Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120400.Seq
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13374| Best HMM Match : Cornifin (HMM E-Value=0.34) 33 0.25
SB_11767| Best HMM Match : Kinesin (HMM E-Value=0) 33 0.33
SB_1411| Best HMM Match : PT (HMM E-Value=0.079) 31 1.00
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 30 2.3
SB_57729| Best HMM Match : PADR1 (HMM E-Value=0.52) 29 3.0
SB_43571| Best HMM Match : Ank (HMM E-Value=3e-34) 29 4.0
SB_58669| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_57835| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_18285| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_4361| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_3041| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_46816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_33828| Best HMM Match : rve (HMM E-Value=3.9e-20) 29 5.3
SB_33095| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_31771| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_21743| Best HMM Match : rve (HMM E-Value=4e-17) 29 5.3
SB_13395| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_53393| Best HMM Match : RVT_1 (HMM E-Value=5.8e-30) 28 7.0
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 28 7.0
SB_19811| Best HMM Match : RVT_1 (HMM E-Value=3.5e-32) 28 7.0
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 28 7.0
SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064) 28 9.3
SB_1067| Best HMM Match : Trigger_C (HMM E-Value=0.73) 28 9.3
>SB_13374| Best HMM Match : Cornifin (HMM E-Value=0.34)
Length = 1197
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/38 (50%), Positives = 20/38 (52%)
Frame = +1
Query: 256 AHCSRAAGCARSSTSGAHCSGTAGCARSSTSGAHTGRT 369
A S G A SST GA S T G A SST GA + T
Sbjct: 989 AESSSTPGAASSSTPGAALSRTPGAAPSSTPGAASSTT 1026
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/33 (57%), Positives = 19/33 (57%)
Frame = +1
Query: 256 AHCSRAAGCARSSTSGAHCSGTAGCARSSTSGA 354
A SR G A SST GA S T G A SST GA
Sbjct: 1005 AALSRTPGAAPSSTPGAASSTTPGAAPSSTPGA 1037
Score = 31.9 bits (69), Expect = 0.57
Identities = 19/40 (47%), Positives = 20/40 (50%)
Frame = +1
Query: 256 AHCSRAAGCARSSTSGAHCSGTAGCARSSTSGAHTGRTAR 375
A S G SST GA S T G A SST GA + T R
Sbjct: 1037 AAMSSIPGATSSSTPGAASSSTPGAAPSSTPGAASSITRR 1076
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = +1
Query: 256 AHCSRAAGCARSSTSGAHCSGTAGCARSSTSGAHTGRT 369
A S G A SST GA S G SST GA + T
Sbjct: 1021 AASSTTPGAAPSSTPGAAMSSIPGATSSSTPGAASSST 1058
>SB_11767| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1230
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 223 ILRALLAYRWL-AHCSRAAGCARSSTSGAHCSGTAGCARSSTSGAHTGRTARVPLAAR 393
I RAL YR + AHC+ + ++TS AHC+ T+ ++TS AH T+ A+
Sbjct: 154 IFRAL--YRNIYAHCTTTSTAHCTATSTAHCTATSIAHCTTTSTAHCTATSTAHCTAK 209
>SB_1411| Best HMM Match : PT (HMM E-Value=0.079)
Length = 131
Score = 31.1 bits (67), Expect = 1.00
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -2
Query: 368 VRPVCAPEVDERAQPAVPEQCAPEVDERAQPAAREQC 258
V P+C P VD QP V C P D QP C
Sbjct: 48 VGPICHPSVDPIFQPRVGPICQPSEDPIFQPGVGPIC 84
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -2
Query: 368 VRPVCAPEVDERAQPAVPEQCAPEVDERAQPAAREQC 258
V P+C P D QP V C P VD QP C
Sbjct: 32 VGPICHPSDDPIFQPGVGPICHPSVDPIFQPRVGPIC 68
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 440 AYCATARVPLAARTACVPLPAHTLACRYLRALAC 541
AY + V L+ RTAC P+ AH+L YL AC
Sbjct: 2276 AYLSAQLVGLSQRTACGPILAHSL-WAYLSRTAC 2308
>SB_57729| Best HMM Match : PADR1 (HMM E-Value=0.52)
Length = 105
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 457 SRTAGCAH--CLRAATCAHSRVPLPARARLLQTCILHVLLACRCMR 588
+RT+ H CLRA C S + L A L+ C++ + C +
Sbjct: 29 ARTSFLIHTDCLRAGDCPSSAIALEAGVSLIHHCLVTIFYPIECSK 74
>SB_43571| Best HMM Match : Ank (HMM E-Value=3e-34)
Length = 584
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -3
Query: 160 RLCALLLEHGADSLLTS 110
RLC LL++HGAD LT+
Sbjct: 242 RLCQLLIQHGADQTLTN 258
>SB_58669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3038
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 326 PAVPEQCAPEVDERAQPAAREQCASQRYASSARSIH 219
