Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120405.Seq
         (849 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g14540.1 68415.m01628 serpin family protein / serine protease...    55   7e-08
At1g64030.1 68414.m07252 serpin family protein / serine protease...    52   5e-07
At2g35580.1 68415.m04357 serpin family protein / serine protease...    49   3e-06
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi...    48   6e-06
At1g62170.1 68414.m07013 serpin family protein / serine protease...    48   8e-06
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi...    41   0.001
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi...    38   0.006
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi...    38   0.006
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi...    38   0.008
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi...    30   1.7  
At2g37420.1 68415.m04589 kinesin motor protein-related                 29   3.9  
At1g01930.1 68414.m00111 zinc finger protein-related contains Pf...    28   6.8  

>At2g14540.1 68415.m01628 serpin family protein / serine protease
           inhibitor family protein similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 407

 Score = 54.8 bits (126), Expect = 7e-08
 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = +3

Query: 648 FDADFEKVDFDNGAAAAGL-INKWVENKTNERIKDLLSEAASIRLRVWFWSHALYFKGTW 824
           F A F KVDF + A    L +N W    TN+ IK++L   +   L  W + +ALYFKG W
Sbjct: 147 FKASFAKVDFRHKAEEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWIYGNALYFKGAW 206

Query: 825 Q 827
           +
Sbjct: 207 E 207


>At1g64030.1 68414.m07252 serpin family protein / serine protease
           inhibitor family protein similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311, serpin [Triticum
           aestivum] GI:871551; contains Pfam profile PF00079:
           Serpin (serine protease inhibitor)
          Length = 385

 Score = 52.0 bits (119), Expect = 5e-07
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
 Frame = +3

Query: 558 GVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVDFDNGAAAAGL-INKWVENKTN 734
           G     AN ++I +     DPK K      F A +  VDF + A      +N WVE+ TN
Sbjct: 90  GPKITAANGLWIDKS-LPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKEVNSWVEHHTN 148

Query: 735 ERIKDLLSEAASIRLRVWFWSHALYFKGTWQ 827
             IKDLL + +   L    +++AL FKG W+
Sbjct: 149 NLIKDLLPDGSVTSLTNKIYANALSFKGAWK 179


>At2g35580.1 68415.m04357 serpin family protein / serine protease
           inhibitor family protein similar to protein zx [Hordeum
           vulgare subsp. vulgare] GI:19071, serpin [Triticum
           aestivum] GI:1885350; contains Pfam profile PF00079:
           Serpin (serine protease inhibitor)
          Length = 374

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
 Frame = +3

Query: 558 GVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVDFDNGAAAAGL-INKWVENKTN 734
           G T + AN ++I E    ++P  K   +  + A F +VDF   A      +N WVE +TN
Sbjct: 89  GPTISAANGLWI-EKTLNVEPSFKDLLLNSYKAAFNRVDFRTKADEVNREVNSWVEKQTN 147

Query: 735 ERIKDLL-SEAASIRLRVWFWSHALYFKGTWQT 830
             I +LL S   S  L    +++AL+F G W +
Sbjct: 148 GLITNLLPSNPKSAPLTDHIFANALFFNGRWDS 180


>At1g47710.1 68414.m05302 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 391

 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
 Frame = +3

Query: 558 GVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVDFDNGAAAA-GLINKWVENKTN 734
           G   +VAN  +I +      P  K+   + + A   + DF + A      +N W E +TN
Sbjct: 89  GPKLSVANGAWIDKS-LSFKPSFKQLLEDSYKAASNQADFQSKAVEVIAEVNSWAEKETN 147

Query: 735 ERIKDLLSEAASIRLRVWFWSHALYFKGTW 824
             I ++L E ++  +    +++ALYFKGTW
Sbjct: 148 GLITEVLPEGSADSMTKLIFANALYFKGTW 177


>At1g62170.1 68414.m07013 serpin family protein / serine protease
           inhibitor family protein similar to phloem serpin-1
           GI:9937311 from [Cucurbita maxima]; contains Pfam
           profile PF00079: Serpin (serine protease inhibitor)
          Length = 433

 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
 Frame = +3

Query: 624 LKKDAVE-VFDADFEKVDFDNGAAAAGL-INKWVENKTNERIKDLLSEAASIRLRVWFWS 797
           L KD  +  F A F +VDF + A      +N W  + TN  IKDLL   +   L    + 
Sbjct: 174 LSKDLFKNFFSAAFAQVDFRSKAEEVRTEVNAWASSHTNGLIKDLLPRGSVTSLTDRVYG 233

