Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120401.Seq
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   6.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.4  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 394 FTFLRICMTHVNSDVIVLYESSIIKGGNLCIWTKKCY*L-SIQIDLNVI 537
           F +L++ +T  +   +     +I K G    +TKKCY L  + IDL ++
Sbjct: 20  FKYLKVLVTFAHFICLFPITINIRKNGLNYNFTKKCYFLRMVLIDLLIV 68


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +3

Query: 456 IYYQR-WQSVHLDKKMLL 506
           +Y  R WQ +HL+KK +L
Sbjct: 531 VYNHRPWQQLHLNKKQIL 548


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 32  RYYNVMLCCKIS*YSN 79
           +YYN++  C+I  Y N
Sbjct: 328 KYYNILYFCRIMVYLN 343


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 464 IIDDSYKTMTSEFTCVIQMRKKVK 393
           ++++ YKT  S +TC  +  +K +
Sbjct: 219 VLEEKYKTSGSLYTCWSEFTQKTQ 242


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +3

Query: 18  FFLIKDIIMSC-YVVKYLSTVTFIYFFNKINM 110
           + LI  I+ S  Y+V  L  VTF+ F  KI +
Sbjct: 270 YVLILYILESLLYMVTKLVVVTFLKFIKKIQI 301


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,511
Number of Sequences: 336
Number of extensions: 4016
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)