYEEL 64
>UniRef50_Q80LR2 Cluster: Baculovirus repeated ORF; n=1; Adoxophyes
honmai NPV|Rep: Baculovirus repeated ORF - Adoxophyes
honmai nucleopolyhedrovirus
Length = 113
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/30 (60%), Positives = 27/30 (90%)
Frame = +3
Query: 144 VAKDIASSLKYVNCERAIRVHVDGKYKSTF 233
+AKD+A++LKYV+C++AIR++VD KYK F
Sbjct: 1 MAKDVAAALKYVDCKQAIRINVDEKYKCKF 30
>UniRef50_Q3Y2L0 Cluster: BRO, N-terminal; n=1; Enterococcus faecium
DO|Rep: BRO, N-terminal - Enterococcus faecium DO
Length = 248
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 254 DHAPDSVAKQG-DPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG 430
DH S+ G D L +I +S V +LI+KS LP A + + W++EEV+P + TG
Sbjct: 45 DHCKKSIETWGNDSLGRRQKFKVIPESDVYRLIIKSNLPSAEKFEAWVMEEVLPTIRKTG 104
Query: 431 KYA 439
Y+
Sbjct: 105 SYS 107
>UniRef50_A4XBY6 Cluster: BRO domain protein domain protein; n=2;
Salinispora|Rep: BRO domain protein domain protein -
Salinispora tropica CNB-440
Length = 284
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +2
Query: 257 HAPD-SVAKQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGK 433
HA D S A+ D + H + +SG+ LI +S+ P A + W+ EV+P + TG+
Sbjct: 68 HADDLSTAEVIDGMGRRQHVRITNESGLYDLIFQSRKPEARAFRRWVTHEVLPAIRATGR 127
Query: 434 Y--APAVEMDTNDVIAKIDDLTQKL 502
Y PAV D + D ++L
Sbjct: 128 YESVPAVPQSYADALQLAADQARQL 152
>UniRef50_Q0IKW6 Cluster: Bro-i; n=3; dsDNA viruses, no RNA
stage|Rep: Bro-i - Leucania separata nuclear
polyhedrosis virus (LsNPV)
Length = 263
Score = 44.4 bits (100), Expect = 0.003
Identities = 16/40 (40%), Positives = 29/40 (72%)
Frame = +2
Query: 299 LHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQV 418
LHP + I K+G+++L++KS++ YA E + WL+ E+ P +
Sbjct: 96 LHPSSRFINKAGLLELVLKSRMRYAAEFRFWLVNELFPSL 135
>UniRef50_Q2L2E4 Cluster: Phage protein; n=1; Bordetella avium
197N|Rep: Phage protein - Bordetella avium (strain 197N)
Length = 374
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 314 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAP-AVEMDTNDVIAK 478
V+I +SG+ L+++S+ P A + +W+ EV+PQ+ TG Y P ++ D++ K
Sbjct: 135 VIINESGLYALVLRSRKPEARKFAKWVTSEVLPQIRKTGAYLPKEFAVNPGDILTK 190
>UniRef50_A5IZW6 Cluster: Bro-5; n=2; Spodoptera litura
granulovirus|Rep: Bro-5 - Spodoptera litura granulovirus
Length = 256
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +2
Query: 290 PLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGK 433
P P+TV I+++GV LIM+ KL A ++WL EEV+P++ G+
Sbjct: 75 PANWQPNTVFISEAGVYALIMRCKLHTADLFRQWLFEEVLPELRKNGR 122
>UniRef50_Q9PYR5 Cluster: ORF130; n=1; Xestia c-nigrum
granulovirus|Rep: ORF130 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 237
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 290 PLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQV 418
P P+TV IT++GV LI KSKL A +EWL + +IPQ+
Sbjct: 51 PSNWQPNTVFITEAGVYALINKSKLAGAEIFREWLFDTIIPQM 93
>UniRef50_Q919G9 Cluster: CUN108 putative bro protein, ATP_GTP_A
motif, similar to AcMNPV ORF2; n=1; Culex nigripalpus
NPV|Rep: CUN108 putative bro protein, ATP_GTP_A motif,
similar to AcMNPV ORF2 - Culex nigripalpus NPV
Length = 601
Score = 42.7 bits (96), Expect = 0.009
Identities = 17/48 (35%), Positives = 32/48 (66%)
Frame = +2
Query: 314 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMD 457
V++ + GV QLI++S+LP A ++W+ V+P + TG+Y +E++
Sbjct: 241 VMLNEGGVQQLILESRLPNAKRYKQWVCGTVLPSIRKTGRYERTMELE 288
>UniRef50_Q06KD3 Cluster: Baculovirus repeated ORF; n=1; Anticarsia
gemmatalis nucleopolyhedrovirus|Rep: Baculovirus
repeated ORF - Anticarsia gemmatalis nuclear
polyhedrosis virus (AgMNPV)
Length = 60
Score = 42.3 bits (95), Expect = 0.012
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2
Query: 260 APDSVAKQGDPLYLHPHTVLITK 328
A D+VAKQ DPLYL PHT+LITK
Sbjct: 32 AADTVAKQRDPLYLQPHTILITK 54
>UniRef50_Q0I4I5 Cluster: Putative uncharacterized protein; n=2;
Histophilus somni|Rep: Putative uncharacterized protein
- Haemophilus somnus (strain 129Pt) (Histophilus somni
(strain 129Pt))
Length = 204
Score = 42.3 bits (95), Expect = 0.012
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
I + + ++I KS+ A+E Q W+ EEV+PQ+ TGKY
Sbjct: 69 INEPNLYRIIFKSRKAEAVEFQNWVFEEVLPQIRKTGKY 107
>UniRef50_A7LYR8 Cluster: Putative uncharacterized protein; n=2;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 269
Score = 42.3 bits (95), Expect = 0.012
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
I + VI+LIM+SKLP A Q+W+ EE++P + G Y
Sbjct: 78 INEGDVIRLIMRSKLPQAEAFQDWVCEEILPSIRKHGAY 116
>UniRef50_A5MYH6 Cluster: Predicted prophage antirepressor; n=1;
Clostridium kluyveri DSM 555|Rep: Predicted prophage
antirepressor - Clostridium kluyveri DSM 555
Length = 267
Score = 42.3 bits (95), Expect = 0.012
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDT-NDVIAK 478
I + + +L+ S+LP A E + W+ ++V+PQ+ TG Y P E ++ D++AK
Sbjct: 71 IPEGDIYRLVANSELPGAQEFESWIFDKVLPQINHTGGYIPNNEDESEEDILAK 124
>UniRef50_Q9YML4 Cluster: Ld-bro-i; n=1; Lymantria dispar MNPV|Rep:
Ld-bro-i - Lymantria dispar multicapsid nuclear
polyhedrosis virus (LdMNPV)
Length = 346
Score = 41.9 bits (94), Expect = 0.016
Identities = 21/77 (27%), Positives = 40/77 (51%)
Frame = +2
Query: 272 VAKQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVE 451
VA P HP T+ + + GV L+ +S P A E +++ E ++P + TGK+ +
