Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120403.Seq
         (837 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    74   7e-13
X04701-1|CAA28407.1|  705|Homo sapiens protein ( Human mRNA for ...    31   5.2  
M14058-1|AAA51851.1|  705|Homo sapiens C1R protein.                    31   5.2  
BC035220-1|AAH35220.1|  705|Homo sapiens complement component 1,...    31   5.2  
AB083037-1|BAC19850.2|  705|Homo sapiens r subcomponent of compl...    31   5.2  
BC126910-1|AAI26911.2| 1768|Homo sapiens TNS1 protein protein.         31   6.8  
BC116188-1|AAI16189.1| 1713|Homo sapiens TNS1 protein protein.         31   6.8  
AB209238-1|BAD92475.1|  873|Homo sapiens tensin variant protein.       31   6.8  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 73.7 bits (173), Expect = 7e-13
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = -3

Query: 700 MIGRADIEGSKSNVAMNAWLPQASYPCGNFSGTSC*K 590
           MIGRADIEGSKS+VAMNAW PQASYPCGNFS TSC K
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 37


>X04701-1|CAA28407.1|  705|Homo sapiens protein ( Human mRNA for
           complement component C1r. ).
          Length = 705

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 64  D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 174
           D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>M14058-1|AAA51851.1|  705|Homo sapiens C1R protein.
          Length = 705

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 64  D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 174
           D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>BC035220-1|AAH35220.1|  705|Homo sapiens complement component 1, r
           subcomponent protein.
          Length = 705

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 64  D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 174
           D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>AB083037-1|BAC19850.2|  705|Homo sapiens r subcomponent of
           complement component 1 protein.
          Length = 705

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 64  D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 174
           D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>BC126910-1|AAI26911.2| 1768|Homo sapiens TNS1 protein protein.
          Length = 1768

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
 Frame = -2

Query: 356  ATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMK*WFFSDDRAKRS--PTYATPLMSPY 183
            A +PL  LG K   PADI+   P    R   E++     +  RA+ S   +++ P    Y
Sbjct: 1030 AKTPLSALGLKPHNPADIL-LHPTGEPRSYVESVARTAVAGPRAQDSEPKSFSAPATQAY 1088

Query: 182  NAR--LESSSTGSSFPADSPKPVPLAVVSLDS 93
                 L + + G SF + SP      ++S DS
Sbjct: 1089 GHEIPLRNGTLGGSFVSPSPLSTSSPILSADS 1120


>BC116188-1|AAI16189.1| 1713|Homo sapiens TNS1 protein protein.
          Length = 1713

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
 Frame = -2

Query: 356  ATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMK*WFFSDDRAKRS--PTYATPLMSPY 183
            A +PL  LG K   PADI+   P    R   E++     +  RA+ S   +++ P    Y
Sbjct: 975  AKTPLSALGLKPHNPADIL-LHPTGEPRSYVESVARTAVAGPRAQDSEPKSFSAPATQAY 1033

Query: 182  NAR--LESSSTGSSFPADSPKPVPLAVVSLDS 93
                 L + + G SF + SP      ++S DS
Sbjct: 1034 GHEIPLRNGTLGGSFVSPSPLSTSSPILSADS 1065


>AB209238-1|BAD92475.1|  873|Homo sapiens tensin variant protein.
          Length = 873

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
 Frame = -2

Query: 356 ATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMK*WFFSDDRAKRS--PTYATPLMSPY 183
           A +PL  LG K   PADI+   P    R   E++     +  RA+ S   +++ P    Y
Sbjct: 135 AKTPLSALGLKPHNPADIL-LHPTGEPRSYVESVARTAVAGPRAQDSEPKSFSAPATQAY 193

Query: 182 NAR--LESSSTGSSFPADSPKPVPLAVVSLDS 93
                L + + G SF + SP      ++S DS
Sbjct: 194 GHEIPLRNGTLGGSFVSPSPLSTSSPILSADS 225


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,934,687
Number of Sequences: 237096
Number of extensions: 2915221
Number of successful extensions: 6241
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6237
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)