Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120402.Seq
         (801 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    27   0.27 
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    27   0.27 
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    27   0.27 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   4.4  

>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 137 FKDPSESKKKNMNTINFQTFVNSFQNRLEPPVRQHLKNV 253
           F+D  E    N NT+    F++ +   L+  +  H+K V
Sbjct: 61  FEDSDEGSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKV 99


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 137 FKDPSESKKKNMNTINFQTFVNSFQNRLEPPVRQHLKNV 253
           F+D  E    N NT+    F++ +   L+  +  H+K V
Sbjct: 61  FEDSDEGSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKV 99


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 137 FKDPSESKKKNMNTINFQTFVNSFQNRLEPPVRQHLKNV 253
           F+D  E    N NT+    F++ +   L+  +  H+K V
Sbjct: 61  FEDSDEGSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKV 99


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -3

Query: 232 NWWFQSILKAVDKGLKI 182
           NW  Q ++K+++KG ++
Sbjct: 841 NWSNQDVIKSIEKGYRL 857


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,175
Number of Sequences: 438
Number of extensions: 4458
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)