Sbjct: 77 VAPPTTPANWHPETLFVLEPGVYALLARSNKPLAKERMKFVYETILPTIRKTGKFEMSKT 136
Query: 452 MDTNDVIAKIDDLTQKL 502
D + A++ ++ +L
Sbjct: 137 SDVINYDARMAEMKVEL 153
>UniRef50_A5IZL9 Cluster: Bro-1; n=1; Spodoptera litura
granulovirus|Rep: Bro-1 - Spodoptera litura granulovirus
Length = 471
Score = 41.9 bits (94), Expect = 0.016
Identities = 21/79 (26%), Positives = 44/79 (55%)
Frame = +2
Query: 299 LHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAK 478
LHP++ I ++G+ +LI S +P A + ++W+ +++ ++ TGKY+ T++ A+
Sbjct: 70 LHPYSKFINQAGLFELIQSSCMPKAQQFKDWVTSKLLTRLCKTGKYSM-----TDNAPAQ 124
Query: 479 IDDLTQKLTVPTQIWRKQP 535
I+D + T + P
Sbjct: 125 INDAMNTIHAATNEGTQAP 143
>UniRef50_Q47HX8 Cluster: BRO, N-terminal; n=1; Dechloromonas
aromatica RCB|Rep: BRO, N-terminal - Dechloromonas
aromatica (strain RCB)
Length = 111
Score = 41.9 bits (94), Expect = 0.016
Identities = 16/41 (39%), Positives = 29/41 (70%)
Frame = +2
Query: 314 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
+L+++SG+ +LIM+S P A Q+W+ +EV+P + TG +
Sbjct: 57 ILVSESGLYKLIMRSDKPQAKAFQDWVTKEVLPSIRKTGSF 97
>UniRef50_A6PK75 Cluster: BRO domain protein; n=1; Victivallis
vadensis ATCC BAA-548|Rep: BRO domain protein -
Victivallis vadensis ATCC BAA-548
Length = 357
Score = 41.9 bits (94), Expect = 0.016
Identities = 19/45 (42%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +2
Query: 317 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY-APAV 448
+++++ V++LI SKLP A + + W+ EEV+P + TG Y AP+V
Sbjct: 70 ILSEADVMRLICGSKLPAAQKFERWVFEEVLPAIRRTGSYAAPSV 114
>UniRef50_Q5UP77 Cluster: Uncharacterized Bro-N domain-containing
protein L2; n=1; Acanthamoeba polyphaga mimivirus|Rep:
Uncharacterized Bro-N domain-containing protein L2 -
Mimivirus
Length = 246
Score = 41.9 bits (94), Expect = 0.016
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +2
Query: 290 PLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 439
P L T I SG LI SK P+A+++++WL +EVIP ++ G Y+
Sbjct: 168 PKTLDKKTKFINLSGFCNLIHHSKKPFAMKIKKWLDDEVIPALIMDGVYS 217
>UniRef50_Q7N339 Cluster: Similar to bacteriophage protein; n=2;
Enterobacteriaceae|Rep: Similar to bacteriophage protein
- Photorhabdus luminescens subsp. laumondii
Length = 314
Score = 41.5 bits (93), Expect = 0.021
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = +2
Query: 314 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 439
+L +S + +L+M+S LP A Q+W+ E V+P ++ TG Y+
Sbjct: 139 ILAGQSDMFRLVMRSNLPSAERFQDWVCEAVLPSIMETGSYS 180
>UniRef50_Q1J4V4 Cluster: Phage antirepressor protein; n=1;
Streptococcus pyogenes MGAS10750|Rep: Phage
antirepressor protein - Streptococcus pyogenes serotype
M4 (strain MGAS10750)
Length = 244
Score = 41.5 bits (93), Expect = 0.021
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 317 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTND 466
+I +SG+ LI+ SKLP A + W+ EV+P + G Y E TN+
Sbjct: 70 IINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIVGQEKKTNE 119
>UniRef50_A6LVQ3 Cluster: Prophage antirepressor; n=3; root|Rep:
Prophage antirepressor - Clostridium beijerinckii NCIMB
8052
Length = 251
Score = 41.5 bits (93), Expect = 0.021
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +2
Query: 239 CRPNPDHAPDSVA---KQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVI 409
CR + H V K G + +I + + +L+ KS+LP A + + W+ +EV+
Sbjct: 48 CRGSVKHGVGVVTGKRKDGTDAIQNVEMSVIPEGDIYRLVAKSELPGAEKFEAWIFDEVL 107
Query: 410 PQVLCTGKYAPAVEMDTNDVI 472
P + TG YA +D D++
Sbjct: 108 PCIRKTGMYATDELLDNPDLL 128
>UniRef50_Q185G9 Cluster: Putative phage-related regulatory protein;
n=1; Clostridium difficile 630|Rep: Putative
phage-related regulatory protein - Clostridium difficile
(strain 630)
Length = 121
Score = 41.1 bits (92), Expect = 0.028
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAK 478
+T+SGV +LI KS+ A Q+W+ +EV+P + TG Y TN+VI K
Sbjct: 74 LTESGVYKLIFKSRKEEAERFQDWISDEVLPSIRQTGAYI------TNNVIPK 120
>UniRef50_A4P0J2 Cluster: Possible prophage antirepressor; n=1;
Haemophilus influenzae 22.4-21|Rep: Possible prophage
antirepressor - Haemophilus influenzae 22.4-21
Length = 210
Score = 41.1 bits (92), Expect = 0.028
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
I + + ++I +S AIE Q W+ EEV+PQ+ TGKY
Sbjct: 69 INEPNLYRIIFRSNKAEAIEFQNWIFEEVLPQIRKTGKY 107
>UniRef50_A0RLT8 Cluster: Antirepressor, phage associated; n=3;
Bacillus cereus group|Rep: Antirepressor, phage
associated - Bacillus thuringiensis (strain Al Hakam)
Length = 262
Score = 41.1 bits (92), Expect = 0.028
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMD---TN-----DVIA 475
I + + +LI+KSKLP A + + W+ EEV+P + G Y ++ TN ++
Sbjct: 76 INEPNLYRLIVKSKLPQAEQFETWVFEEVLPSIRKHGAYMTDQVLEQAVTNPDFAIGLLT 135
Query: 476 KIDDLTQKL-TVPTQIWRKQPIAHF--VCQRND 565
K+ + +KL QI ++QP+ F C ++D
Sbjct: 136 KLKEEKEKLAAAQQQIVQQQPLVTFAEACMQSD 168
>UniRef50_A0A7D8 Cluster: Prophage antirepressor; n=1; Cyanophage
Ma-LMM01|Rep: Prophage antirepressor - Cyanophage
Ma-LMM01
Length = 270
Score = 41.1 bits (92), Expect = 0.028
Identities = 15/40 (37%), Positives = 30/40 (75%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 439
I++SG+ +L++ S+ P A Q+W+++EV+P + TG+Y+
Sbjct: 75 ISESGLYRLVLSSRKPQAELFQDWVVQEVLPTIRKTGRYS 114
>UniRef50_A5IZQ5 Cluster: Bro-2; n=1; Spodoptera litura