Query: 798 HALYFKGTWQ 827
            ALYFKGTW+
Sbjct: 234 SALYFKGTWE 243


>At3g45220.1 68416.m04880 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 393

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
 Frame = +3

Query: 630 KDAVE-VFDADFEKVDF-DNGAAAAGLINKWVENKTNERIKDLLSEAA--SIRLRVWFWS 797
           KD +E  ++A   +VDF    A     +N W E  TN  IK++LS+ +  +IR  +   +
Sbjct: 111 KDLLENSYNATCNQVDFATKPAEVINEVNAWAEVHTNGLIKEILSDDSIKTIRESMLILA 170

Query: 798 HALYFKGTW 824
           +A+YFKG W
Sbjct: 171 NAVYFKGAW 179


>At1g63280.1 68414.m07154 serpin-related / serine protease
           inhibitor-related similar to protein zx [Hordeum vulgare
           subsp. vulgare] GI:19071, serpin [Triticum aestivum]
           GI:1885346
          Length = 120

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 705 INKWVENKTNERIKDLLSEAASIRLRVWFWSHALYFKGTWQ 827
           +NKW  + TN  I DLL   +     V  + +ALYFKG W+
Sbjct: 16  LNKWASDHTNGLIIDLLPRGSVKSETVQVYGNALYFKGAWE 56


>At1g51330.1 68414.m05772 serpin-related / serine protease
           inhibitor-related similar to serpin [Hordeum vulgare
           subsp. vulgare] CAA64599.1  GI:1197577
          Length = 193

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 681 NGAAAAGL-INKWVENKTNERIKDLLSEAASIRLRVWFWSHALYFKGTWQ 827
           NGA    + +N W    TN  IK+LL   +     +  + +ALYFKG W+
Sbjct: 30  NGAEEVRMEVNSWALRHTNGLIKNLLPPGSVTNQTIKIYGNALYFKGAWE 79


>At2g25240.1 68415.m03020 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 324

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
 Frame = +3

Query: 570 NVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVDF-DNGAAAAGLINKWVENKTNERIK 746
           ++AN ++I +  + L    K      + A   +VDF    +     +N W E  TN  IK
Sbjct: 28  SIANGVWIDKF-FSLKLSFKDLLENSYKATCSQVDFASKPSEVIDEVNTWAEVHTNGLIK 86

Query: 747 DLLSEAA--SIRLRVWFWSHALYFKGTWQT 830
            +LS  +  +IR      ++A+YFKG W +
Sbjct: 87  QILSRDSIDTIRSSTLVLANAVYFKGAWSS 116


>At2g26390.1 68415.m03167 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 389

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 394 NVVSSPLSAEYLLALITLGTTDPAHEELLTSL 489
           NVV SP+S   LL+LI  G+     EE+L+ L
Sbjct: 31  NVVFSPMSINVLLSLIAAGSNPVTKEEILSFL 62


>At2g37420.1 68415.m04589 kinesin motor protein-related 
          Length = 1039

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = -2

Query: 326 ESILRTGFFISNS--VNSINKTLANISIIINPLVYYDSSIIFTSTEENKILSPPVPSKS* 153
           E+ILR+G     +     INK+L  +  +IN LV + S + +  ++  ++L   +  K+ 
Sbjct: 301 ENILRSGARDGRAREAGEINKSLLTLGRVINALVEHSSHVPYRDSKLTRLLRDSLGGKTK 360

Query: 152 YLLITT 135
             +I T
Sbjct: 361 TCIIAT 366


>At1g01930.1 68414.m00111 zinc finger protein-related contains Pfam
           PF00023: Ankyrin repeat; contains Pfam PF00096: Zinc
           finger, C2H2 type domain and Prosite PS00028: Zinc
           finger, C2H2 type, domain
          Length = 580

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +3

Query: 657 DFEKVDFDNG-AAAAGLINKWVENKTNERIKDLLSEAASIR-LRVWFWSHALYFKGT 821
           D E V F+N    +       VEN+  ER+++L+ E    R +RV   +   +F GT
Sbjct: 178 DAESVSFENDRGVSVDCCGSLVENEVTERLRNLIRENKDDRQMRVVLLASGGHFAGT 234


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,046,634
Number of Sequences: 28952
Number of extensions: 309346
Number of successful extensions: 793
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1970388800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)