Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120402.Seq
         (801 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.7  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 185 NLLYSCFFFYFLKGL*TMIS 126
           NL Y CF FY+L  +  M S
Sbjct: 320 NLFYLCFCFYWLLVMVAMFS 339


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 185 NLLYSCFFFYFLKGL*TMIS 126
           NL Y CF FY+L  +  M S
Sbjct: 276 NLFYLCFCFYWLLVMVAMFS 295


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 712 YYSTHNLSLRNAEWEAKL 765
           YY   N+  +NAE+  K+
Sbjct: 418 YYQNENMLQKNAEYSGKV 435


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -1

Query: 159 LLSEGSLNNDFNNMIYVFLFEV*NIYSFQYDATTVFKFHK 40
           + S+    N+ +  I +  F+  ++Y F Y    V  F+K
Sbjct: 51  IYSKSFHRNEIHIKIVLMFFKEASLYCFNYYVIVVTTFYK 90


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 581 IPRWHIDDTVHVYVT 625
           +PRW+I  T+ V +T
Sbjct: 37  VPRWYICYTIGVIIT 51


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 712 YYSTHNLSLRNAEWEAKL 765
           YY   N+  +NAE+  K+
Sbjct: 366 YYQNENMLQKNAEYSGKV 383


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,821
Number of Sequences: 336
Number of extensions: 3971
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)