granulovirus|Rep: Bro-2 - Spodoptera litura granulovirus
Length = 368
Score = 40.7 bits (91), Expect = 0.037
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 350 MKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
M+SKLP A E Q WL EEV+P++ +GKY
Sbjct: 1 MRSKLPAAEEFQRWLFEEVLPELRKSGKY 29
>UniRef50_A4TYQ8 Cluster: BRO, N-terminal; n=1; Magnetospirillum
gryphiswaldense|Rep: BRO, N-terminal - Magnetospirillum
gryphiswaldense
Length = 300
Score = 40.3 bits (90), Expect = 0.049
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +2
Query: 317 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG 430
++++ V++LI+ SKLP A+ + W+ EEV+P + TG
Sbjct: 68 ILSEPDVLRLIVGSKLPAAVRFERWVFEEVLPTIRTTG 105
>UniRef50_A3QSE3 Cluster: Putative antirepressor; n=1; Clostridium
phage phiC2|Rep: Putative antirepressor - Clostridium
phage phiC2
Length = 212
Score = 40.3 bits (90), Expect = 0.049
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +2
Query: 317 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDL 490
LIT+ V +LI+ S LP A + + W+ +EV+P + TG+Y + T ++ I DL
Sbjct: 66 LITEGDVYRLIVGSNLPNAEKFESWVFDEVLPTIRQTGQYQAQQNVIT-ELTGTIGDL 122
>UniRef50_P44189 Cluster: Uncharacterized protein HI1418; n=8;
Pasteurellaceae|Rep: Uncharacterized protein HI1418 -
Haemophilus influenzae
Length = 201
Score = 40.3 bits (90), Expect = 0.049
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
I + + +LI+KS+ P A + W+ EEV+PQ+ TGKY
Sbjct: 86 INEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKY 124
>UniRef50_Q919R4 Cluster: CUN001 putative bro protein, ATP_GTP_A
motif, similar to AcMNPV ORF 2; n=1; Culex nigripalpus
NPV|Rep: CUN001 putative bro protein, ATP_GTP_A motif,
similar to AcMNPV ORF 2 - Culex nigripalpus NPV
Length = 593
Score = 39.9 bits (89), Expect = 0.065
Identities = 16/41 (39%), Positives = 28/41 (68%)
Frame = +2
Query: 314 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
V++ + GV QLI++S+LP A ++W+ V+P + TG+Y
Sbjct: 244 VMLNEGGVQQLILESRLPNAKRYKQWVCGTVLPSIRRTGRY 284
>UniRef50_A4KXK8 Cluster: Bro20; n=1; Heliothis virescens ascovirus
3e|Rep: Bro20 - Heliothis virescens ascovirus 3e
Length = 191
Score = 39.9 bits (89), Expect = 0.065
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +2
Query: 299 LHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
+ T I ++G+ +LIM S++P A + Q W+ +++P++ G+Y
Sbjct: 90 IRARTKFINRAGMFELIMSSRMPRARKFQRWVFSDLLPKLCQNGQY 135
>UniRef50_Q92FM4 Cluster: Lin0080 protein; n=14; root|Rep: Lin0080
protein - Listeria innocua
Length = 257
Score = 39.9 bits (89), Expect = 0.065
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAK 478
I ++G+ QLI KSKL A Q+W+ EV+P V G Y TND I K
Sbjct: 69 INEAGLYQLIFKSKLESAERFQDWVTSEVLPSVRKHGAYM------TNDTIEK 115
>UniRef50_Q30XK5 Cluster: Prophage antirepressor-like; n=2;
Desulfovibrio desulfuricans G20|Rep: Prophage
antirepressor-like - Desulfovibrio desulfuricans (strain
G20)
Length = 197
Score = 39.9 bits (89), Expect = 0.065
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 314 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVI 472
++I + G+ LI +S+ P AI Q+W+ +EV+P + G Y DT++ I
Sbjct: 82 LIINEPGLYTLIFQSRKPEAIAFQDWVCKEVLPSIRKHGAYFMMKPTDTDESI 134
>UniRef50_A7A2N3 Cluster: Putative uncharacterized protein; n=1;
Bifidobacterium adolescentis L2-32|Rep: Putative
uncharacterized protein - Bifidobacterium adolescentis
L2-32
Length = 263
Score = 39.9 bits (89), Expect = 0.065
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +2
Query: 314 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMD 457
++I++ G+ +LIM+S+ P A E Q W+ EV+P + G Y +D
Sbjct: 69 LIISEPGLYKLIMRSRKPEAKEFQRWVTHEVLPSIRKHGAYMTQQTLD 116
>UniRef50_Q9YVP8 Cluster: ORF MSV194 ALI motif gene family protein;
n=2; Melanoplus sanguinipes entomopoxvirus|Rep: ORF
MSV194 ALI motif gene family protein - Melanoplus
sanguinipes entomopoxvirus (MsEPV)
Length = 409
Score = 39.5 bits (88), Expect = 0.086
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +2
Query: 296 YLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDT 460
Y +T+ I++SG+ LI+ SK A ++W+ EV+P + G+Y E++T
Sbjct: 69 YNEKNTIYISESGLYSLILSSKKSEAKIFKKWITNEVLPNIRKHGEYKIKKELET 123
>UniRef50_Q9PAJ2 Cluster: Phage-related protein; n=22;
Gammaproteobacteria|Rep: Phage-related protein - Xylella
fastidiosa
Length = 530
Score = 39.5 bits (88), Expect = 0.086
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +2
Query: 287 DPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTND 466
D L T +I++ +++LI+ SKLP A + W+ EE++P + TG PA++ T+
Sbjct: 219 DSLGRSRETRIISEPDMLRLIVSSKLPAAERFERWVFEELLPTLRKTGN-RPALDHSTHS 277
Query: 467 VIA 475
A
Sbjct: 278 ANA 280
Score = 35.5 bits (78), Expect = 1.4
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA-----PAVEMDTNDVIAKID 484
I +SG+ LIM S P A + W+ EV+P + TG Y+ P + T D IA +
Sbjct: 348 INESGLYALIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGPTQDRIAALL 407
Query: 485 DLTQKL-TVP 511
+ Q + TVP
Sbjct: 408 LIGQYISTVP 417
>UniRef50_Q3J623 Cluster: Putative uncharacterized protein; n=1;
Rhodobacter sphaeroides 2.4.1|Rep: Putative
uncharacterized protein - Rhodobacter sphaeroides
(strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM158)
Length = 151
Score = 39.5 bits (88), Expect = 0.086
Identities = 16/41 (39%), Positives = 28/41 (68%)
Frame = +2