P+VPE P ++ Q REQ +RY+S+ S H
Sbjct: 2887 PSVPENLKPRKIDQEQLLKREQEYRERYSSNYNSRH 2922
>SB_57835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 326 PAVPEQCAPEVDERAQPAAREQCASQRYASSARSIH 219
P+VPE P ++ Q REQ +RY+S+ S H
Sbjct: 1105 PSVPENLKPRKIDQEQLLKREQEYRERYSSNYNSRH 1140
>SB_18285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1094
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = -3
Query: 223 YTSEVD--ERAQVAALEQHVQSAR--LCALLLEHGADSLLTSRRRQRPASV 83
Y ++V+ +R L + Q R LCALLL HGA+ + ++ Q P +
Sbjct: 676 YNTDVNATDRWLFTPLHEAAQKGRTQLCALLLAHGAEPSMKNQEGQSPVDL 726
>SB_4361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 326 PAVPEQCAPEVDERAQPAAREQCASQRYASSARSIH 219
P+VPE P ++ Q REQ +RY+S+ S H
Sbjct: 631 PSVPENLKPRKIDQEQLLKREQEYRERYSSNYNSRH 666
>SB_3041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 939
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 326 PAVPEQCAPEVDERAQPAAREQCASQRYASSARSIH 219
P+VPE P ++ Q REQ +RY+S+ S H
Sbjct: 788 PSVPENLRPRKIDQEQLLKREQEYRERYSSNYNSRH 823
>SB_46816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1165
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 326 PAVPEQCAPEVDERAQPAAREQCASQRYASSARSIH 219
P+VPE P ++ Q REQ +RY+S+ S H
Sbjct: 1014 PSVPENLKPRKIDQEQLLKREQEYRERYSSNYNSRH 1049
>SB_33828| Best HMM Match : rve (HMM E-Value=3.9e-20)
Length = 298
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 326 PAVPEQCAPEVDERAQPAAREQCASQRYASSARSIH 219
P+VPE P ++ Q REQ +RY+S+ S H
Sbjct: 153 PSVPENLRPRKIDQEQLLKREQEYRERYSSNYNSRH 188
>SB_33095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 326 PAVPEQCAPEVDERAQPAAREQCASQRYASSARSIH 219
P+VPE P ++ Q REQ +RY+S+ S H
Sbjct: 682 PSVPENLKPRKIDQEQLLKREQEYRERYSSNYNSRH 717
>SB_31771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1963
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 326 PAVPEQCAPEVDERAQPAAREQCASQRYASSARSIH 219
P+VPE P ++ Q REQ +RY+S+ S H
Sbjct: 1812 PSVPENLKPRKIDQEQLLKREQEYRERYSSNYNSRH 1847
>SB_21743| Best HMM Match : rve (HMM E-Value=4e-17)
Length = 865
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 326 PAVPEQCAPEVDERAQPAAREQCASQRYASSARSIH 219
P+VPE P ++ Q REQ +RY+S+ S H
Sbjct: 714 PSVPENIKPRKIDQEQLLKREQEYRERYSSNYNSRH 749
>SB_13395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 326 PAVPEQCAPEVDERAQPAAREQCASQRYASSARSIH 219
P+VPE P ++ Q REQ +RY+S+ S H
Sbjct: 1222 PSVPENLKPRKIDQEQLLKREQEYRERYSSNYNSRH 1257
>SB_53393| Best HMM Match : RVT_1 (HMM E-Value=5.8e-30)
Length = 1246
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 326 PAVPEQCAPEVDERAQPAAREQCASQRYASSARSIH 219
P VPE P ++ Q REQ +RY+S+ S H
Sbjct: 1135 PTVPENLRPRKIDQEQLLKREQEYRERYSSNYNSHH 1170
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 326 PAVPEQCAPEVDERAQPAAREQCASQRYASSARSIH 219
P+VPE P ++ Q REQ +RY+S S H
Sbjct: 397 PSVPENLRPRKIDQEQLLKREQEYRERYSSDYNSRH 432
>SB_19811| Best HMM Match : RVT_1 (HMM E-Value=3.5e-32)
Length = 670
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 326 PAVPEQCAPEVDERAQPAAREQCASQRYASSARSIH 219
P+VPE P ++ Q REQ +RY+S S H
Sbjct: 617 PSVPENLRPRKIDQEQLLKREQEYRERYSSDYNSRH 652
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 10/36 (27%)
Frame = +3
Query: 291 IYFWRALLGY----RWLRAL------IYFWRAYWAH 368
+Y+WR LL Y R+ R L +++WR WA+
Sbjct: 373 VYYWRTLLAYTMGVRYWRTLLAYTMGVHYWRTLWAY 408
>SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064)
Length = 1230
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 371 AVRPVCAPEVDERAQPAVPEQCAPEVDERAQPAAREQCASQ 249
A +PV + V+ +PA PE A + DE Q + ASQ
Sbjct: 829 AYKPVASKPVEVETKPAEPEHAAYKPDEPEQAFFTPEPASQ 869
>SB_1067| Best HMM Match : Trigger_C (HMM E-Value=0.73)
Length = 639
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -2
Query: 365 RPVCAPEVDERAQPAVPEQCAPEVDERAQPAAREQCASQ 249
R VCA +DE A A+ E +DE A A ++CA Q
Sbjct: 392 RGVCAEAIDECALQAIDECALQAIDECALQAI-DECALQ 429
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,460,831
Number of Sequences: 59808
Number of extensions: 350884
Number of successful extensions: 1345
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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