Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120406.Seq
         (749 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341201-1|AAR13765.1|  154|Anopheles gambiae NOS protein.             28   0.35 
AY341200-1|AAR13764.1|  154|Anopheles gambiae NOS protein.             28   0.35 
AY341199-1|AAR13763.1|  154|Anopheles gambiae NOS protein.             28   0.35 
AY341198-1|AAR13762.1|  154|Anopheles gambiae NOS protein.             28   0.35 
AY341197-1|AAR13761.1|  154|Anopheles gambiae NOS protein.             28   0.35 
AY341196-1|AAR13760.1|  154|Anopheles gambiae NOS protein.             28   0.35 
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    27   0.47 
AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    27   0.62 
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   1.9  
AY745205-1|AAU93472.1|   91|Anopheles gambiae cytochrome P450 pr...    25   2.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   5.8  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   7.6  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   7.6  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   7.6  

>AY341201-1|AAR13765.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 671 LSRLAQCPPCGWPAAPFPARVFAILPSRFSVASS 570
           L  L + P C  PAA F A++ A+ P  +S++SS
Sbjct: 107 LEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSS 140


>AY341200-1|AAR13764.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 671 LSRLAQCPPCGWPAAPFPARVFAILPSRFSVASS 570
           L  L + P C  PAA F A++ A+ P  +S++SS
Sbjct: 107 LEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSS 140


>AY341199-1|AAR13763.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 671 LSRLAQCPPCGWPAAPFPARVFAILPSRFSVASS 570
           L  L + P C  PAA F A++ A+ P  +S++SS
Sbjct: 107 LEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSS 140


>AY341198-1|AAR13762.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 671 LSRLAQCPPCGWPAAPFPARVFAILPSRFSVASS 570
           L  L + P C  PAA F A++ A+ P  +S++SS
Sbjct: 107 LEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSS 140


>AY341197-1|AAR13761.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 671 LSRLAQCPPCGWPAAPFPARVFAILPSRFSVASS 570
           L  L + P C  PAA F A++ A+ P  +S++SS
Sbjct: 107 LEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSS 140


>AY341196-1|AAR13760.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 671 LSRLAQCPPCGWPAAPFPARVFAILPSRFSVASS 570
           L  L + P C  PAA F A++ A+ P  +S++SS
Sbjct: 107 LEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSS 140


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 506 VPTQIWRKQPIAHFVCQRNDCGSTRR*NGSAR 601
           + T +WR+    H++C  N CG   + NG  R
Sbjct: 126 ISTPLWRRDGTGHYLC--NACGLYHKMNGMNR 155


>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 27.1 bits (57), Expect = 0.62
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 188 TGNTCPRRRQVQIDV*ACRPNPDHAPD 268
           T +  P+R  VQI   A + +PDH PD
Sbjct: 396 TKHVIPKRTLVQIPAYAIQRDPDHYPD 422


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
 Frame = +2

Query: 296 YLHPHTVLITKSGVIQLIMKS---KLPYAIELQEWLLE---EVIPQVLCTGKYAPAVEMD 457
           YL    +L+T S V+ + + +   + P    +  W+     E++P+VLC  +     E  
Sbjct: 305 YLLFTMMLVTLSVVVTIAVLNVNFRSPVTHRMAPWVHRVFIELLPKVLCIERPKKEDEPS 364

Query: 458 TNDVIAKIDDLTQKLTVPTQI 520
            ND     D LT    VP  +
Sbjct: 365 DNDDQTPTDVLTDVFQVPPDV 385


>AY745205-1|AAU93472.1|   91|Anopheles gambiae cytochrome P450
           protein.
          Length = 91

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 188 TGNTCPRRRQVQIDV*ACRPNPDHAPD 268
           T +  P+   VQI + A + +PDH PD
Sbjct: 19  TRHIVPKDTVVQIPIYAIQRDPDHYPD 45


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 632 LANRMADIAQDVIAKPSNPQ 691
           L NR+ DI+++  A PS+P+
Sbjct: 408 LYNRLRDISEETSALPSHPR 427


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +3

Query: 183 CERAIRVHVDGKYKSTFEHADQIQT 257
           CER +     G YK   EH   + T
Sbjct: 180 CERTLNASGGGSYKLKNEHGQTVST 204


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
 Frame = -2

Query: 598 CRAVSASRRAT-IISLANKMSDRL--LPPNLRWHR-QFLRQIVNFGNNII 461
           CR    SR    + + A+++++ L  L PN R  + +  RQ++N GN+II
Sbjct: 734 CRKQHHSRHLERVANKASRITNALTCLMPNKRGPKSRSRRQLINVGNSII 783


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 576  RDAETARQDCENARRKRRSWPTAW 647
            RDAE+  + CE A+R   S   AW
Sbjct: 988  RDAESWSRICEAAKRITASLQQAW 1011


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 827,627
Number of Sequences: 2352
Number of extensions: 18086
Number of successful extensions: 44
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)