Query: 314 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
+LI++SG+ +L+M+ P A + Q+W+ EV+P + TG Y
Sbjct: 63 MLISESGLNKLVMRPDKPEAKKFQDWVTREVLPSIRKTGTY 103
>UniRef50_Q03FD4 Cluster: Uncharacterized phage-encoded protein;
n=3; root|Rep: Uncharacterized phage-encoded protein -
Pediococcus pentosaceus (strain ATCC 25745 / 183-1w)
Length = 267
Score = 39.5 bits (88), Expect = 0.086
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 317 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
+I++ G+ QL +SKLP A Q+W+ EEV+P + G Y
Sbjct: 68 VISEPGIYQLAGQSKLPTAEPFQDWIYEEVLPSIRKHGAY 107
>UniRef50_A1AN22 Cluster: BRO domain protein domain protein; n=1;
Pelobacter propionicus DSM 2379|Rep: BRO domain protein
domain protein - Pelobacter propionicus (strain DSM
2379)
Length = 247
Score = 39.5 bits (88), Expect = 0.086
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +2
Query: 317 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
+I + + +LIM+SKLP A +EW++ EV+P + TG Y
Sbjct: 68 IIPERDLYRLIMRSKLPAAERFEEWVVAEVLPAIRKTGFY 107
>UniRef50_A6N1W8 Cluster: Putative uncharacterized protein; n=1;
Microbacterium phage Min1|Rep: Putative uncharacterized
protein - Microbacterium phage Min1
Length = 250
Score = 39.5 bits (88), Expect = 0.086
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Frame = +2
Query: 317 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA---PAVEMDTNDVIAKIDD 487
+I + +++LI S+LP A + W EEV+P V+ TG Y PA+ D + ++
Sbjct: 65 VIGEPDLLRLITGSRLPQAERFERWAFEEVLPTVIRTGSYTAPPPALPQSYADALRELAA 124
Query: 488 LTQKL-TVPTQIWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRA 616
++ + T+ P A + D G+ +A++ +RA
Sbjct: 125 TVERAEALETENAALTPRAEAWDELADAGTDYAVGDAAKILQRA 168
Score = 35.1 bits (77), Expect = 1.9
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +3
Query: 84 FGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDG 215
FG D +R VL + P RFVA+D+AS+L Y + AI+ H G
Sbjct: 4 FGFDGHHVRVVLVEGLP-RFVARDVASALGYTDPTSAIKQHCRG 46
>UniRef50_Q9YMQ6 Cluster: Ld-bro-c; n=6; dsDNA viruses, no RNA
stage|Rep: Ld-bro-c - Lymantria dispar multicapsid
nuclear polyhedrosis virus (LdMNPV)
Length = 528
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 272 VAKQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
VA P HP T+ + + GV L+ +S P A E +++ E ++P + TGK+
Sbjct: 77 VAPPTTPANWHPETLFVLEPGVYALMARSTKPMAKEKMKFVYETILPTIRKTGKF 131
>UniRef50_Q8D9R6 Cluster: Prophage antirepressor; n=1; Vibrio
vulnificus|Rep: Prophage antirepressor - Vibrio
vulnificus
Length = 251
Score = 39.1 bits (87), Expect = 0.11
Identities = 19/60 (31%), Positives = 36/60 (60%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQK 499
+T+ GV ++ M++K A + Q W+L+EV+P + G Y P E++ +D + ++ D K
Sbjct: 84 VTEPGVYRVAMQAKSSGAKKFQNWVLKEVMPSIRRFGIYPPP-EVNDDDFLLQVADQQAK 142
>UniRef50_Q65PV1 Cluster: Lj965 prophage antirepressor; n=4;
root|Rep: Lj965 prophage antirepressor - Lactobacillus
johnsonii
Length = 278
Score = 39.1 bits (87), Expect = 0.11
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +2
Query: 311 TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
T++ +SG+ LI+ SKLP A + + W+ EV+P + G Y
Sbjct: 69 TIITNESGMYSLILSSKLPSAKKFKRWVTSEVLPAIREDGAY 110
>UniRef50_A6NXW4 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 309
Score = 39.1 bits (87), Expect = 0.11
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 254 DHAPDSVAKQGDPLYLHPHTV-LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG 430
DH ++ K+ P+ ++ I + V +LI++SKLP A + + W+ +EVIP + TG
Sbjct: 103 DHCR-AITKRSTPISGKVQSINFIPEGDVYRLIIRSKLPAAEKFELWVFDEVIPTIRKTG 161
Query: 431 KY 436
Y
Sbjct: 162 GY 163
>UniRef50_A6NWY1 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 153
Score = 39.1 bits (87), Expect = 0.11
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 317 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
LI +SG+ L++ SKLP A + + W+ EV+P + G Y
Sbjct: 68 LINESGLYSLVLSSKLPKAKQFRRWVTSEVLPSIRKHGAY 107
>UniRef50_A5I4G4 Cluster: BRO family protein; n=1; Clostridium
botulinum A str. ATCC 3502|Rep: BRO family protein -
Clostridium botulinum A str. ATCC 3502
Length = 266
Score = 39.1 bits (87), Expect = 0.11
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQK 499
I + + +LI S+LP A + + W+ +E++P + TG Y + ++ N + +D+ ++
Sbjct: 71 IDEGNLYRLITHSELPSAEKFEIWIFDEILPTIRKTGGYVASEDLFINTYLPYLDEQSKM 130
Query: 500 LTVPT-QIWRKQ 532
+ T +I RKQ
Sbjct: 131 VFRNTLEIVRKQ 142
>UniRef50_A3VVX0 Cluster: Hypothetical BRO family protein; n=1;
Roseovarius sp. 217|Rep: Hypothetical BRO family protein
- Roseovarius sp. 217
Length = 163
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +2
Query: 314 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVI 472
V++T+SG+ +L+M+S P A Q+W+ V+P + G Y D DV+
Sbjct: 101 VIVTESGLYKLVMRSDKPEAKAFQDWVTGTVLPSIRKDGGYIMGEGDDRPDVL 153
>UniRef50_Q7Y4K9 Cluster: Gp15; n=9; root|Rep: Gp15 - Streptococcus
phage SM1
Length = 239
Score = 39.1 bits (87), Expect = 0.11
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 266 DSVAKQGDPLYLHPHTVLI-TKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
+ KQG P +LI +SG+ LI+ SKLP A E + W+ EV+P + G +
Sbjct: 48 EDALKQGIPTSGGTQDMLIINESGLYSLILSSKLPQAREFKRWVTSEVLPAIRKQGGF 105
>UniRef50_UPI0000397D5D Cluster: COG3617: Prophage antirepressor;
n=1; Actinobacillus pleuropneumoniae serovar 1 str.
