Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120400.Seq
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132196-1|AAD34784.1| 1181|Drosophila melanogaster unknown prot...    31   2.2  
AE014297-3830|AAF56487.1| 1181|Drosophila melanogaster CG4719-PA...    31   2.2  
AY075403-1|AAL68232.1|  725|Drosophila melanogaster LD30655p pro...    29   8.9  
AE014298-127|AAN09033.1|  507|Drosophila melanogaster CG32815-PA...    29   8.9  
AE014297-4313|AAF56852.1|  852|Drosophila melanogaster CG1401-PA...    29   8.9  
AE014297-303|AAF51991.1|  725|Drosophila melanogaster CG1433-PA ...    29   8.9  

>AF132196-1|AAD34784.1| 1181|Drosophila melanogaster unknown
           protein.
          Length = 1181

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -3

Query: 160 RLCALLLEHGADSLLTSRRRQRPASVNKSD 71
           +LC+LLL HGAD+ + ++  Q P  +  +D
Sbjct: 753 QLCSLLLAHGADAYMKNQEGQTPIELATAD 782


>AE014297-3830|AAF56487.1| 1181|Drosophila melanogaster CG4719-PA
           protein.
          Length = 1181

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -3

Query: 160 RLCALLLEHGADSLLTSRRRQRPASVNKSD 71
           +LC+LLL HGAD+ + ++  Q P  +  +D
Sbjct: 753 QLCSLLLAHGADAYMKNQEGQTPIELATAD 782


>AY075403-1|AAL68232.1|  725|Drosophila melanogaster LD30655p
           protein.
          Length = 725

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 28/91 (30%), Positives = 38/91 (41%)
 Frame = +1

Query: 265 SRAAGCARSSTSGAHCSGTAGCARSSTSGAHTGRTARVPLAARTXXXXXXXXXXXXXXXX 444
           S+ +G ARS  S +  S  +G ARS  SG     T   P + R+                
Sbjct: 75  SQLSGSARSKRSRSAHSRRSGSARSRKSG-----TPESPQSHRSGSLQSRKSGSPQSRRS 129

Query: 445 XXXCSRTAGCAHCLRAATCAHSRVPLPARAR 537
               SR +G  H  R+ + AHSR    AR+R
Sbjct: 130 GSPQSRKSGSTHSRRSGS-AHSRRSGSARSR 159


>AE014298-127|AAN09033.1|  507|Drosophila melanogaster CG32815-PA
           protein.
          Length = 507

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 271 AAGCARSSTSGAHCSGTAGCARSSTSGAHTGRTARVPLAART 396
           +A   RS+T+G +   T+  + SSTS   T  TA  P +  T
Sbjct: 278 SASTTRSTTTGPNIVATSSSSSSSTSTTTTTTTAPAPTSTST 319


>AE014297-4313|AAF56852.1|  852|Drosophila melanogaster CG1401-PA
           protein.
          Length = 852

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 265 SRAAGCARSSTSGAHCSGTAGCARSSTSGAHTGRTARVPLAART 396
           S A+  A ++ +   CSG AG + +STS A    T+    AA T
Sbjct: 134 SGASTSAAAAAAATSCSGQAGKSGASTSAAAGASTSAAAAAAST 177


>AE014297-303|AAF51991.1|  725|Drosophila melanogaster CG1433-PA
           protein.
          Length = 725

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 28/91 (30%), Positives = 38/91 (41%)
 Frame = +1

Query: 265 SRAAGCARSSTSGAHCSGTAGCARSSTSGAHTGRTARVPLAARTXXXXXXXXXXXXXXXX 444
           S+ +G ARS  S +  S  +G ARS  SG     T   P + R+                
Sbjct: 75  SQLSGSARSKRSRSAHSRRSGSARSRKSG-----TPESPQSHRSGSLQSRKSGSPQSRRS 129

Query: 445 XXXCSRTAGCAHCLRAATCAHSRVPLPARAR 537
               SR +G  H  R+ + AHSR    AR+R
Sbjct: 130 GSPQSRKSGSTHSRRSGS-AHSRRSGSARSR 159


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,562,811
Number of Sequences: 53049
Number of extensions: 479491
Number of successful extensions: 2176
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2168
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)