Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120403.Seq
         (837 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.98 
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   4.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.1  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +2

Query: 62  WINEIPTVPI 91
           W+NEIPT+P+
Sbjct: 321 WLNEIPTMPV 330


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 306 YYRPRTASAQPSK 268
           YYRPRT+  +P +
Sbjct: 232 YYRPRTSRTEPPR 244


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 457 ALFFDRCTAPVKLPSWQC 404
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 457 ALFFDRCTAPVKLPSWQC 404
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -2

Query: 761 PSSRSLLMGEQSNAWRNFVRNDRKSRH 681
           PS  S   G  S+ W N+      SRH
Sbjct: 133 PSVSSCHQGFSSSTWCNYSAYSSASRH 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,924
Number of Sequences: 336
Number of extensions: 4261
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)