4074|Rep: COG3617: Prophage antirepressor -
Actinobacillus pleuropneumoniae serovar 1 str. 4074
Length = 215
Score = 38.7 bits (86), Expect = 0.15
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 439
I + + ++I +S AI+ Q W+ EEV+PQ+ TG+Y+
Sbjct: 15 INEPNLYRIIFRSNKSQAIDFQNWVFEEVLPQIRKTGQYS 54
>UniRef50_A4KX99 Cluster: Bro6; n=1; Heliothis virescens ascovirus
3e|Rep: Bro6 - Heliothis virescens ascovirus 3e
Length = 153
Score = 38.7 bits (86), Expect = 0.15
Identities = 32/79 (40%), Positives = 39/79 (49%)
Frame = +2
Query: 476 KIDDLTQKLTVPTQIWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPETAQLANRMADI 655
KI +L KLT T Q A V ND S RR +T +LANR+ADI
Sbjct: 46 KIAELNDKLTSMTG-HLIQSNASLVSVSNDLVSARR------------DTVKLANRIADI 92
Query: 656 AQDVIAKPSNPQLCHSLAV 712
Q V+AKPS + HSL +
Sbjct: 93 TQAVVAKPSVEECLHSLVM 111
>UniRef50_Q8FRD3 Cluster: Putative uncharacterized protein; n=1;
Corynebacterium efficiens|Rep: Putative uncharacterized
protein - Corynebacterium efficiens
Length = 262
Score = 38.7 bits (86), Expect = 0.15
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Frame = +2
Query: 317 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA--PAVE---MDTNDVIAKI 481
+IT+SG+ I++S+ P A E + W+ EV+P + G Y P +E D + +I
Sbjct: 65 VITESGLYSCILRSRKPEAKEFKRWVTREVLPSIRRHGGYLTDPKIEEILTDPDTIIKLA 124
Query: 482 DDLTQK 499
DL Q+
Sbjct: 125 TDLKQE 130
>UniRef50_Q6NK48 Cluster: Putative anti-repressor protein; n=3;
Corynebacterium|Rep: Putative anti-repressor protein -
Corynebacterium diphtheriae
Length = 272
Score = 38.7 bits (86), Expect = 0.15
Identities = 14/47 (29%), Positives = 30/47 (63%)
Frame = +2
Query: 317 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMD 457
++ +SG+ +L+ +S++P A E + W+ EV+P++ G YA ++
Sbjct: 67 VVNESGLYELLFQSRVPQAKEFRRWVTGEVLPEIRRHGMYATTATVE 113
>UniRef50_Q5F6A8 Cluster: Putative uncharacterized protein; n=2;
Neisseria gonorrhoeae FA 1090|Rep: Putative
uncharacterized protein - Neisseria gonorrhoeae (strain
ATCC 700825 / FA 1090)
Length = 332
Score = 38.7 bits (86), Expect = 0.15
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +2
Query: 314 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
+ I + + ++I +S+ A++ Q+W+ EEVIPQ+ TG Y
Sbjct: 117 LFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGY 157
>UniRef50_A6TLJ8 Cluster: Prophage antirepressor; n=5; root|Rep:
Prophage antirepressor - Alkaliphilus metalliredigens
QYMF
Length = 276
Score = 38.7 bits (86), Expect = 0.15
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +2
Query: 317 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKID---D 487
+I +SG+ LI+ SKLP A + W+ EV+P + G Y +++ +V+ D
Sbjct: 70 IINESGLYGLILSSKLPNAKRFKRWVTSEVLPSIQRHGVYMTPDKIE--EVLLNPDMIIG 127
Query: 488 LTQKLTVPTQIWRKQ 532
L KL V ++ +KQ
Sbjct: 128 LATKLKVEQELSKKQ 142
>UniRef50_A3DI85 Cluster: BRO-like protein; n=1; Clostridium
thermocellum ATCC 27405|Rep: BRO-like protein -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 248
Score = 38.7 bits (86), Expect = 0.15
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +2
Query: 311 TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 439
T ++ ++G+ LI+ S+ A E + W+ EVIPQ+ TG YA
Sbjct: 67 TYVVNEAGLYNLILGSRKQEAKEFKRWITHEVIPQIRKTGIYA 109
>UniRef50_Q9PYY1 Cluster: ORF62; n=1; Xestia c-nigrum
granulovirus|Rep: ORF62 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 211
Score = 38.3 bits (85), Expect = 0.20
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 260 APDSVAKQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEE 403
+P S P++ +T+ I K G+I LI S LP A E + W L +
Sbjct: 78 SPCSPGPNNQPIHWQSNTLFINKDGIISLINNSTLPVAHEFKRWFLAQ 125
>UniRef50_Q8QNG2 Cluster: EsV-1-117; n=1; Ectocarpus siliculosus
virus 1|Rep: EsV-1-117 - Ectocarpus siliculosus virus 1
Length = 524
Score = 38.3 bits (85), Expect = 0.20
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 311 TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
TV +T+ GV +LIM+S+ P A Q+W+ EV+ + GKY
Sbjct: 68 TVFVTEKGVYKLIMRSRKPVAKPFQDWVF-EVLKTIRKRGKY 108
>UniRef50_Q8G2Q7 Cluster: BRO family protein; n=3; Brucella|Rep: BRO
family protein - Brucella suis
Length = 140
Score = 38.3 bits (85), Expect = 0.20
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +2
Query: 296 YLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVE 451
+ P + +++SG+ +LIM+S+ P A + Q W+ + V+P + G Y E
Sbjct: 70 FRQPSLLSVSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGMYVRGEE 121
>UniRef50_Q84IK9 Cluster: Antirepressor protein; n=1; Clostridium
sordellii|Rep: Antirepressor protein - Clostridium
sordellii
Length = 187
Score = 37.9 bits (84), Expect = 0.26
Identities = 23/76 (30%), Positives = 37/76 (48%)
Frame = +2
Query: 278 KQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMD 457
K GD + I + + +LI+KSKL + + W+ EEV+P + G+Y + D
Sbjct: 63 KSGDAIMQFVSKKFIDEGNLYRLILKSKLKKVRKFEMWVFEEVLPTIRKHGEY---INED 119
Query: 458 TNDVIAKIDDLTQKLT 505
D + L +KLT
Sbjct: 120 IIDEVLDDPILLRKLT 135
>UniRef50_Q0SWM4 Cluster: BRO family, N-terminal domain protein;
n=3; Clostridium perfringens|Rep: BRO family, N-terminal
domain protein - Clostridium perfringens (strain SM101 /
Type A)
Length = 191
Score = 37.9 bits (84), Expect = 0.26
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +2
Query: 305 PHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKID 484
P V+ + G+ I SKLP I ++WL EV+P++ G Y+ E +++ K +
Sbjct: 85 PKLVIFYEEGLYGFINYSKLPIGISFRKWLRREVLPELRAKGTYSINKESYKDNLKYKNE 144
Query: 485 DLT 493
+L+
Sbjct: 145 NLS 147
>UniRef50_Q8W644 Cluster: Putative uncharacterized protein; n=2;
root|Rep: Putative uncharacterized protein -
Enterobacteria phage phiP27
Length = 274
Score = 37.9 bits (84), Expect = 0.26
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 314 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
+L+ +SG+ LI+KS+ A + W+ EVIP + TG Y
Sbjct: 72 LLVNESGLYALIIKSRKKQARRFKRWITSEVIPSIRKTGNY 112
>UniRef50_Q1A0E0 Cluster: Gp77; n=1; Mycobacterium phage Che12|Rep:
Gp77 - Mycobacterium phage Che12
Length = 280
Score = 37.1 bits (82), Expect = 0.46
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +2
Query: 302 HPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG 430
H ++I ++G+ +LIM+S +P A Q+W+ V+P + TG
Sbjct: 81 HRDMLVINEAGLYRLIMRSNVPAAAPFQDWVTAVVLPTIRKTG 123
>UniRef50_A5YK15 Cluster: Gp47; n=3; unclassified Siphoviridae|Rep:
Gp47 - Mycobacterium phage Tweety
Length = 334
Score = 37.1 bits (82), Expect = 0.46
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +2
Query: 314 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLT 493
V +T++GV L+M S+ P + W+ EV+P + TG Y+ +DTN + L
Sbjct: 141 VAVTEAGVWSLLMISRSPKVKPFKRWMTHEVLPSIRKTGGYS---AVDTNIALPDRKTLA 197
Query: 494 Q 496
Q
Sbjct: 198 Q 198
>UniRef50_A4KXE7 Cluster: Bro9; n=1; Heliothis virescens ascovirus
3e|Rep: Bro9 - Heliothis virescens ascovirus 3e
Length = 521
Score = 36.7 bits (81), Expect = 0.61
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +2
Query: 296 YLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
Y+ + I ++G+ +LI S++P A+E + W+ ++P++ G Y
Sbjct: 74 YVQAKSKFINRAGLFELIQASRMPKALEFKNWINSVLLPKLCDDGSY 120
>UniRef50_Q47D43 Cluster: BRO family protein; n=1; Dechloromonas
aromatica RCB|Rep: BRO family protein - Dechloromonas
aromatica (strain RCB)
Length = 58
Score = 36.7 bits (81), Expect = 0.61
Identities = 12/40 (30%), Positives = 28/40 (70%)
Frame = +2
Query: 317 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
L+ +SG+ +++++S+ A + Q+W+ +EV+P + TG +
Sbjct: 12 LLAESGLYKMVLRSRTQQAQKFQDWVTKEVLPSIRKTGSF 51
>UniRef50_A3DG82 Cluster: BRO-like protein; n=1; Clostridium
thermocellum ATCC 27405|Rep: BRO-like protein -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 254
Score = 36.7 bits (81), Expect = 0.61
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 439
I + + +LI+KSKLP A + W+ +EV+P + G YA
Sbjct: 68 IPEGDLYRLIVKSKLPKAERFERWVFDEVLPSIRKHGIYA 107
>UniRef50_Q91FW9 Cluster: 201R; n=2; Invertebrate iridescent virus
6|Rep: 201R - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 419
Score = 36.3 bits (80), Expect = 0.81
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 281 QGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 439
Q + Y ++ I + G+ LIM S+ P+A + Q+ + E+++P + G Y+
Sbjct: 87 QNELSYHEGKSIYINEPGLYNLIMSSEAPFAEQFQDMVYEKILPSIRKYGSYS 139
>UniRef50_Q5L2M6 Cluster: Phage associated-antirepressor; n=4;
root|Rep: Phage associated-antirepressor - Geobacillus
kaustophilus
Length = 246
Score = 36.3 bits (80), Expect = 0.81
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 287 DPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTND 466
D L T ++ + G+ LI+ S+ A + + W+ EVIP + TG Y ++
Sbjct: 59 DSLGRKQETFIVNEPGLYTLILGSRKSEAKQFKRWVTHEVIPTIRKTGGYVANDDLFVET 118
Query: 467 VIAKIDDLTQKLTVPT-QIWRKQ 532
+ D+ T+ L T + RKQ
Sbjct: 119 YLKHADEQTKLLFRATLETVRKQ 141
>UniRef50_Q8JM96 Cluster: Putative uncharacterized protein; n=1;
Mamestra configurata NPV-B|Rep: Putative uncharacterized
protein - Mamestra configurata NPV-B
Length = 134
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 290 PLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEE 403
P+ P+T I K G+I LI S LP A E ++W L +
Sbjct: 11 PIPWRPNTWFINKDGIISLINNSTLPVAHEFKKWFLAQ 48
>UniRef50_Q4KT10 Cluster: BRO-C; n=1; Chrysodeixis chalcites
nucleopolyhedrovirus|Rep: BRO-C - Chrysodeixis chalcites
nucleopolyhedrovirus
Length = 268
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 311 TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
T+ + +GV++LI S++ AI+L++WL V+ ++ G+Y
Sbjct: 85 TIFVNLAGVLELIKGSQIQKAIDLRQWLASTVLIKLCTDGQY 126
>UniRef50_A3M6B7 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 220
Score = 35.9 bits (79), Expect = 1.1
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
+ + + ++I +S P A + Q+W+ EV+P + TGKY
Sbjct: 23 VNEPNLYRIIFRSNKPEAKQFQDWVFNEVLPTIRKTGKY 61
>UniRef50_A3DFZ3 Cluster: BRO-like protein; n=1; Clostridium
thermocellum ATCC 27405|Rep: BRO-like protein -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 265
Score = 35.9 bits (79), Expect = 1.1
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 439
I + + +LI+KS+LP A ++W+ +EV+P + G YA
Sbjct: 71 IPEGDLFRLIVKSQLPAAERFEKWVFDEVLPTIRKYGVYA 110
>UniRef50_A0VJ08 Cluster: BRO-like; n=1; Delftia acidovorans
SPH-1|Rep: BRO-like - Delftia acidovorans SPH-1
Length = 270
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 314 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY-APAVE 451
++I +SG+ I+KS+ A ++W+ EV+P + TG Y PA +
Sbjct: 67 IVINESGLYSAILKSERQEAKRFKKWVTSEVLPSIRRTGSYTGPAAQ 113
>UniRef50_A7IY79 Cluster: Putative antirepressor; n=1;
Corynebacterium phage P1201|Rep: Putative antirepressor
- Corynebacterium phage P1201
Length = 307
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQ 496
+++SG+ +I+ S+ P A E + W+ EVIP + G Y + +++ +V+ D + Q
Sbjct: 113 VSESGLYDVILDSRKPEAKEFRRWITSEVIPSIRKHGAYLTSEKIE--EVLLNPDAIIQ 169
>UniRef50_Q0IL00 Cluster: Bro-f; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: Bro-f - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 245
Score = 35.5 bits (78), Expect = 1.4
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 275 AKQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGK 433
AK PL HP+ L+ + GV L+M+S A +WL+ ++P++ T +
Sbjct: 79 AKDEVPLNWHPNMWLLHEVGVYALVMRSNTTVARVFVQWLIGAILPELRKTDR 131
>UniRef50_Q6AC67 Cluster: Prophage antirepressor protein; n=2;
Leifsonia xyli subsp. xyli|Rep: Prophage antirepressor
protein - Leifsonia xyli subsp. xyli
Length = 260
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 317 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 439
L+ + G+ LI++S+ A + W+ EV+PQ+ TG Y+
Sbjct: 69 LVNEPGLYSLILRSRKTEARAFKRWVTHEVLPQIRRTGSYS 109
>UniRef50_A7NAQ8 Cluster: Two-component response regulator; n=10;
Francisella tularensis|Rep: Two-component response
regulator - Francisella tularensis subsp. holarctica FTA
Length = 228
Score = 35.5 bits (78), Expect = 1.4
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +2
Query: 302 HPHTVLITKSGVIQLIMKSKLPY-AIELQEWLLEEVIPQV-LCTGKYAPAVEMDTNDVIA 475
+P + +TK GVI + K +L AI +Q V+P+ L Y+ EMDTN +
Sbjct: 139 NPSSETVTKDGVIIPVSKKELALLAILVQN--AGRVVPKTQLLEEIYSTDKEMDTNTLEV 196
Query: 476 KIDDLTQKLTVPTQIWRKQPIAHFV 550
+ +L +K+ +P I + + +FV
Sbjct: 197 HMHNLRKKINIPNFIQTIRGVGYFV 221
>UniRef50_A3X9C1 Cluster: Putative uncharacterized protein; n=1;
Roseobacter sp. MED193|Rep: Putative uncharacterized
protein - Roseobacter sp. MED193
Length = 150
Score = 35.5 bits (78), Expect = 1.4
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 317 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCT 427
LI++SG+ +LI +S P A QEW+ +V+P V T
Sbjct: 95 LISESGLYKLITRSDKPEAKPFQEWVTRDVLPSVRLT 131
>UniRef50_A0QB24 Cluster: Gp54 protein; n=2; Mycobacterium avium
104|Rep: Gp54 protein - Mycobacterium avium (strain 104)
Length = 263
Score = 35.5 bits (78), Expect = 1.4
Identities = 16/60 (26%), Positives = 34/60 (56%)
Frame = +2
Query: 317 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQ 496
++ +SG+ LI +S A +++ W+ EV+P + TG Y V + ++++ + +TQ
Sbjct: 75 VVNESGMYALIFQSNKDRARDVRRWVTSEVLPSIRKTGSYGAPV-LTEDEIVHRALTITQ 133
>UniRef50_Q91BW9 Cluster: Bro-a; n=3; Nucleopolyhedrovirus|Rep:
Bro-a - Helicoverpa armigera NPV
Length = 244
Score = 35.1 bits (77), Expect = 1.9
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 290 PLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWL 394
P + P+T I ++GV +LIM S++ YA + + WL
Sbjct: 76 PRNMKPNTKFINRAGVFELIMSSQMEYARQFRYWL 110
>UniRef50_Q197E1 Cluster: Putative uncharacterized protein; n=1;
Aedes taeniorhynchus iridescent virus|Rep: Putative
uncharacterized protein - Aedes taeniorhynchus
iridescent virus
Length = 406
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 296 YLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
Y + I + G+ LIM S P+A E Q+ + E+++P + G Y
Sbjct: 94 YNEGKAIYINEPGLYALIMHSNAPFAEEFQDLVYEQILPSIRKYGSY 140
>UniRef50_A6R9I8 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 588
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 590 GSARLRKRAPETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGN 727
GS + AP+T+ + +AD+A+ V P PQ CH+ + + N
Sbjct: 20 GSGQPAPPAPDTSSILKALADMAKTVQQHPQQPQACHATSPHSIFN 65
>UniRef50_Q9YVP6 Cluster: ORF MSV196 ALI motif gene family protein;
n=2; Melanoplus sanguinipes entomopoxvirus|Rep: ORF
MSV196 ALI motif gene family protein - Melanoplus
sanguinipes entomopoxvirus (MsEPV)
Length = 202
Score = 34.3 bits (75), Expect = 3.3
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 296 YLHPHTVLITKSGVIQLIMKSK 361
Y+HPHTV I G+I+LI+K K
Sbjct: 54 YIHPHTVFINNFGLIELILKHK 75
>UniRef50_Q4ZAE4 Cluster: ORF018; n=4; Staphylococcus phage 53 sensu
lato|Rep: ORF018 - Staphylococcus phage 92
Length = 245
Score = 34.3 bits (75), Expect = 3.3
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 78 FKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKST--FEHADQI 251
F F E +R V + +P FV KDIA L Y + AIR HVD + K T F + Q
Sbjct: 7 FNFKE--LPVRTVEIENEPY-FVGKDIAEILGYARADNAIRNHVDSEDKLTHQFSASGQN 63
Query: 252 QTMLQI 269
+ M+ I
Sbjct: 64 RNMIII 69
>UniRef50_Q9YVP7 Cluster: ORF MSV195 ALI motif gene family protein;
n=1; Melanoplus sanguinipes entomopoxvirus|Rep: ORF
MSV195 ALI motif gene family protein - Melanoplus
sanguinipes entomopoxvirus (MsEPV)
Length = 87
Score = 33.9 bits (74), Expect = 4.3
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 105 LRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTFEH 239
+ V+ + V F AK+ A LKY N +AIR HV K++ +F++
Sbjct: 13 IHIVIDNNNKVLFKAKNCAEILKYTNPLKAIRDHVRQKHQISFKN 57
>UniRef50_Q8YHA3 Cluster: PHAGE-RELATED DNA BINDING PROTEIN; n=4;
Brucella|Rep: PHAGE-RELATED DNA BINDING PROTEIN -
Brucella melitensis
Length = 191
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 314 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVE 451
V+++++ + +LIM+S P A + Q W+ V+P +L G Y E
Sbjct: 90 VIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAILKDGLYVRGEE 135
>UniRef50_Q6NEV9 Cluster: Putative DNA-binding bacteriophage
protein; n=2; Actinomycetales|Rep: Putative DNA-binding
bacteriophage protein - Corynebacterium diphtheriae
Length = 264
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 439
IT+ + +LI+ SKL A + + W+ +EV+P + G YA
Sbjct: 70 ITEGDLYRLIISSKLSAAQKFEAWVFDEVLPTIRRHGVYA 109
Score = 32.7 bits (71), Expect = 9.9
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 84 FGEDTF-TLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVH 206
F D F T+R + D Q + F KD+A++L YVN +A++ H
Sbjct: 8 FTNDVFGTIRTITTDVQ-MPFCGKDVATALGYVNASKAVQDH 48
>UniRef50_Q3JTQ5 Cluster: BRO family, N-terminal domain protein;
n=1; Burkholderia pseudomallei 1710b|Rep: BRO family,
N-terminal domain protein - Burkholderia pseudomallei
(strain 1710b)
Length = 239
Score = 33.9 bits (74), Expect = 4.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 317 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVE 451
++++SG+ LIM+S+ P A ++W+ V+P + G Y E
Sbjct: 65 VVSESGLYALIMRSRKPQARAFRKWVTSVVLPAIRKDGSYVMGEE 109
>UniRef50_Q3R2M5 Cluster: BRO, N-terminal; n=8; Xylella
fastidiosa|Rep: BRO, N-terminal - Xylella fastidiosa
Ann-1
Length = 264
Score = 33.9 bits (74), Expect = 4.3
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA--PAVEMDTNDVIAKIDDLT 493
+ + G+ + +S P A+ Q+WL EV+P + TG+Y P +E D +K
Sbjct: 72 LAEPGLYFFLGRSDKPKALPFQKWLAGEVLPSIRKTGEYTVNPDLEYDQMRSYSKDRKQM 131
Query: 494 QKLTVPTQIW 523
++L W
Sbjct: 132 EELNTAHSRW 141
>UniRef50_Q8SDX0 Cluster: Anti-repressor; n=19; root|Rep:
Anti-repressor - Bacteriophage phi-11
Length = 274
Score = 33.9 bits (74), Expect = 4.3
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 78 FKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKST--FEHADQI 251
F F E +R V + +P FV KDIA L Y + AIR HVD + K T F + Q
Sbjct: 18 FNFKE--LPVRTVEIENEPY-FVGKDIAEILGYARSDNAIRNHVDSEDKLTHQFSASGQN 74
Query: 252 QTMLQI 269
+ M+ I
Sbjct: 75 RNMIII 80
>UniRef50_Q1GJ26 Cluster: Putative uncharacterized protein; n=2;
Rhodobacteraceae|Rep: Putative uncharacterized protein -
Silicibacter sp. (strain TM1040)
Length = 176
Score = 33.5 bits (73), Expect = 5.7
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 334 ARFGNEHCVWVQIQRVALLCHAIWSMVWI-WSACSNVDLYLPSTW 203
AR N W ++ + L A+WS VW+ W A V L L TW
Sbjct: 22 ARHANPWSGWTRLTILPLFALAVWSRVWLGWGALVPVVLVLIWTW 66
>UniRef50_A3DLS5 Cluster: CopG domain protein DNA-binding domain
protein; n=1; Staphylothermus marinus F1|Rep: CopG
domain protein DNA-binding domain protein -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 238
Score = 33.5 bits (73), Expect = 5.7
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 371 AIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQKLTVPTQIWRKQPI 538
A+ Q ++E + Q++ +E ND+ K+ ++T K+T PT I R++PI
Sbjct: 68 AVNEQLMVVENLRRQIIELYDKIDELEKRINDIDKKVQEITTKITRPTPIQREKPI 123
>UniRef50_Q06VQ4 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 258
Score = 33.1 bits (72), Expect = 7.5
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 263 PDSVAKQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
P P + ++ I K+G+ +LI S + A E ++W +V+P++ G+Y
Sbjct: 64 PREEEDDSSPFTIKYNSRFINKAGIWELIQNSPMKEAQEFRDWQNSDVMPKLCDVGEY 121
>UniRef50_A5ZCZ9 Cluster: Putative uncharacterized protein; n=1;
Bacteroides caccae ATCC 43185|Rep: Putative
uncharacterized protein - Bacteroides caccae ATCC 43185
Length = 255
Score = 33.1 bits (72), Expect = 7.5
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 320 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
+ +SG+ LI++S+ P A ++W+ EV+P + G Y
Sbjct: 107 VNESGLYTLILQSRKPEAKPFRKWVTSEVLPSIRKKGYY 145
>UniRef50_Q55YG4 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1002
Score = 33.1 bits (72), Expect = 7.5
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2
Query: 265 WSMVWIWSACSNVDLYLPSTWTRIARSQFTYFKLLAMSLA 146
W +WIW+ S LYL S+ RIAR Q + +L S A
Sbjct: 667 WCKLWIWNVGSPYSLYLGSS-ARIARLQADHMRLCLNSFA 705
>UniRef50_Q65943 Cluster: E1B protein, large T-antigen; n=3; Canine
adenovirus|Rep: E1B protein, large T-antigen - Canine
adenovirus 1 (strain CLL) (CAdV-1)
Length = 444
Score = 33.1 bits (72), Expect = 7.5
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 225 ICTCRRRG-HVLPVHNLHILNCWRCPWP 145
+CTC G HV+P+ N+H + PWP
Sbjct: 306 LCTCEGNGSHVVPLGNIHFASNREAPWP 333
>UniRef50_Q4J4T0 Cluster: Putative uncharacterized protein; n=1;
Azotobacter vinelandii AvOP|Rep: Putative
uncharacterized protein - Azotobacter vinelandii AvOP
Length = 130
Score = 32.7 bits (71), Expect = 9.9
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -2
Query: 667 HV-LRNVRHAVGQLRRFRRAFSQSCRAVSASRRATIISLANKMSDRLLPPNLR 512
HV +RN+ +G LR RRA S+SCR S SL + R + + R
Sbjct: 9 HVFMRNIHFRMGMLRLLRRARSRSCRQASRCPAGASPSLGRALPSRFVSIDCR 61
>UniRef50_A1FKV6 Cluster: BRO-like; n=1; Pseudomonas putida
W619|Rep: BRO-like - Pseudomonas putida W619
Length = 256
Score = 32.7 bits (71), Expect = 9.9
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 317 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 436
++++ G+ + +S P A+ LQ W+ EVIP + TG Y
Sbjct: 68 VLSEQGLYFFLGRSDKPGALPLQMWVAGEVIPSIRKTGSY 107
>UniRef50_Q53J66 Cluster: Retrotransposon protein, putative, Ty3-gypsy
sub-class; n=21; Magnoliophyta|Rep: Retrotransposon
protein, putative, Ty3-gypsy sub-class - Oryza sativa
subsp. japonica (Rice)
Length = 1748
Score = 32.7 bits (71), Expect = 9.9
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 254 DHAPDSVAKQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIP 412
D S K+ + + L P +L TKS + +LI + YA+E + +EV P
Sbjct: 988 DKKAQSDGKKPETINLKPKCLLATKSDITELIASPSVAYALEYSDVFPKEVPP 1040
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,344,132
Number of Sequences: 1657284
Number of extensions: 16933507
Number of successful extensions: 51961
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 49823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51943
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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